RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 STAB2Q8WWQ8 2551 aa3.33□□□□□ -1.88
TRAV35-201ENST00000390462 KIAA1109Q2LD37 5005 aa3.32□□□□□ -1.88
TRAV35-201ENST00000390462 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
TRAV35-201ENST00000390462 DOCK11Q5JSL3 2073 aa3.32□□□□□ -1.88
TRAV35-201ENST00000390462 TRBV10-1A0A0K0K1A3 114 aa3.31□□□□□ -1.88
TRAV35-201ENST00000390462 LYNX1G3V0Z9 82 aa3.31□□□□□ -1.88
TRAV35-201ENST00000390462 GNGT2O14610 69 aa3.31□□□□□ -1.88
TRAV35-201ENST00000390462 CCKP06307 115 aa3.31□□□□□ -1.88
TRAV35-201ENST00000390462 LYNX1P0DP58 116 aa3.31□□□□□ -1.88
TRAV35-201ENST00000390462 LINC00299Q6ZSB3 139 aa3.31□□□□□ -1.88
TRAV35-201ENST00000390462 NDUFA11Q86Y39 141 aa3.31□□□□□ -1.88
TRAV35-201ENST00000390462 TXNDC17Q9BRA2 123 aa3.31□□□□□ -1.88
TRAV35-201ENST00000390462 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
TRAV35-201ENST00000390462 LCE6AA0A183 80 aa3.3□□□□□ -1.88
TRAV35-201ENST00000390462 TRBV6-4A0A1B0GX49 114 aa3.3□□□□□ -1.88
TRAV35-201ENST00000390462 RNASE3P12724 160 aaKnown RBP3.3□□□□□ -1.88
TRAV35-201ENST00000390462 HCP5Q6MZN7 132 aa3.3□□□□□ -1.88
TRAV35-201ENST00000390462 C10orf82Q8WW14 230 aa3.3□□□□□ -1.88
TRAV35-201ENST00000390462 LIMD2Q9BT23 127 aa3.3□□□□□ -1.88
TRAV35-201ENST00000390462 A0A0J9YY99 117 aa3.29□□□□□ -1.88
TRAV35-201ENST00000390462 CLPSL1A2RUU4 121 aa3.29□□□□□ -1.88
TRAV35-201ENST00000390462 NUPR2A6NF83 97 aa3.29□□□□□ -1.88
TRAV35-201ENST00000390462 K7EIL1 84 aa3.29□□□□□ -1.88
TRAV35-201ENST00000390462 IFI27L1Q96BM0 104 aa3.29□□□□□ -1.88
TRAV35-201ENST00000390462 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
TRAV35-201ENST00000390462 MRPL36Q9P0J6 103 aaKnown RBP3.29□□□□□ -1.88
TRAV35-201ENST00000390462 PLECQ15149 4684 aaKnown RBP3.28□□□□□ -1.88
TRAV35-201ENST00000390462 ODF3Q96PU9 254 aa3.28□□□□□ -1.88
TRAV35-201ENST00000390462 PMCHL2Q9BQD1 86 aa3.28□□□□□ -1.88
TRAV35-201ENST00000390462 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
TRAV35-201ENST00000390462 KLK9Q9UKQ9 250 aa3.28□□□□□ -1.88
TRAV35-201ENST00000390462 TRAV12-3A0A0B4J271 114 aa3.27□□□□□ -1.89
TRAV35-201ENST00000390462 HCG22E2RYF7 251 aa3.27□□□□□ -1.89
TRAV35-201ENST00000390462 NUPR1O60356 82 aa3.27□□□□□ -1.89
TRAV35-201ENST00000390462 CCL8P80075 99 aa3.27□□□□□ -1.89
TRAV35-201ENST00000390462 NPVFQ9HCQ7 196 aa3.27□□□□□ -1.89
TRAV35-201ENST00000390462 DYNLRB1Q9NP97 96 aa3.27□□□□□ -1.89
TRAV35-201ENST00000390462 LINC00474Q9P2X8 69 aa3.27□□□□□ -1.89
TRAV35-201ENST00000390462 A0A1B0GVY2 172 aa3.26□□□□□ -1.89
TRAV35-201ENST00000390462 hADV29S1A0JD25 119 aa3.26□□□□□ -1.89
TRAV35-201ENST00000390462 PPYP01298 95 aa3.26□□□□□ -1.89
TRAV35-201ENST00000390462 DEFB121Q5J5C9 76 aa3.26□□□□□ -1.89
TRAV35-201ENST00000390462 C15orf53Q8NAA6 179 aa3.26□□□□□ -1.89
TRAV35-201ENST00000390462 DEFB108BQ8NET1 73 aa3.26□□□□□ -1.89
TRAV35-201ENST00000390462 MYOZ3Q8TDC0 251 aa3.26□□□□□ -1.89
TRAV35-201ENST00000390462 IGLV3-32A0A0A0MS00 114 aa3.25□□□□□ -1.89
TRAV35-201ENST00000390462 ASIPP42127 132 aa3.25□□□□□ -1.89
TRAV35-201ENST00000390462 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
TRAV35-201ENST00000390462 GNG11P61952 73 aa3.25□□□□□ -1.89
TRAV35-201ENST00000390462 COA5Q86WW8 74 aa3.25□□□□□ -1.89
TRAV35-201ENST00000390462 CYP4F30PQ9H0H9 118 aa3.25□□□□□ -1.89
TRAV35-201ENST00000390462 BET1LQ9NYM9 111 aa3.25□□□□□ -1.89
TRAV35-201ENST00000390462 HUWE1Q7Z6Z7 4374 aaKnown RBP3.25□□□□□ -1.89
TRAV35-201ENST00000390462 ALMS1Q8TCU4 4167 aa3.24□□□□□ -1.89
TRAV35-201ENST00000390462 IGKV3-7A0A075B6H7 116 aa3.24□□□□□ -1.89
TRAV35-201ENST00000390462 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
TRAV35-201ENST00000390462 H3BQF6 201 aa3.24□□□□□ -1.89
TRAV35-201ENST00000390462 IGHV3-30P01768 117 aa3.24□□□□□ -1.89
TRAV35-201ENST00000390462 IGHV3-30-5P0DP03 117 aa3.24□□□□□ -1.89
TRAV35-201ENST00000390462 KRTDAPP60985 99 aa3.24□□□□□ -1.89
TRAV35-201ENST00000390462 DEFB112Q30KQ8 113 aa3.24□□□□□ -1.89
TRAV35-201ENST00000390462 NAP1L6A6NFF2 107 aa3.23□□□□□ -1.89
TRAV35-201ENST00000390462 SIX6O95475 246 aa3.23□□□□□ -1.89
TRAV35-201ENST00000390462 TRBV6-5A0A0K0K1A5 114 aa3.22□□□□□ -1.89
TRAV35-201ENST00000390462 IGLV3-1P01715 115 aa3.22□□□□□ -1.89
TRAV35-201ENST00000390462 GYPAP02724 150 aa3.22□□□□□ -1.89
TRAV35-201ENST00000390462 PDE6GP18545 87 aa3.22□□□□□ -1.89
TRAV35-201ENST00000390462 BRD3OSQ6XYD6 125 aa3.22□□□□□ -1.89
TRAV35-201ENST00000390462 HERC1Q15751 4861 aa3.22□□□□□ -1.89
TRAV35-201ENST00000390462 TRBV7-1A0A0A6YYK4 115 aa3.21□□□□□ -1.9
TRAV35-201ENST00000390462 ATOX1O00244 68 aa3.21□□□□□ -1.9
TRAV35-201ENST00000390462 MRPL33O75394 65 aaKnown RBP3.21□□□□□ -1.9
TRAV35-201ENST00000390462 MPV17LQ2QL34 196 aa3.21□□□□□ -1.9
TRAV35-201ENST00000390462 ZNF818PQ6ZRF7 136 aa3.21□□□□□ -1.9
TRAV35-201ENST00000390462 KMT2AQ03164 3969 aa3.2□□□□□ -1.9
TRAV35-201ENST00000390462 K7EP34 96 aa3.2□□□□□ -1.9
TRAV35-201ENST00000390462 IGKV1-17P01599 117 aa3.2□□□□□ -1.9
TRAV35-201ENST00000390462 UBE2D1P51668 147 aa3.2□□□□□ -1.9
TRAV35-201ENST00000390462 SEC11AP67812 179 aa3.2□□□□□ -1.9
TRAV35-201ENST00000390462 FAM213BQ8TBF2 198 aa3.2□□□□□ -1.9
TRAV35-201ENST00000390462 TRAV23DV6A0A075B6W5 121 aa3.19□□□□□ -1.9
TRAV35-201ENST00000390462 TRBV7-7A0A0K0K1E9 115 aa3.19□□□□□ -1.9
TRAV35-201ENST00000390462 Q6ZRN7 208 aaPredicted RBP3.19□□□□□ -1.9
TRAV35-201ENST00000390462 WFDC10AQ9H1F0 79 aa3.19□□□□□ -1.9
TRAV35-201ENST00000390462 DNAH10Q8IVF4 4471 aa3.19□□□□□ -1.9
TRAV35-201ENST00000390462 CRYM-AS1A6NIL9 109 aa3.18□□□□□ -1.9
TRAV35-201ENST00000390462 DNAL4O96015 105 aa3.18□□□□□ -1.9
TRAV35-201ENST00000390462 CYP2G1PQ6ZSU1 146 aa3.18□□□□□ -1.9
TRAV35-201ENST00000390462 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
TRAV35-201ENST00000390462 SFT2D2O95562 160 aa3.17□□□□□ -1.9
TRAV35-201ENST00000390462 PEA15Q15121 130 aa3.17□□□□□ -1.9
TRAV35-201ENST00000390462 WFDC9Q8NEX5 89 aa3.17□□□□□ -1.9
TRAV35-201ENST00000390462 MGST2Q99735 147 aa3.17□□□□□ -1.9
TRAV35-201ENST00000390462 TMEM14CQ9P0S9 112 aa3.17□□□□□ -1.9
TRAV35-201ENST00000390462 HIGD1CA8MV81 97 aa3.16□□□□□ -1.9
TRAV35-201ENST00000390462 FAUP35544 74 aaKnown RBP3.16□□□□□ -1.9
TRAV35-201ENST00000390462 AMELYQ99218 206 aa3.16□□□□□ -1.9
TRAV35-201ENST00000390462 INE1O15225 51 aa3.15□□□□□ -1.91
TRAV35-201ENST00000390462 C10orf128Q5T292 105 aa3.15□□□□□ -1.91
TRAV35-201ENST00000390462 LINC00322Q6ZN03 302 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms