RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 hDV103S1A0JD37 113 aa10.39□□□□□ -0.75
VLDLR-202ENST00000382099 LINC00575Q6W349 94 aa10.39□□□□□ -0.75
VLDLR-202ENST00000382099 USP24Q9UPU5 2620 aa10.38□□□□□ -0.75
VLDLR-202ENST00000382099 C11orf44Q8N8P7 122 aa10.37□□□□□ -0.75
VLDLR-202ENST00000382099 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.37□□□□□ -0.75
VLDLR-202ENST00000382099 IGHV3OR16-9A0A0B4J2B5 98 aa10.37□□□□□ -0.75
VLDLR-202ENST00000382099 IGHV4-61A0A0C4DH41 118 aa10.37□□□□□ -0.75
VLDLR-202ENST00000382099 LOC100131303A0A0U1RQF7 123 aa10.37□□□□□ -0.75
VLDLR-202ENST00000382099 FLNAP21333 2647 aaKnown RBP10.37□□□□□ -0.75
VLDLR-202ENST00000382099 ZNF469Q96JG9 3925 aaPredicted RBP10.36□□□□□ -0.75
VLDLR-202ENST00000382099 PDE6GP18545 87 aa10.35□□□□□ -0.75
VLDLR-202ENST00000382099 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
VLDLR-202ENST00000382099 ERC2-IT1O76042 136 aa10.35□□□□□ -0.75
VLDLR-202ENST00000382099 C9orf116Q5BN46 136 aaPredicted RBP10.35□□□□□ -0.75
VLDLR-202ENST00000382099 HECTD1Q9ULT8 2610 aa10.34□□□□□ -0.75
VLDLR-202ENST00000382099 H3BUA1 57 aa10.34□□□□□ -0.75
VLDLR-202ENST00000382099 Q1T7F1 81 aa10.34□□□□□ -0.75
VLDLR-202ENST00000382099 LMO4P61968 165 aa10.34□□□□□ -0.75
VLDLR-202ENST00000382099 OCR1Q9BZK8 76 aa10.33□□□□□ -0.76
VLDLR-202ENST00000382099 C4orf48Q5BLP8 95 aa10.33□□□□□ -0.76
VLDLR-202ENST00000382099 ITPR3Q14573 2671 aa10.33□□□□□ -0.76
VLDLR-202ENST00000382099 INSP01308 110 aa10.32□□□□□ -0.76
VLDLR-202ENST00000382099 CR1P17927 2039 aa10.32□□□□□ -0.76
VLDLR-202ENST00000382099 CHKB-CPT1BH3BT56 60 aa10.32□□□□□ -0.76
VLDLR-202ENST00000382099 TRGV2A0A075B6R0 118 aa10.31□□□□□ -0.76
VLDLR-202ENST00000382099 ITPR2Q14571 2701 aa10.31□□□□□ -0.76
VLDLR-202ENST00000382099 IGHV4-30-2A0A087WSY4 118 aa10.31□□□□□ -0.76
VLDLR-202ENST00000382099 AKAP9Q99996 3911 aa10.3□□□□□ -0.76
VLDLR-202ENST00000382099 C3orf84H3BNL1 204 aa10.3□□□□□ -0.76
VLDLR-202ENST00000382099 KTN1-AS1Q86SY8 53 aa10.3□□□□□ -0.76
VLDLR-202ENST00000382099 FASNP49327 2511 aaKnown RBP10.3□□□□□ -0.76
VLDLR-202ENST00000382099 UBE2BP63146 152 aa10.29□□□□□ -0.76
VLDLR-202ENST00000382099 SYCNQ0VAF6 134 aa10.29□□□□□ -0.76
VLDLR-202ENST00000382099 IGKV4-1P06312 121 aa10.29□□□□□ -0.76
VLDLR-202ENST00000382099 IGLV1-40P01703 118 aa10.28□□□□□ -0.76
VLDLR-202ENST00000382099 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
VLDLR-202ENST00000382099 NOP10Q9NPE3 64 aaKnown RBP10.28□□□□□ -0.76
VLDLR-202ENST00000382099 GCN1Q92616 2671 aaKnown RBP10.28□□□□□ -0.76
VLDLR-202ENST00000382099 IGHV4-28A0A0C4DH34 117 aa10.28□□□□□ -0.76
VLDLR-202ENST00000382099 SMIM29Q86T20 159 aa10.28□□□□□ -0.76
VLDLR-202ENST00000382099 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
VLDLR-202ENST00000382099 STHQ8IWL8 128 aa10.28□□□□□ -0.76
VLDLR-202ENST00000382099 DEFB136Q30KP8 78 aa10.27□□□□□ -0.77
VLDLR-202ENST00000382099 TRGV4A0A0C4DH28 118 aa10.27□□□□□ -0.77
VLDLR-202ENST00000382099 LINC00959A0A1B0GUT2 108 aa10.27□□□□□ -0.77
VLDLR-202ENST00000382099 C10orf25Q5T742 122 aa10.27□□□□□ -0.77
VLDLR-202ENST00000382099 C9orf66Q5T8R8 295 aa10.26□□□□□ -0.77
VLDLR-202ENST00000382099 CCL19Q99731 98 aa10.26□□□□□ -0.77
VLDLR-202ENST00000382099 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
VLDLR-202ENST00000382099 Q8NDZ9 215 aa10.25□□□□□ -0.77
VLDLR-202ENST00000382099 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
VLDLR-202ENST00000382099 IGHV4-59P01825 116 aa10.24□□□□□ -0.77
VLDLR-202ENST00000382099 DIRC1Q969H9 104 aa10.24□□□□□ -0.77
VLDLR-202ENST00000382099 HELZ2Q9BYK8 2649 aaKnown RBP10.24□□□□□ -0.77
VLDLR-202ENST00000382099 APCP25054 2843 aa10.24□□□□□ -0.77
VLDLR-202ENST00000382099 APOC4P55056 127 aa10.23□□□□□ -0.77
VLDLR-202ENST00000382099 M0R378 163 aa10.22□□□□□ -0.77
VLDLR-202ENST00000382099 SLURP1P55000 103 aa10.22□□□□□ -0.77
VLDLR-202ENST00000382099 LINC00588Q9Y4M8 146 aa10.22□□□□□ -0.77
VLDLR-202ENST00000382099 Q8IZM0 81 aa10.22□□□□□ -0.77
VLDLR-202ENST00000382099 TRBV6-8A0A0A6YYG3 113 aa10.21□□□□□ -0.77
VLDLR-202ENST00000382099 COX7BP24311 80 aa10.21□□□□□ -0.77
VLDLR-202ENST00000382099 HIGD2BQ4VC39 106 aa10.21□□□□□ -0.77
VLDLR-202ENST00000382099 C18orf65Q6ZTR6 163 aa10.21□□□□□ -0.77
VLDLR-202ENST00000382099 A6NDX4 124 aa10.21□□□□□ -0.78
VLDLR-202ENST00000382099 PSCAO43653 123 aa10.21□□□□□ -0.78
VLDLR-202ENST00000382099 UBE2AP49459 152 aa10.21□□□□□ -0.78
VLDLR-202ENST00000382099 PRR15LQ9BU68 103 aa10.2□□□□□ -0.78
VLDLR-202ENST00000382099 MAP6D1Q9H9H5 199 aa10.2□□□□□ -0.78
VLDLR-202ENST00000382099 UBR5O95071 2799 aaPredicted RBP10.2□□□□□ -0.78
VLDLR-202ENST00000382099 HCG22E2RYF7 251 aa10.2□□□□□ -0.78
VLDLR-202ENST00000382099 SETXQ7Z333 2677 aaKnown RBP10.19□□□□□ -0.78
VLDLR-202ENST00000382099 A0A096LPF7 62 aa10.19□□□□□ -0.78
VLDLR-202ENST00000382099 LYRM9A8MSI8 78 aa10.19□□□□□ -0.78
VLDLR-202ENST00000382099 C16orf90A8MZG2 172 aa10.19□□□□□ -0.78
VLDLR-202ENST00000382099 LINC00612Q8N6U2 182 aa10.19□□□□□ -0.78
VLDLR-202ENST00000382099 Q5VV11 94 aa10.18□□□□□ -0.78
VLDLR-202ENST00000382099 A6NED7 52 aa10.18□□□□□ -0.78
VLDLR-202ENST00000382099 DEFB112Q30KQ8 113 aa10.16□□□□□ -0.78
VLDLR-202ENST00000382099 PLA2G2AP14555 144 aa10.15□□□□□ -0.78
VLDLR-202ENST00000382099 KRTAP10-9P60411 292 aa10.15□□□□□ -0.78
VLDLR-202ENST00000382099 DEFB105AQ8NG35 78 aa10.15□□□□□ -0.78
VLDLR-202ENST00000382099 ZNF73O43830 326 aaPredicted RBP10.14□□□□□ -0.79
VLDLR-202ENST00000382099 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
VLDLR-202ENST00000382099 H3BQ85 93 aa10.13□□□□□ -0.79
VLDLR-202ENST00000382099 NDUFS5O43920 106 aa10.12□□□□□ -0.79
VLDLR-202ENST00000382099 COX17Q14061 63 aa10.12□□□□□ -0.79
VLDLR-202ENST00000382099 UNQ6190/PRO20217Q6UXQ8 127 aa10.12□□□□□ -0.79
VLDLR-202ENST00000382099 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
VLDLR-202ENST00000382099 MSMBP08118 114 aa10.11□□□□□ -0.79
VLDLR-202ENST00000382099 IGHV4-31P0DP07 118 aa10.11□□□□□ -0.79
VLDLR-202ENST00000382099 ST20-AS1Q8NBB2 130 aa10.11□□□□□ -0.79
VLDLR-202ENST00000382099 FLNBO75369 2602 aaKnown RBP10.11□□□□□ -0.79
VLDLR-202ENST00000382099 TENM4Q6N022 2769 aa10.1□□□□□ -0.79
VLDLR-202ENST00000382099 ETDCA0A1B0GVM5 59 aa10.1□□□□□ -0.79
VLDLR-202ENST00000382099 VWFP04275 2813 aa10.1□□□□□ -0.79
VLDLR-202ENST00000382099 DEFB130BP0DP73 79 aa10.09□□□□□ -0.79
VLDLR-202ENST00000382099 DEFB130AP0DP74 79 aa10.09□□□□□ -0.79
VLDLR-202ENST00000382099 KIAA0087Q14695 138 aa10.08□□□□□ -0.8
VLDLR-202ENST00000382099 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms