RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PLNP26678 52 aa18.45■□□□□ 0.54
CMTM4-202ENST00000394106 MEIG1Q5JSS6 88 aa18.45■□□□□ 0.54
CMTM4-202ENST00000394106 Q8NDZ9 215 aa18.45■□□□□ 0.54
CMTM4-202ENST00000394106 IGLV1-50A0A075B6I6 118 aa18.44■□□□□ 0.54
CMTM4-202ENST00000394106 SMIM13P0DJ93 91 aa18.44■□□□□ 0.54
CMTM4-202ENST00000394106 PMCHL2Q9BQD1 86 aa18.44■□□□□ 0.54
CMTM4-202ENST00000394106 ATP6V1G1O75348 118 aa18.43■□□□□ 0.54
CMTM4-202ENST00000394106 NDUFA12Q9UI09 145 aa18.43■□□□□ 0.54
CMTM4-202ENST00000394106 HERV-K104P63124 156 aa18.42■□□□□ 0.54
CMTM4-202ENST00000394106 DPM2O94777 84 aa18.41■□□□□ 0.54
CMTM4-202ENST00000394106 UBE2AP49459 152 aa18.41■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BKO60814 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BJP06899 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BOP23527 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BBP33778 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BDP58876 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BCP62807 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST2H2BEQ16778 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BHQ93079 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BNQ99877 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 HIST1H2BMQ99879 126 aa18.4■□□□□ 0.54
CMTM4-202ENST00000394106 MYMXA0A1B0GTQ4 84 aa18.39■□□□□ 0.53
CMTM4-202ENST00000394106 MAP1LC3CQ9BXW4 147 aa18.39■□□□□ 0.53
CMTM4-202ENST00000394106 LEPROTO15243 131 aa18.38■□□□□ 0.53
CMTM4-202ENST00000394106 TSPEAR-AS2P59090 65 aa18.38■□□□□ 0.53
CMTM4-202ENST00000394106 IGKCP01834 107 aa18.37■□□□□ 0.53
CMTM4-202ENST00000394106 PLEKHB2Q96CS7 222 aa18.37■□□□□ 0.53
CMTM4-202ENST00000394106 TMEM238C9JI98 176 aa18.36■□□□□ 0.53
CMTM4-202ENST00000394106 HERVK_113P61574 105 aa18.36■□□□□ 0.53
CMTM4-202ENST00000394106 MIR7-3HGQ8N6C7 128 aa18.36■□□□□ 0.53
CMTM4-202ENST00000394106 RPL13AP40429 203 aaKnown RBP18.35■□□□□ 0.53
CMTM4-202ENST00000394106 LINC00587B1AMM8 73 aa18.34■□□□□ 0.53
CMTM4-202ENST00000394106 KRTAP13-1Q8IUC0 172 aa18.34■□□□□ 0.53
CMTM4-202ENST00000394106 TMEM126AQ9H061 195 aa18.34■□□□□ 0.53
CMTM4-202ENST00000394106 BOD1L2Q8IYS8 172 aa18.33■□□□□ 0.52
CMTM4-202ENST00000394106 J3QQQ9 107 aa18.32■□□□□ 0.52
CMTM4-202ENST00000394106 FAM19A1Q7Z5A9 133 aa18.32■□□□□ 0.52
CMTM4-202ENST00000394106 PRLHP81277 87 aa18.31■□□□□ 0.52
CMTM4-202ENST00000394106 M0R378 163 aa18.3■□□□□ 0.52
CMTM4-202ENST00000394106 LGALS3P17931 250 aaKnown RBP18.29■□□□□ 0.52
CMTM4-202ENST00000394106 NCR3O14931 201 aa18.27■□□□□ 0.52
CMTM4-202ENST00000394106 SYS1-DBNDD2H3BUS1 97 aa18.26■□□□□ 0.51
CMTM4-202ENST00000394106 DAND5Q8N907 189 aa18.25■□□□□ 0.51
CMTM4-202ENST00000394106 NMUP48645 174 aa18.24■□□□□ 0.51
CMTM4-202ENST00000394106 ANAPC11Q9NYG5 84 aa18.24■□□□□ 0.51
CMTM4-202ENST00000394106 A0A087X002 238 aa18.23■□□□□ 0.51
CMTM4-202ENST00000394106 CRYGAP11844 174 aa18.22■□□□□ 0.51
CMTM4-202ENST00000394106 IGKV2D-26A0A0A0MRZ7 120 aa18.18■□□□□ 0.5
CMTM4-202ENST00000394106 E9PLD3 99 aa18.18■□□□□ 0.5
CMTM4-202ENST00000394106 LINC01545Q5VT33 79 aa18.16■□□□□ 0.5
CMTM4-202ENST00000394106 TYMSOSQ8TAI1 123 aa18.16■□□□□ 0.5
CMTM4-202ENST00000394106 PRYO14603 147 aa18.15■□□□□ 0.5
CMTM4-202ENST00000394106 PET117Q6UWS5 81 aa18.15■□□□□ 0.5
CMTM4-202ENST00000394106 HIGD2AQ9BW72 106 aa18.15■□□□□ 0.5
CMTM4-202ENST00000394106 MIEN1Q9BRT3 115 aa18.14■□□□□ 0.49
CMTM4-202ENST00000394106 LOC107984156A0A0G2JMH3 177 aa18.13■□□□□ 0.49
CMTM4-202ENST00000394106 TRBV10-3A0A0K0K1G6 114 aa18.13■□□□□ 0.49
CMTM4-202ENST00000394106 ARL17AQ8IVW1 177 aa18.13■□□□□ 0.49
CMTM4-202ENST00000394106 LRP2P98164 4655 aa18.13■□□□□ 0.49
CMTM4-202ENST00000394106 COA6Q5JTJ3 125 aaKnown RBP18.12■□□□□ 0.49
CMTM4-202ENST00000394106 A0A0J9YXY3 114 aa18.11■□□□□ 0.49
CMTM4-202ENST00000394106 C3orf79P0CE67 100 aa18.11■□□□□ 0.49
CMTM4-202ENST00000394106 FAM229BQ4G0N7 80 aa18.11■□□□□ 0.49
CMTM4-202ENST00000394106 KCNQ1DNQ9H478 68 aa18.11■□□□□ 0.49
CMTM4-202ENST00000394106 KRTAP13-2Q52LG2 175 aa18.1■□□□□ 0.49
CMTM4-202ENST00000394106 KRTDAPP60985 99 aa18.09■□□□□ 0.49
CMTM4-202ENST00000394106 TSPAN13O95857 204 aa18.08■□□□□ 0.48
CMTM4-202ENST00000394106 NPC2P61916 151 aa18.08■□□□□ 0.48
CMTM4-202ENST00000394106 ADAMTSL4-AS1Q5T5F5 129 aa18.07■□□□□ 0.48
CMTM4-202ENST00000394106 ETDCA0A1B0GVM5 59 aa18.06■□□□□ 0.48
CMTM4-202ENST00000394106 SPRR1AP35321 89 aa18.06■□□□□ 0.48
CMTM4-202ENST00000394106 S100A12P80511 92 aa18.06■□□□□ 0.48
CMTM4-202ENST00000394106 LINC00337Q8N6G1 96 aa18.06■□□□□ 0.48
CMTM4-202ENST00000394106 TRBV10-2A0A0K0K1G8 114 aa18.05■□□□□ 0.48
CMTM4-202ENST00000394106 DDTP30046 118 aa18.05■□□□□ 0.48
CMTM4-202ENST00000394106 SPANXB1Q9NS25 103 aaPredicted RBP18.05■□□□□ 0.48
CMTM4-202ENST00000394106 SOSTDC1Q6X4U4 206 aa18.03■□□□□ 0.48
CMTM4-202ENST00000394106 KRTAP4-16G5E9R7 235 aaPredicted RBP18.01■□□□□ 0.47
CMTM4-202ENST00000394106 EIF4EBP3O60516 100 aaPredicted RBP18.01■□□□□ 0.47
CMTM4-202ENST00000394106 NDUFC2O95298 119 aa18.01■□□□□ 0.47
CMTM4-202ENST00000394106 PRR4Q16378 134 aa18■□□□□ 0.47
CMTM4-202ENST00000394106 S100A7L2Q5SY68 101 aa18■□□□□ 0.47
CMTM4-202ENST00000394106 ZNF815PA8K554 130 aa17.99■□□□□ 0.47
CMTM4-202ENST00000394106 SPRR4Q96PI1 79 aa17.99■□□□□ 0.47
CMTM4-202ENST00000394106 TTTY13Q9BZ97 58 aa17.98■□□□□ 0.47
CMTM4-202ENST00000394106 C20orf202A1L168 122 aa17.97■□□□□ 0.47
CMTM4-202ENST00000394106 SMCR5Q8TEV8 140 aa17.97■□□□□ 0.47
CMTM4-202ENST00000394106 ZNF706Q9Y5V0 76 aaPredicted RBP17.97■□□□□ 0.47
CMTM4-202ENST00000394106 LITAFQ99732 161 aa17.96■□□□□ 0.47
CMTM4-202ENST00000394106 LINC00304Q8N9R0 145 aa17.95■□□□□ 0.46
CMTM4-202ENST00000394106 B5MCH6 92 aa17.94■□□□□ 0.46
CMTM4-202ENST00000394106 TIMM17BO60830 172 aa17.94■□□□□ 0.46
CMTM4-202ENST00000394106 S100A1P23297 94 aa17.94■□□□□ 0.46
CMTM4-202ENST00000394106 C3orf22Q8N5N4 141 aa17.94■□□□□ 0.46
CMTM4-202ENST00000394106 IGLV6-57P01721 117 aa17.93■□□□□ 0.46
CMTM4-202ENST00000394106 LINC00308Q8TCZ7 52 aa17.93■□□□□ 0.46
CMTM4-202ENST00000394106 ATOH7Q8N100 152 aa17.91■□□□□ 0.46
CMTM4-202ENST00000394106 TRAV23DV6A0A075B6W5 121 aa17.89■□□□□ 0.45
CMTM4-202ENST00000394106 PPDPFQ9H3Y8 114 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms