RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 K7EQZ3 153 aa5.57□□□□□ -1.52
SPTLC3-201ENST00000399002 C19orf73Q9NVV2 129 aa5.57□□□□□ -1.52
SPTLC3-201ENST00000399002 DSCAML1Q8TD84 2053 aa5.56□□□□□ -1.52
SPTLC3-201ENST00000399002 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
SPTLC3-201ENST00000399002 SERTAD4-AS1Q5TG53 156 aa5.56□□□□□ -1.52
SPTLC3-201ENST00000399002 C8orf17Q9NRJ1 99 aa5.56□□□□□ -1.52
SPTLC3-201ENST00000399002 IGFL1Q6UW32 110 aa5.55□□□□□ -1.52
SPTLC3-201ENST00000399002 WWC2-AS2Q96NR7 200 aa5.55□□□□□ -1.52
SPTLC3-201ENST00000399002 A0A1B0GVX0 72 aa5.55□□□□□ -1.52
SPTLC3-201ENST00000399002 UQCR11O14957 56 aa5.55□□□□□ -1.52
SPTLC3-201ENST00000399002 SPTBN1Q01082 2364 aaKnown RBP5.55□□□□□ -1.52
SPTLC3-201ENST00000399002 SPANXA2-OT1Q8N9U9 137 aa5.54□□□□□ -1.52
SPTLC3-201ENST00000399002 EP300Q09472 2414 aaPredicted RBP5.54□□□□□ -1.52
SPTLC3-201ENST00000399002 C15orf56Q8N910 161 aa5.54□□□□□ -1.52
SPTLC3-201ENST00000399002 CHTF8P0CG12 524 aa5.54□□□□□ -1.52
SPTLC3-201ENST00000399002 LINC01600Q96MT4 127 aa5.53□□□□□ -1.52
SPTLC3-201ENST00000399002 GPR179Q6PRD1 2367 aa5.53□□□□□ -1.52
SPTLC3-201ENST00000399002 IGLV5-37A0A075B6J1 123 aa5.53□□□□□ -1.52
SPTLC3-201ENST00000399002 NCOR1O75376 2440 aa5.52□□□□□ -1.53
SPTLC3-201ENST00000399002 ROS1P08922 2347 aa5.52□□□□□ -1.53
SPTLC3-201ENST00000399002 AKAP6Q13023 2319 aa5.52□□□□□ -1.53
SPTLC3-201ENST00000399002 FAM168BA1KXE4 195 aa5.52□□□□□ -1.53
SPTLC3-201ENST00000399002 ZNF861PO60384 105 aa5.52□□□□□ -1.53
SPTLC3-201ENST00000399002 AGRNO00468 2067 aa5.52□□□□□ -1.53
SPTLC3-201ENST00000399002 C9orf129Q5T035 196 aaKnown RBP5.5□□□□□ -1.53
SPTLC3-201ENST00000399002 TNCP24821 2201 aa5.5□□□□□ -1.53
SPTLC3-201ENST00000399002 CNBPP62633 177 aaKnown RBP5.5□□□□□ -1.53
SPTLC3-201ENST00000399002 HIVEP2P31629 2446 aa5.5□□□□□ -1.53
SPTLC3-201ENST00000399002 CNOT1A5YKK6 2376 aaKnown RBP5.5□□□□□ -1.53
SPTLC3-201ENST00000399002 A0A096LNT2 108 aa5.5□□□□□ -1.53
SPTLC3-201ENST00000399002 Q8N377 158 aa5.5□□□□□ -1.53
SPTLC3-201ENST00000399002 LINC00304Q8N9R0 145 aa5.49□□□□□ -1.53
SPTLC3-201ENST00000399002 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
SPTLC3-201ENST00000399002 OBSCN-AS1Q96MR7 158 aa5.49□□□□□ -1.53
SPTLC3-201ENST00000399002 EP400Q96L91 3159 aa5.49□□□□□ -1.53
SPTLC3-201ENST00000399002 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
SPTLC3-201ENST00000399002 PRRC2AP48634 2157 aaKnown RBP5.48□□□□□ -1.53
SPTLC3-201ENST00000399002 KRTAP10-11P60412 298 aa5.47□□□□□ -1.53
SPTLC3-201ENST00000399002 CD164Q04900 197 aa5.47□□□□□ -1.53
SPTLC3-201ENST00000399002 ABCA1O95477 2261 aa5.47□□□□□ -1.53
SPTLC3-201ENST00000399002 A8MUN3 132 aa5.47□□□□□ -1.53
SPTLC3-201ENST00000399002 DSCR10P59022 87 aa5.47□□□□□ -1.53
SPTLC3-201ENST00000399002 H7BZZ5 65 aa5.46□□□□□ -1.53
SPTLC3-201ENST00000399002 ARHGAP32A7KAX9 2087 aa5.46□□□□□ -1.54
SPTLC3-201ENST00000399002 GIG44P09565 113 aaPredicted RBP5.46□□□□□ -1.54
SPTLC3-201ENST00000399002 LINC00336Q6ZUF6 198 aa5.46□□□□□ -1.54
SPTLC3-201ENST00000399002 C9orf163Q8N9P6 203 aa5.46□□□□□ -1.54
SPTLC3-201ENST00000399002 ANKHD1Q8IWZ3 2542 aaKnown RBP5.45□□□□□ -1.54
SPTLC3-201ENST00000399002 FAM104AQ969W3 186 aa5.45□□□□□ -1.54
SPTLC3-201ENST00000399002 A0A087WTM6 91 aa5.45□□□□□ -1.54
SPTLC3-201ENST00000399002 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
SPTLC3-201ENST00000399002 IGLV7-43P04211 117 aa5.44□□□□□ -1.54
SPTLC3-201ENST00000399002 KTN1-AS1Q86SY8 53 aa5.44□□□□□ -1.54
SPTLC3-201ENST00000399002 SPRR4Q96PI1 79 aa5.44□□□□□ -1.54
SPTLC3-201ENST00000399002 K7EIL1 84 aa5.44□□□□□ -1.54
SPTLC3-201ENST00000399002 IGLV5-48A0A075B6I7 105 aa5.43□□□□□ -1.54
SPTLC3-201ENST00000399002 PCNX1Q96RV3 2341 aa5.42□□□□□ -1.54
SPTLC3-201ENST00000399002 ZNF575Q86XF7 245 aa5.42□□□□□ -1.54
SPTLC3-201ENST00000399002 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
SPTLC3-201ENST00000399002 PLXNB1O43157 2135 aa5.42□□□□□ -1.54
SPTLC3-201ENST00000399002 LCA10Q71F78 164 aa5.42□□□□□ -1.54
SPTLC3-201ENST00000399002 PLCE1Q9P212 2302 aa5.42□□□□□ -1.54
SPTLC3-201ENST00000399002 APLNQ9ULZ1 77 aa5.41□□□□□ -1.54
SPTLC3-201ENST00000399002 KRTAP10-3P60369 221 aa5.41□□□□□ -1.54
SPTLC3-201ENST00000399002 NAV3Q8IVL0 2385 aa5.41□□□□□ -1.54
SPTLC3-201ENST00000399002 Q1T7F1 81 aa5.4□□□□□ -1.54
SPTLC3-201ENST00000399002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.4□□□□□ -1.547e-8■■■□□ 18.9
SPTLC3-201ENST00000399002 RBM12B-AS1Q9P1G2 102 aa5.4□□□□□ -1.54
SPTLC3-201ENST00000399002 IGLV8-61A0A075B6I0 122 aa5.4□□□□□ -1.55
SPTLC3-201ENST00000399002 CACNA1GO43497 2377 aa5.4□□□□□ -1.55
SPTLC3-201ENST00000399002 EIF4EBP3O60516 100 aaPredicted RBP5.4□□□□□ -1.55
SPTLC3-201ENST00000399002 J3QL48 77 aa5.39□□□□□ -1.55
SPTLC3-201ENST00000399002 A0A1W2PNM2 257 aa5.38□□□□□ -1.55
SPTLC3-201ENST00000399002 SPTAN1Q13813 2472 aaKnown RBP5.37□□□□□ -1.55
SPTLC3-201ENST00000399002 SPTBN2O15020 2390 aa5.36□□□□□ -1.55
SPTLC3-201ENST00000399002 A0A1W2PNN7 141 aa5.36□□□□□ -1.55
SPTLC3-201ENST00000399002 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
SPTLC3-201ENST00000399002 CACNA1HO95180 2353 aa5.35□□□□□ -1.55
SPTLC3-201ENST00000399002 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
SPTLC3-201ENST00000399002 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.55
SPTLC3-201ENST00000399002 FAM229BQ4G0N7 80 aa5.34□□□□□ -1.55
SPTLC3-201ENST00000399002 WIPF1O43516 503 aa5.34□□□□□ -1.56
SPTLC3-201ENST00000399002 IGLV7-46A0A075B6I9 117 aa5.33□□□□□ -1.56
SPTLC3-201ENST00000399002 KRTAP1-3Q8IUG1 177 aa5.33□□□□□ -1.56
SPTLC3-201ENST00000399002 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
SPTLC3-201ENST00000399002 Q75L30 129 aa5.32□□□□□ -1.56
SPTLC3-201ENST00000399002 OTOGLQ3ZCN5 2332 aa5.32□□□□□ -1.56
SPTLC3-201ENST00000399002 ZFHX2Q9C0A1 2572 aaPredicted RBP5.32□□□□□ -1.56
SPTLC3-201ENST00000399002 MUC6Q6W4X9 2439 aa5.32□□□□□ -1.56
SPTLC3-201ENST00000399002 RIF1Q5UIP0 2472 aaKnown RBP5.32□□□□□ -1.56
SPTLC3-201ENST00000399002 GVINP1Q7Z2Y8 2422 aa5.3□□□□□ -1.56
SPTLC3-201ENST00000399002 PTPRQQ9UMZ3 2332 aa5.29□□□□□ -1.56
SPTLC3-201ENST00000399002 KRTAP1-1Q07627 177 aa5.28□□□□□ -1.56
SPTLC3-201ENST00000399002 CASC10Q5T4H9 136 aa5.27□□□□□ -1.57
SPTLC3-201ENST00000399002 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
SPTLC3-201ENST00000399002 SPRR1AP35321 89 aa5.25□□□□□ -1.57
SPTLC3-201ENST00000399002 A0A0G2JQZ4 141 aa5.25□□□□□ -1.57
SPTLC3-201ENST00000399002 PLAC8Q9NZF1 115 aa5.24□□□□□ -1.57
SPTLC3-201ENST00000399002 SPRR1BP22528 89 aa5.24□□□□□ -1.57
SPTLC3-201ENST00000399002 DOPEY2Q9Y3R5 2298 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms