RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 ENHOQ6UWT2 76 aa12□□□□□ -0.49
CDK11A-208ENST00000404249 KMT2BQ9UMN6 2715 aaPredicted RBP12□□□□□ -0.49
CDK11A-208ENST00000404249 NOTCH2Q04721 2471 aa11.98□□□□□ -0.49
CDK11A-208ENST00000404249 RPL18AQ02543 176 aaKnown RBP11.98□□□□□ -0.49
CDK11A-208ENST00000404249 COX7CP15954 63 aa11.98□□□□□ -0.49
CDK11A-208ENST00000404249 IGLV6-57P01721 117 aa11.97□□□□□ -0.49
CDK11A-208ENST00000404249 TENM1Q9UKZ4 2725 aa11.97□□□□□ -0.49
CDK11A-208ENST00000404249 GVQW2A0A096LPI5 108 aaPredicted RBP11.97□□□□□ -0.49
CDK11A-208ENST00000404249 LYPD5Q6UWN5 251 aa11.97□□□□□ -0.49
CDK11A-208ENST00000404249 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
CDK11A-208ENST00000404249 A0A087WVE0 104 aa11.96□□□□□ -0.49
CDK11A-208ENST00000404249 hADV29S1A0JD25 119 aa11.96□□□□□ -0.49
CDK11A-208ENST00000404249 NSD1Q96L73 2696 aaPredicted RBP11.96□□□□□ -0.5
CDK11A-208ENST00000404249 WFDC9Q8NEX5 89 aa11.95□□□□□ -0.5
CDK11A-208ENST00000404249 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
CDK11A-208ENST00000404249 WIPF1O43516 503 aa11.94□□□□□ -0.5
CDK11A-208ENST00000404249 SMIM20Q8N5G0 67 aa11.93□□□□□ -0.5
CDK11A-208ENST00000404249 OTOGQ6ZRI0 2925 aa11.93□□□□□ -0.5
CDK11A-208ENST00000404249 ZNF561-AS1K7EIQ3 104 aa11.92□□□□□ -0.5
CDK11A-208ENST00000404249 ATP5EP2Q5VTU8 51 aa11.92□□□□□ -0.5
CDK11A-208ENST00000404249 TRBV10-3A0A0K0K1G6 114 aa11.91□□□□□ -0.5
CDK11A-208ENST00000404249 XAGE1AQ9HD64 81 aa11.91□□□□□ -0.5
CDK11A-208ENST00000404249 HECTD1Q9ULT8 2610 aa11.91□□□□□ -0.5
CDK11A-208ENST00000404249 WFDC10BQ8IUB3 73 aa11.9□□□□□ -0.5
CDK11A-208ENST00000404249 TRAV23DV6A0A075B6W5 121 aa11.9□□□□□ -0.5
CDK11A-208ENST00000404249 RBM3P98179 157 aaKnown RBP11.9□□□□□ -0.5
CDK11A-208ENST00000404249 USP17L23D6RBM5 183 aa11.89□□□□□ -0.51
CDK11A-208ENST00000404249 Q6ZQT0 140 aa11.89□□□□□ -0.51
CDK11A-208ENST00000404249 LAMTOR3Q9UHA4 124 aa11.89□□□□□ -0.51
CDK11A-208ENST00000404249 CRYGAP11844 174 aa11.89□□□□□ -0.51
CDK11A-208ENST00000404249 HIVEP1P15822 2718 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 Q6ZQY7 126 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 DIRC1Q969H9 104 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 UBL5Q9BZL1 73 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 RETNQ9HD89 108 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 LOC110117498A0A087WWA1 95 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 HIGD2BQ4VC39 106 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
CDK11A-208ENST00000404249 ATRQ13535 2644 aa11.87□□□□□ -0.51
CDK11A-208ENST00000404249 TEP1Q99973 2627 aaKnown RBP11.86□□□□□ -0.51
CDK11A-208ENST00000404249 H3BNG1 76 aa11.86□□□□□ -0.51
CDK11A-208ENST00000404249 SERP2Q8N6R1 65 aa11.86□□□□□ -0.51
CDK11A-208ENST00000404249 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
CDK11A-208ENST00000404249 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
CDK11A-208ENST00000404249 TRRAPQ9Y4A5 3859 aa11.84□□□□□ -0.51
CDK11A-208ENST00000404249 H3BQ85 93 aa11.84□□□□□ -0.51
CDK11A-208ENST00000404249 ZNF73O43830 326 aaPredicted RBP11.84□□□□□ -0.51
CDK11A-208ENST00000404249 Q6ZTC4 211 aa11.83□□□□□ -0.52
CDK11A-208ENST00000404249 VPREB1P12018 145 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 COX7BP24311 80 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 EGFEM1PQ0D2K5 195 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 FAM19A1Q7Z5A9 133 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 DSCR8Q96T75 97 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 M0R2N4 97 aa11.81□□□□□ -0.52
CDK11A-208ENST00000404249 OXLD1Q5BKU9 147 aa11.81□□□□□ -0.52
CDK11A-208ENST00000404249 Q6ZRU5 148 aa11.81□□□□□ -0.52
CDK11A-208ENST00000404249 C15orf56Q8N910 161 aa11.81□□□□□ -0.52
CDK11A-208ENST00000404249 ELOF1P60002 83 aaKnown RBP11.81□□□□□ -0.52
CDK11A-208ENST00000404249 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.8□□□□□ -0.52
CDK11A-208ENST00000404249 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
CDK11A-208ENST00000404249 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
CDK11A-208ENST00000404249 CYSTM1Q9H1C7 97 aa11.8□□□□□ -0.52
CDK11A-208ENST00000404249 TRBV7-6A0A0J9YX20 115 aa11.79□□□□□ -0.52
CDK11A-208ENST00000404249 PDE6GP18545 87 aa11.78□□□□□ -0.52
CDK11A-208ENST00000404249 M0R378 163 aa11.78□□□□□ -0.52
CDK11A-208ENST00000404249 ESRGQ1W209 222 aa11.78□□□□□ -0.52
CDK11A-208ENST00000404249 NDUFC2-KCTD14E9PQ53 114 aa11.77□□□□□ -0.52
CDK11A-208ENST00000404249 GHRHP01286 108 aa11.77□□□□□ -0.52
CDK11A-208ENST00000404249 C1orf43Q9BWL3 253 aa11.76□□□□□ -0.53
CDK11A-208ENST00000404249 Q6ZVQ6 151 aa11.76□□□□□ -0.53
CDK11A-208ENST00000404249 LINC01547P58512 204 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-208ENST00000404249 TRBV7-4A0A0J9YYF1 115 aa11.74□□□□□ -0.53
CDK11A-208ENST00000404249 LINC01556Q5JQF7 62 aa11.73□□□□□ -0.53
CDK11A-208ENST00000404249 IGKV2D-24A0A075B6R9 120 aa11.72□□□□□ -0.53
CDK11A-208ENST00000404249 HAMPP81172 84 aa11.72□□□□□ -0.53
CDK11A-208ENST00000404249 Q6ZRP5 223 aa11.72□□□□□ -0.53
CDK11A-208ENST00000404249 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
CDK11A-208ENST00000404249 TMEM258P61165 79 aa11.7□□□□□ -0.54
CDK11A-208ENST00000404249 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
CDK11A-208ENST00000404249 F8WDY8 70 aa11.69□□□□□ -0.54
CDK11A-208ENST00000404249 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
CDK11A-208ENST00000404249 J3KT08 172 aa11.68□□□□□ -0.54
CDK11A-208ENST00000404249 CXCL6P80162 114 aa11.68□□□□□ -0.54
CDK11A-208ENST00000404249 C11orf45Q8TAV5 145 aa11.67□□□□□ -0.54
CDK11A-208ENST00000404249 LOC107984640A0A0U1RRK4 108 aa11.66□□□□□ -0.54
CDK11A-208ENST00000404249 PKD1L1Q8TDX9 2849 aa11.64□□□□□ -0.55
CDK11A-208ENST00000404249 BCE1O60756 84 aa11.64□□□□□ -0.55
CDK11A-208ENST00000404249 NKAPP1Q8N9T2 125 aa11.64□□□□□ -0.55
CDK11A-208ENST00000404249 DNAH10OSP0CZ25 163 aa11.62□□□□□ -0.55
CDK11A-208ENST00000404249 TENM3Q9P273 2699 aa11.62□□□□□ -0.55
CDK11A-208ENST00000404249 SERTAD4-AS1Q5TG53 156 aa11.62□□□□□ -0.55
CDK11A-208ENST00000404249 RPS28P62857 69 aaKnown RBP11.61□□□□□ -0.55
CDK11A-208ENST00000404249 KCNQ1DNQ9H478 68 aa11.61□□□□□ -0.55
CDK11A-208ENST00000404249 TRAV7A0A075B6U4 112 aa11.61□□□□□ -0.55
CDK11A-208ENST00000404249 SCXQ7RTU7 201 aa11.61□□□□□ -0.55
CDK11A-208ENST00000404249 KRTAP24-1Q3LI83 254 aa11.6□□□□□ -0.55
CDK11A-208ENST00000404249 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
CDK11A-208ENST00000404249 C7orf33Q8WU49 177 aa11.6□□□□□ -0.55
CDK11A-208ENST00000404249 TRAV10A0A0B4J240 114 aa11.6□□□□□ -0.55
CDK11A-208ENST00000404249 DPH3Q96FX2 82 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms