RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
PRPF40B-202ENST00000380281 KRTAP1-3Q8IUG1 177 aa8.64□□□□□ -1.03
PRPF40B-202ENST00000380281 LINC00269Q8N2A0 174 aa8.64□□□□□ -1.03
PRPF40B-202ENST00000380281 TRRAPQ9Y4A5 3859 aa8.64□□□□□ -1.03
PRPF40B-202ENST00000380281 H0YGX0 51 aa8.64□□□□□ -1.03
PRPF40B-202ENST00000380281 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
PRPF40B-202ENST00000380281 LINC00959A0A1B0GUT2 108 aa8.63□□□□□ -1.03
PRPF40B-202ENST00000380281 EPM2AB3EWF7 344 aa8.63□□□□□ -1.03
PRPF40B-202ENST00000380281 ANGP03950 147 aaKnown RBP8.63□□□□□ -1.03
PRPF40B-202ENST00000380281 SEC61GP60059 68 aa8.63□□□□□ -1.03
PRPF40B-202ENST00000380281 NBEAL1Q6ZS30 2694 aa8.63□□□□□ -1.03
PRPF40B-202ENST00000380281 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
PRPF40B-202ENST00000380281 IL17DQ8TAD2 202 aa8.62□□□□□ -1.03
PRPF40B-202ENST00000380281 TRBV6-4A0A1B0GX49 114 aa8.62□□□□□ -1.03
PRPF40B-202ENST00000380281 MAST4O15021 2626 aa8.62□□□□□ -1.03
PRPF40B-202ENST00000380281 SMIM26A0A096LP01 95 aa8.61□□□□□ -1.03
PRPF40B-202ENST00000380281 MPLKIPQ8TAP9 179 aa8.61□□□□□ -1.03
PRPF40B-202ENST00000380281 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
PRPF40B-202ENST00000380281 S100A7L2Q5SY68 101 aa8.61□□□□□ -1.03
PRPF40B-202ENST00000380281 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
PRPF40B-202ENST00000380281 STAB1Q9NY15 2570 aa8.61□□□□□ -1.03
PRPF40B-202ENST00000380281 IGLV1-51P01701 117 aa8.6□□□□□ -1.03
PRPF40B-202ENST00000380281 V9GYY9 64 aa8.6□□□□□ -1.03
PRPF40B-202ENST00000380281 HAMPP81172 84 aa8.6□□□□□ -1.03
PRPF40B-202ENST00000380281 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
PRPF40B-202ENST00000380281 TRBV7-6A0A0J9YX20 115 aa8.59□□□□□ -1.03
PRPF40B-202ENST00000380281 C6orf223Q8N319 242 aa8.59□□□□□ -1.03
PRPF40B-202ENST00000380281 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
PRPF40B-202ENST00000380281 BAHCC1Q9P281 2608 aa8.59□□□□□ -1.03
PRPF40B-202ENST00000380281 TRAV7A0A075B6U4 112 aa8.58□□□□□ -1.04
PRPF40B-202ENST00000380281 A0A087WZ39 114 aa8.58□□□□□ -1.04
PRPF40B-202ENST00000380281 M0R2N4 97 aa8.58□□□□□ -1.04
PRPF40B-202ENST00000380281 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
PRPF40B-202ENST00000380281 FBN1P35555 2871 aaKnown RBP8.57□□□□□ -1.04
PRPF40B-202ENST00000380281 FAM229BQ4G0N7 80 aa8.56□□□□□ -1.04
PRPF40B-202ENST00000380281 IBA57-AS1B1ANH7 110 aa8.56□□□□□ -1.04
PRPF40B-202ENST00000380281 KLKP1Q107X0 134 aa8.56□□□□□ -1.04
PRPF40B-202ENST00000380281 NSD1Q96L73 2696 aaPredicted RBP8.56□□□□□ -1.04
PRPF40B-202ENST00000380281 JMJD7-PLA2G4BH0Y9G9 81 aa8.55□□□□□ -1.04
PRPF40B-202ENST00000380281 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
PRPF40B-202ENST00000380281 C6orf99Q4VX62 202 aa8.55□□□□□ -1.04
PRPF40B-202ENST00000380281 CHCHD10Q8WYQ3 142 aaPredicted RBP8.55□□□□□ -1.04
PRPF40B-202ENST00000380281 TM2D3Q9BRN9 247 aa8.55□□□□□ -1.04
PRPF40B-202ENST00000380281 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
PRPF40B-202ENST00000380281 COL6A5A8TX70 2615 aa8.54□□□□□ -1.04
PRPF40B-202ENST00000380281 KRTAP10-3P60369 221 aa8.54□□□□□ -1.04
PRPF40B-202ENST00000380281 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
PRPF40B-202ENST00000380281 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
PRPF40B-202ENST00000380281 KLK12Q9UKR0 248 aa8.54□□□□□ -1.04
PRPF40B-202ENST00000380281 Q8N814 137 aa8.53□□□□□ -1.04
PRPF40B-202ENST00000380281 LINC01547P58512 204 aaPredicted RBP8.53□□□□□ -1.04
PRPF40B-202ENST00000380281 PRO0255Q9UI72 69 aa8.53□□□□□ -1.04
PRPF40B-202ENST00000380281 Q8NDZ9 215 aa8.53□□□□□ -1.04
PRPF40B-202ENST00000380281 REG3AQ06141 175 aa8.52□□□□□ -1.05
PRPF40B-202ENST00000380281 TMEM256-PLSCR3K7ERE1 68 aa8.52□□□□□ -1.05
PRPF40B-202ENST00000380281 DAD1P61803 113 aa8.52□□□□□ -1.05
PRPF40B-202ENST00000380281 FAM19A3Q7Z5A8 133 aa8.52□□□□□ -1.05
PRPF40B-202ENST00000380281 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
PRPF40B-202ENST00000380281 TENM3Q9P273 2699 aa8.51□□□□□ -1.05
PRPF40B-202ENST00000380281 TRBV10-3A0A0K0K1G6 114 aa8.51□□□□□ -1.05
PRPF40B-202ENST00000380281 LAMTOR3Q9UHA4 124 aa8.51□□□□□ -1.05
PRPF40B-202ENST00000380281 X6R8D5 127 aa8.51□□□□□ -1.05
PRPF40B-202ENST00000380281 KRTAP1-1Q07627 177 aa8.5□□□□□ -1.05
PRPF40B-202ENST00000380281 Q6ZVQ6 151 aa8.49□□□□□ -1.05
PRPF40B-202ENST00000380281 NANOS2P60321 138 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-202ENST00000380281 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
PRPF40B-202ENST00000380281 IGHV4-28A0A0C4DH34 117 aa8.48□□□□□ -1.05
PRPF40B-202ENST00000380281 MIFP14174 115 aa8.48□□□□□ -1.05
PRPF40B-202ENST00000380281 CMC4P56277 68 aaPredicted RBP8.48□□□□□ -1.05
PRPF40B-202ENST00000380281 Q6ZQT0 140 aa8.47□□□□□ -1.05
PRPF40B-202ENST00000380281 SPAG11BQ08648 103 aa8.47□□□□□ -1.05
PRPF40B-202ENST00000380281 ANK3Q12955 4377 aaKnown RBP8.46□□□□□ -1.05
PRPF40B-202ENST00000380281 LY6G6DO95868 133 aa8.46□□□□□ -1.05
PRPF40B-202ENST00000380281 Q8IZM0 81 aa8.46□□□□□ -1.06
PRPF40B-202ENST00000380281 LINC00167Q96N53 147 aa8.46□□□□□ -1.06
PRPF40B-202ENST00000380281 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
PRPF40B-202ENST00000380281 CYSRT1A8MQ03 144 aa8.45□□□□□ -1.06
PRPF40B-202ENST00000380281 INAFM1C9JVW0 142 aa8.45□□□□□ -1.06
PRPF40B-202ENST00000380281 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
PRPF40B-202ENST00000380281 TRBV7-4A0A0J9YYF1 115 aa8.44□□□□□ -1.06
PRPF40B-202ENST00000380281 KIAA0087Q14695 138 aa8.44□□□□□ -1.06
PRPF40B-202ENST00000380281 Q8N9L7 120 aa8.44□□□□□ -1.06
PRPF40B-202ENST00000380281 Q6ZQY7 126 aa8.43□□□□□ -1.06
PRPF40B-202ENST00000380281 TMEM254Q8TBM7 123 aa8.43□□□□□ -1.06
PRPF40B-202ENST00000380281 RETNQ9HD89 108 aa8.43□□□□□ -1.06
PRPF40B-202ENST00000380281 NREPQ16612 68 aa8.43□□□□□ -1.06
PRPF40B-202ENST00000380281 MGAM2Q2M2H8 2515 aa8.42□□□□□ -1.06
PRPF40B-202ENST00000380281 A0A1B0GUV1 79 aa8.41□□□□□ -1.06
PRPF40B-202ENST00000380281 BCE1O60756 84 aa8.41□□□□□ -1.06
PRPF40B-202ENST00000380281 NDUFC1O43677 76 aa8.4□□□□□ -1.06
PRPF40B-202ENST00000380281 BPY2O14599 106 aa8.39□□□□□ -1.07
PRPF40B-202ENST00000380281 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
PRPF40B-202ENST00000380281 ESRGQ1W209 222 aa8.38□□□□□ -1.07
PRPF40B-202ENST00000380281 LINC00575Q6W349 94 aa8.38□□□□□ -1.07
PRPF40B-202ENST00000380281 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
PRPF40B-202ENST00000380281 OXLD1Q5BKU9 147 aa8.37□□□□□ -1.07
PRPF40B-202ENST00000380281 WFDC10BQ8IUB3 73 aa8.37□□□□□ -1.07
PRPF40B-202ENST00000380281 DEFB105AQ8NG35 78 aa8.37□□□□□ -1.07
PRPF40B-202ENST00000380281 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
PRPF40B-202ENST00000380281 CXCL6P80162 114 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms