RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 DHRS4-AS1Q9P1J3 65 aa5.62□□□□□ -1.51
PTPRD-204ENST00000397606 CELSR2Q9HCU4 2923 aa5.62□□□□□ -1.51
PTPRD-204ENST00000397606 RPL37AP8A6NKH3 93 aa5.62□□□□□ -1.51
PTPRD-204ENST00000397606 C4orf48Q5BLP8 95 aa5.62□□□□□ -1.51
PTPRD-204ENST00000397606 ZNF575Q86XF7 245 aa5.62□□□□□ -1.51
PTPRD-204ENST00000397606 TCL1BO95988 128 aa5.61□□□□□ -1.51
PTPRD-204ENST00000397606 TRACP01848 142 aa5.61□□□□□ -1.51
PTPRD-204ENST00000397606 SMIM11BQ8TCY0 68 aa5.61□□□□□ -1.51
PTPRD-204ENST00000397606 PRR34Q9NV39 138 aa5.6□□□□□ -1.51
PTPRD-204ENST00000397606 RBM3P98179 157 aaKnown RBP5.6□□□□□ -1.51
PTPRD-204ENST00000397606 PDE6GP18545 87 aa5.6□□□□□ -1.51
PTPRD-204ENST00000397606 C9orf153Q5TBE3 101 aa5.6□□□□□ -1.51
PTPRD-204ENST00000397606 TEN1Q86WV5 123 aa5.6□□□□□ -1.51
PTPRD-204ENST00000397606 UPK3BQ9BT76 320 aa5.6□□□□□ -1.51
PTPRD-204ENST00000397606 CRYBG3Q68DQ2 2970 aa5.59□□□□□ -1.51
PTPRD-204ENST00000397606 HIST1H4AP62805 103 aaKnown RBP5.59□□□□□ -1.51
PTPRD-204ENST00000397606 APLNQ9ULZ1 77 aa5.59□□□□□ -1.51
PTPRD-204ENST00000397606 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-204ENST00000397606 GVQW2A0A096LPI5 108 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-204ENST00000397606 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.51
PTPRD-204ENST00000397606 LRCOL1A6NCL2 159 aa5.59□□□□□ -1.51
PTPRD-204ENST00000397606 HAMPP81172 84 aa5.59□□□□□ -1.51
PTPRD-204ENST00000397606 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.52
PTPRD-204ENST00000397606 C6orf48Q9UBA6 75 aa5.58□□□□□ -1.52
PTPRD-204ENST00000397606 A0A1B0GX51 115 aa5.58□□□□□ -1.52
PTPRD-204ENST00000397606 MRPL55Q7Z7F7 128 aaKnown RBP5.58□□□□□ -1.52
PTPRD-204ENST00000397606 SIGMAR1Q99720 223 aa5.58□□□□□ -1.52
PTPRD-204ENST00000397606 ACYP1P07311 99 aa5.58□□□□□ -1.52
PTPRD-204ENST00000397606 RPL28P46779 137 aaKnown RBP5.57□□□□□ -1.52
PTPRD-204ENST00000397606 PRR3P79522 188 aaKnown RBP5.57□□□□□ -1.52
PTPRD-204ENST00000397606 WFDC2Q14508 124 aa5.57□□□□□ -1.52
PTPRD-204ENST00000397606 REG3GQ6UW15 175 aa5.57□□□□□ -1.52
PTPRD-204ENST00000397606 Q6ZQY7 126 aa5.57□□□□□ -1.52
PTPRD-204ENST00000397606 LAMA5O15230 3695 aa5.57□□□□□ -1.52
PTPRD-204ENST00000397606 C10orf25Q5T742 122 aa5.56□□□□□ -1.52
PTPRD-204ENST00000397606 LST1O00453 97 aa5.56□□□□□ -1.52
PTPRD-204ENST00000397606 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-204ENST00000397606 PRYO14603 147 aa5.55□□□□□ -1.52
PTPRD-204ENST00000397606 SLPIP03973 132 aa5.55□□□□□ -1.52
PTPRD-204ENST00000397606 PCP4P48539 62 aa5.55□□□□□ -1.52
PTPRD-204ENST00000397606 KRTAP21-3Q3LHN1 58 aa5.55□□□□□ -1.52
PTPRD-204ENST00000397606 RTL8CO15255 209 aa5.55□□□□□ -1.52
PTPRD-204ENST00000397606 C22orf24Q9Y442 160 aa5.55□□□□□ -1.52
PTPRD-204ENST00000397606 TENM4Q6N022 2769 aa5.54□□□□□ -1.52
PTPRD-204ENST00000397606 NREPQ16612 68 aa5.54□□□□□ -1.52
PTPRD-204ENST00000397606 DCHS2Q6V1P9 2916 aa5.54□□□□□ -1.52
PTPRD-204ENST00000397606 A0A096LNI7 61 aa5.54□□□□□ -1.52
PTPRD-204ENST00000397606 RELNP78509 3460 aa5.54□□□□□ -1.52
PTPRD-204ENST00000397606 WDFY3Q8IZQ1 3526 aa5.53□□□□□ -1.52
PTPRD-204ENST00000397606 ASH1LQ9NR48 2969 aaKnown RBP5.53□□□□□ -1.52
PTPRD-204ENST00000397606 C16orf90A8MZG2 172 aa5.53□□□□□ -1.52
PTPRD-204ENST00000397606 NDUFB1O75438 58 aa5.52□□□□□ -1.53
PTPRD-204ENST00000397606 C1orf137Q5JT78 98 aa5.52□□□□□ -1.53
PTPRD-204ENST00000397606 LINC00337Q8N6G1 96 aa5.52□□□□□ -1.53
PTPRD-204ENST00000397606 PPDPFQ9H3Y8 114 aa5.52□□□□□ -1.53
PTPRD-204ENST00000397606 C14orf132Q9NPU4 83 aa5.52□□□□□ -1.53
PTPRD-204ENST00000397606 NBEAL1Q6ZS30 2694 aa5.52□□□□□ -1.53
PTPRD-204ENST00000397606 ASPMQ8IZT6 3477 aa5.51□□□□□ -1.53
PTPRD-204ENST00000397606 FBN2P35556 2912 aa5.51□□□□□ -1.53
PTPRD-204ENST00000397606 Q8N814 137 aa5.51□□□□□ -1.53
PTPRD-204ENST00000397606 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
PTPRD-204ENST00000397606 C15orf56Q8N910 161 aa5.5□□□□□ -1.53
PTPRD-204ENST00000397606 KIAA0087Q14695 138 aa5.5□□□□□ -1.53
PTPRD-204ENST00000397606 LINC00476Q8WZB0 136 aa5.49□□□□□ -1.53
PTPRD-204ENST00000397606 SOSTDC1Q6X4U4 206 aa5.49□□□□□ -1.53
PTPRD-204ENST00000397606 NIPBLQ6KC79 2804 aaeCLIP5.49□□□□□ -1.53
PTPRD-204ENST00000397606 A0A087WTM6 91 aa5.49□□□□□ -1.53
PTPRD-204ENST00000397606 CASC10Q5T4H9 136 aa5.49□□□□□ -1.53
PTPRD-204ENST00000397606 Q6ZRP5 223 aa5.49□□□□□ -1.53
PTPRD-204ENST00000397606 TEX49A0A1B0GTD5 131 aa5.48□□□□□ -1.53
PTPRD-204ENST00000397606 NBEAL2Q6ZNJ1 2754 aa5.48□□□□□ -1.53
PTPRD-204ENST00000397606 CCKP06307 115 aa5.48□□□□□ -1.53
PTPRD-204ENST00000397606 NDUFV3P56181 108 aaKnown RBP5.48□□□□□ -1.53
PTPRD-204ENST00000397606 LINC00575Q6W349 94 aa5.47□□□□□ -1.53
PTPRD-204ENST00000397606 LINC00336Q6ZUF6 198 aa5.47□□□□□ -1.53
PTPRD-204ENST00000397606 IGLV9-49A0A0B4J1Y8 123 aa5.47□□□□□ -1.53
PTPRD-204ENST00000397606 SS18L2Q9UHA2 77 aa5.47□□□□□ -1.53
PTPRD-204ENST00000397606 A0A087WYN8 130 aa5.47□□□□□ -1.53
PTPRD-204ENST00000397606 PRLHP81277 87 aa5.47□□□□□ -1.53
PTPRD-204ENST00000397606 LITAFQ99732 161 aa5.47□□□□□ -1.53
PTPRD-204ENST00000397606 C9orf163Q8N9P6 203 aa5.46□□□□□ -1.54
PTPRD-204ENST00000397606 ANAPC13Q9BS18 74 aa5.46□□□□□ -1.54
PTPRD-204ENST00000397606 TRBV7-6A0A0J9YX20 115 aa5.46□□□□□ -1.54
PTPRD-204ENST00000397606 CHTF8P0CG12 524 aa5.46□□□□□ -1.54
PTPRD-204ENST00000397606 PHF5AQ7RTV0 110 aaKnown RBP5.45□□□□□ -1.54
PTPRD-204ENST00000397606 BPY2O14599 106 aa5.45□□□□□ -1.54
PTPRD-204ENST00000397606 VPREB1P12018 145 aa5.45□□□□□ -1.54
PTPRD-204ENST00000397606 PDZD2O15018 2839 aa5.45□□□□□ -1.54
PTPRD-204ENST00000397606 NF1P21359 2839 aa5.45□□□□□ -1.54
PTPRD-204ENST00000397606 TLX1NBP0CAT3 122 aa5.44□□□□□ -1.54
PTPRD-204ENST00000397606 CNBPP62633 177 aaKnown RBP5.44□□□□□ -1.54
PTPRD-204ENST00000397606 SMCR5Q8TEV8 140 aa5.44□□□□□ -1.54
PTPRD-204ENST00000397606 H0Y9J4 135 aa5.44□□□□□ -1.54
PTPRD-204ENST00000397606 Q6JHZ5 121 aa5.44□□□□□ -1.54
PTPRD-204ENST00000397606 NDUFS5O43920 106 aa5.43□□□□□ -1.54
PTPRD-204ENST00000397606 ZFHX4Q86UP3 3567 aa5.43□□□□□ -1.54
PTPRD-204ENST00000397606 IGKV3D-7A0A0C4DH55 119 aa5.43□□□□□ -1.54
PTPRD-204ENST00000397606 LINC00643Q86TS7 51 aa5.43□□□□□ -1.54
PTPRD-204ENST00000397606 Q9BRP9 147 aa5.43□□□□□ -1.54
PTPRD-204ENST00000397606 FAM229AH3BQW9 127 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms