RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RPL37AP8A6NKH3 93 aa9.93□□□□□ -0.82
RTF1-201ENST00000389629 IGLV1-51P01701 117 aa9.92□□□□□ -0.82
RTF1-201ENST00000389629 TACC2O95359 2948 aa9.92□□□□□ -0.82
RTF1-201ENST00000389629 A0A0J9YWU9 116 aa9.92□□□□□ -0.82
RTF1-201ENST00000389629 MRPL55Q7Z7F7 128 aaKnown RBP9.92□□□□□ -0.82
RTF1-201ENST00000389629 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
RTF1-201ENST00000389629 SPATA3Q8NHX4 192 aa9.9□□□□□ -0.82
RTF1-201ENST00000389629 TM2D3Q9BRN9 247 aa9.9□□□□□ -0.82
RTF1-201ENST00000389629 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
RTF1-201ENST00000389629 NDUFB1O75438 58 aa9.89□□□□□ -0.83
RTF1-201ENST00000389629 A0A1B0GUV1 79 aa9.88□□□□□ -0.83
RTF1-201ENST00000389629 CHKB-CPT1BH3BT56 60 aa9.88□□□□□ -0.83
RTF1-201ENST00000389629 ESRGQ1W209 222 aa9.88□□□□□ -0.83
RTF1-201ENST00000389629 CXCL6P80162 114 aa9.88□□□□□ -0.83
RTF1-201ENST00000389629 LELP1Q5T871 98 aa9.88□□□□□ -0.83
RTF1-201ENST00000389629 WDFY3Q8IZQ1 3526 aa9.87□□□□□ -0.83
RTF1-201ENST00000389629 Q6ZQT0 140 aa9.87□□□□□ -0.83
RTF1-201ENST00000389629 LOC400499M0QZD8 3231 aa9.86□□□□□ -0.83
RTF1-201ENST00000389629 C2orf48Q96LS8 159 aa9.86□□□□□ -0.83
RTF1-201ENST00000389629 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
RTF1-201ENST00000389629 A6NED7 52 aa9.85□□□□□ -0.83
RTF1-201ENST00000389629 LINC00336Q6ZUF6 198 aa9.85□□□□□ -0.83
RTF1-201ENST00000389629 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
RTF1-201ENST00000389629 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
RTF1-201ENST00000389629 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
RTF1-201ENST00000389629 LINC00208Q96KT6 92 aa9.83□□□□□ -0.84
RTF1-201ENST00000389629 UBE2AP49459 152 aa9.83□□□□□ -0.84
RTF1-201ENST00000389629 FAM104AQ969W3 186 aa9.83□□□□□ -0.84
RTF1-201ENST00000389629 DMXL2Q8TDJ6 3036 aa9.83□□□□□ -0.84
RTF1-201ENST00000389629 J3QKU1 62 aa9.82□□□□□ -0.84
RTF1-201ENST00000389629 DEFB116Q30KQ4 102 aa9.82□□□□□ -0.84
RTF1-201ENST00000389629 CFAP47Q6ZTR5 3102 aa9.82□□□□□ -0.84
RTF1-201ENST00000389629 LRBAP50851 2863 aa9.82□□□□□ -0.84
RTF1-201ENST00000389629 DHRS4-AS1Q9P1J3 65 aa9.8□□□□□ -0.84
RTF1-201ENST00000389629 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
RTF1-201ENST00000389629 KPRPQ5T749 579 aaPredicted RBP9.8□□□□□ -0.84
RTF1-201ENST00000389629 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
RTF1-201ENST00000389629 SMIM29Q86T20 159 aa9.8□□□□□ -0.84
RTF1-201ENST00000389629 EGFEM1PQ0D2K5 195 aa9.79□□□□□ -0.84
RTF1-201ENST00000389629 SEC61GP60059 68 aa9.79□□□□□ -0.84
RTF1-201ENST00000389629 CYSTM1Q9H1C7 97 aa9.78□□□□□ -0.84
RTF1-201ENST00000389629 BCE1O60756 84 aa9.78□□□□□ -0.84
RTF1-201ENST00000389629 PRR15LQ9BU68 103 aa9.77□□□□□ -0.84
RTF1-201ENST00000389629 H7BZZ5 65 aa9.77□□□□□ -0.85
RTF1-201ENST00000389629 LOC110117498A0A087WWA1 95 aa9.76□□□□□ -0.85
RTF1-201ENST00000389629 DEFB131BA0A096LNP1 70 aa9.75□□□□□ -0.85
RTF1-201ENST00000389629 Q6ZRU5 148 aa9.75□□□□□ -0.85
RTF1-201ENST00000389629 SMR3AQ99954 134 aa9.75□□□□□ -0.85
RTF1-201ENST00000389629 C11orf45Q8TAV5 145 aa9.74□□□□□ -0.85
RTF1-201ENST00000389629 INAFM1C9JVW0 142 aa9.73□□□□□ -0.85
RTF1-201ENST00000389629 KIAA0087Q14695 138 aa9.73□□□□□ -0.85
RTF1-201ENST00000389629 RETNQ9HD89 108 aa9.73□□□□□ -0.85
RTF1-201ENST00000389629 LY6G6DO95868 133 aa9.73□□□□□ -0.85
RTF1-201ENST00000389629 FSHBP01225 129 aa9.73□□□□□ -0.85
RTF1-201ENST00000389629 ATMQ13315 3056 aa9.72□□□□□ -0.85
RTF1-201ENST00000389629 C6orf48Q9UBA6 75 aa9.72□□□□□ -0.85
RTF1-201ENST00000389629 ZZEF1O43149 2961 aa9.72□□□□□ -0.85
RTF1-201ENST00000389629 KLKP1Q107X0 134 aa9.71□□□□□ -0.85
RTF1-201ENST00000389629 IL17DQ8TAD2 202 aa9.71□□□□□ -0.85
RTF1-201ENST00000389629 IGHV4-30-4P0DP06 118 aa9.71□□□□□ -0.86
RTF1-201ENST00000389629 C16orf95Q9H693 158 aa9.7□□□□□ -0.86
RTF1-201ENST00000389629 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.7□□□□□ -0.86
RTF1-201ENST00000389629 M0R2N4 97 aa9.7□□□□□ -0.86
RTF1-201ENST00000389629 A0A087WSZ3 146 aa9.7□□□□□ -0.86
RTF1-201ENST00000389629 X6R8D5 127 aa9.68□□□□□ -0.86
RTF1-201ENST00000389629 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
RTF1-201ENST00000389629 LYPD5Q6UWN5 251 aa9.68□□□□□ -0.86
RTF1-201ENST00000389629 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
RTF1-201ENST00000389629 ELOF1P60002 83 aaKnown RBP9.67□□□□□ -0.86
RTF1-201ENST00000389629 HCG22E2RYF7 251 aa9.67□□□□□ -0.86
RTF1-201ENST00000389629 PCOTHQ58A44 107 aa9.66□□□□□ -0.86
RTF1-201ENST00000389629 B9D2Q9BPU9 175 aa9.66□□□□□ -0.86
RTF1-201ENST00000389629 CSNK1G2-AS1Q8NCQ2 148 aa9.65□□□□□ -0.86
RTF1-201ENST00000389629 CHD6Q8TD26 2715 aa9.65□□□□□ -0.86
RTF1-201ENST00000389629 H0Y9P7 68 aa9.64□□□□□ -0.87
RTF1-201ENST00000389629 A0A096LNT2 108 aa9.64□□□□□ -0.87
RTF1-201ENST00000389629 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
RTF1-201ENST00000389629 Q6ZTC4 211 aa9.64□□□□□ -0.87
RTF1-201ENST00000389629 DCHS1Q96JQ0 3298 aa9.64□□□□□ -0.87
RTF1-201ENST00000389629 FLNAP21333 2647 aaKnown RBP9.63□□□□□ -0.87
RTF1-201ENST00000389629 USP24Q9UPU5 2620 aa9.63□□□□□ -0.87
RTF1-201ENST00000389629 IGLV6-57P01721 117 aa9.63□□□□□ -0.87
RTF1-201ENST00000389629 OXLD1Q5BKU9 147 aa9.63□□□□□ -0.87
RTF1-201ENST00000389629 OBSCN-AS1Q96MR7 158 aa9.63□□□□□ -0.87
RTF1-201ENST00000389629 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
RTF1-201ENST00000389629 Q5XG85 94 aa9.61□□□□□ -0.87
RTF1-201ENST00000389629 WIPF1O43516 503 aa9.6□□□□□ -0.87
RTF1-201ENST00000389629 TNRC18O15417 2968 aaPredicted RBP9.59□□□□□ -0.87
RTF1-201ENST00000389629 REG3GQ6UW15 175 aa9.59□□□□□ -0.87
RTF1-201ENST00000389629 SPINK6Q6UWN8 80 aa9.59□□□□□ -0.87
RTF1-201ENST00000389629 DMXL1Q9Y485 3027 aa9.59□□□□□ -0.87
RTF1-201ENST00000389629 PRLHP81277 87 aa9.58□□□□□ -0.88
RTF1-201ENST00000389629 ASPMQ8IZT6 3477 aa9.58□□□□□ -0.88
RTF1-201ENST00000389629 OXTP01178 125 aa9.58□□□□□ -0.88
RTF1-201ENST00000389629 C19orf73Q9NVV2 129 aa9.58□□□□□ -0.88
RTF1-201ENST00000389629 IGLV9-49A0A0B4J1Y8 123 aa9.58□□□□□ -0.88
RTF1-201ENST00000389629 ST20-AS1Q8NBB2 130 aa9.58□□□□□ -0.88
RTF1-201ENST00000389629 ZFHX4Q86UP3 3567 aa9.58□□□□□ -0.88
RTF1-201ENST00000389629 A8MUN3 132 aa9.57□□□□□ -0.88
RTF1-201ENST00000389629 C22orf24Q9Y442 160 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms