RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 NOP10Q9NPE3 64 aaKnown RBP8.93□□□□□ -0.98
MSH5-204ENST00000375755 A0A087WZ39 114 aa8.93□□□□□ -0.98
MSH5-204ENST00000375755 PRR3P79522 188 aaKnown RBP8.93□□□□□ -0.98
MSH5-204ENST00000375755 CSNK1G2-AS1Q8NCQ2 148 aa8.92□□□□□ -0.98
MSH5-204ENST00000375755 PLAC8L1A1L4L8 177 aa8.91□□□□□ -0.98
MSH5-204ENST00000375755 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
MSH5-204ENST00000375755 H7BZZ5 65 aa8.91□□□□□ -0.98
MSH5-204ENST00000375755 UBL5Q9BZL1 73 aa8.91□□□□□ -0.98
MSH5-204ENST00000375755 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
MSH5-204ENST00000375755 TMEM256-PLSCR3K7ERE1 68 aa8.9□□□□□ -0.98
MSH5-204ENST00000375755 BRK1Q8WUW1 75 aa8.9□□□□□ -0.98
MSH5-204ENST00000375755 SNURFQ9Y675 71 aa8.9□□□□□ -0.98
MSH5-204ENST00000375755 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.99
MSH5-204ENST00000375755 PRO0628Q9UI54 55 aa8.9□□□□□ -0.99
MSH5-204ENST00000375755 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
MSH5-204ENST00000375755 TRAV7A0A075B6U4 112 aa8.87□□□□□ -0.99
MSH5-204ENST00000375755 LINC00474Q9P2X8 69 aa8.87□□□□□ -0.99
MSH5-204ENST00000375755 TRGV2A0A075B6R0 118 aa8.86□□□□□ -0.99
MSH5-204ENST00000375755 TRBV6-8A0A0A6YYG3 113 aa8.86□□□□□ -0.99
MSH5-204ENST00000375755 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
MSH5-204ENST00000375755 M0R2N4 97 aa8.86□□□□□ -0.99
MSH5-204ENST00000375755 MAST4O15021 2626 aa8.86□□□□□ -0.99
MSH5-204ENST00000375755 TRAV10A0A0B4J240 114 aa8.86□□□□□ -0.99
MSH5-204ENST00000375755 Q6ZQT0 140 aa8.85□□□□□ -0.99
MSH5-204ENST00000375755 DEFB4AO15263 64 aa8.84□□□□□ -0.99
MSH5-204ENST00000375755 CMC4P56277 68 aaPredicted RBP8.84□□□□□ -0.99
MSH5-204ENST00000375755 RMI2Q96E14 147 aa8.84□□□□□ -0.99
MSH5-204ENST00000375755 TRGV4A0A0C4DH28 118 aa8.84□□□□□ -0.99
MSH5-204ENST00000375755 LINC01547P58512 204 aaPredicted RBP8.84□□□□□ -0.99
MSH5-204ENST00000375755 KLKP1Q107X0 134 aa8.84□□□□□ -0.99
MSH5-204ENST00000375755 C6orf99Q4VX62 202 aa8.83□□□□□ -1
MSH5-204ENST00000375755 MPLKIPQ8TAP9 179 aa8.83□□□□□ -1
MSH5-204ENST00000375755 BCE1O60756 84 aa8.83□□□□□ -1
MSH5-204ENST00000375755 C9orf66Q5T8R8 295 aa8.83□□□□□ -1
MSH5-204ENST00000375755 C16orf74Q96GX8 76 aa8.83□□□□□ -1
MSH5-204ENST00000375755 DEFB130BP0DP73 79 aa8.82□□□□□ -1
MSH5-204ENST00000375755 DEFB130AP0DP74 79 aa8.82□□□□□ -1
MSH5-204ENST00000375755 HAMPP81172 84 aa8.82□□□□□ -1
MSH5-204ENST00000375755 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
MSH5-204ENST00000375755 RBM3P98179 157 aaKnown RBP8.82□□□□□ -1
MSH5-204ENST00000375755 KRTAP24-1Q3LI83 254 aa8.82□□□□□ -1
MSH5-204ENST00000375755 Q8IZM0 81 aa8.82□□□□□ -1
MSH5-204ENST00000375755 Q8NDZ9 215 aa8.82□□□□□ -1
MSH5-204ENST00000375755 DNAH3Q8TD57 4116 aa8.82□□□□□ -1
MSH5-204ENST00000375755 SEC61GP60059 68 aa8.82□□□□□ -1
MSH5-204ENST00000375755 F8WEM9 126 aa8.81□□□□□ -1
MSH5-204ENST00000375755 DEFB135Q30KP9 77 aa8.81□□□□□ -1
MSH5-204ENST00000375755 Q6ZVQ6 151 aa8.81□□□□□ -1
MSH5-204ENST00000375755 COL6A5A8TX70 2615 aa8.81□□□□□ -1
MSH5-204ENST00000375755 CLPSL2Q6UWE3 100 aa8.81□□□□□ -1
MSH5-204ENST00000375755 LINC00575Q6W349 94 aa8.81□□□□□ -1
MSH5-204ENST00000375755 X6R8D5 127 aa8.81□□□□□ -1
MSH5-204ENST00000375755 LOC110117498A0A087WWA1 95 aa8.8□□□□□ -1
MSH5-204ENST00000375755 OXLD1Q5BKU9 147 aa8.8□□□□□ -1
MSH5-204ENST00000375755 LAMTOR3Q9UHA4 124 aa8.79□□□□□ -1
MSH5-204ENST00000375755 C9orf116Q5BN46 136 aaPredicted RBP8.79□□□□□ -1
MSH5-204ENST00000375755 ZNF561-AS1K7EIQ3 104 aa8.79□□□□□ -1
MSH5-204ENST00000375755 C6orf223Q8N319 242 aa8.79□□□□□ -1
MSH5-204ENST00000375755 SMIM26A0A096LP01 95 aa8.78□□□□□ -1
MSH5-204ENST00000375755 V9GYY9 64 aa8.78□□□□□ -1
MSH5-204ENST00000375755 F8WDY8 70 aa8.77□□□□□ -1
MSH5-204ENST00000375755 NOTCH1P46531 2555 aa8.77□□□□□ -1.01
MSH5-204ENST00000375755 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
MSH5-204ENST00000375755 C1orf195Q5TG92 126 aa8.77□□□□□ -1.01
MSH5-204ENST00000375755 TM2D3Q9BRN9 247 aa8.76□□□□□ -1.01
MSH5-204ENST00000375755 Q8N3U1 123 aa8.76□□□□□ -1.01
MSH5-204ENST00000375755 TENM3Q9P273 2699 aa8.75□□□□□ -1.01
MSH5-204ENST00000375755 A0A096LPF7 62 aa8.75□□□□□ -1.01
MSH5-204ENST00000375755 SCXQ7RTU7 201 aa8.75□□□□□ -1.01
MSH5-204ENST00000375755 TRBV7-6A0A0J9YX20 115 aa8.74□□□□□ -1.01
MSH5-204ENST00000375755 KRTAP10-11P60412 298 aa8.74□□□□□ -1.01
MSH5-204ENST00000375755 CXCL6P80162 114 aa8.74□□□□□ -1.01
MSH5-204ENST00000375755 IGHV4-30-4P0DP06 118 aa8.74□□□□□ -1.01
MSH5-204ENST00000375755 COX17Q14061 63 aa8.74□□□□□ -1.01
MSH5-204ENST00000375755 LINC00269Q8N2A0 174 aa8.73□□□□□ -1.01
MSH5-204ENST00000375755 CELA1Q9UNI1 258 aa8.73□□□□□ -1.01
MSH5-204ENST00000375755 TRBV7-4A0A0J9YYF1 115 aa8.73□□□□□ -1.01
MSH5-204ENST00000375755 Q6ZQY7 126 aa8.73□□□□□ -1.01
MSH5-204ENST00000375755 IGHV4-28A0A0C4DH34 117 aa8.72□□□□□ -1.01
MSH5-204ENST00000375755 A0A1B0GUV1 79 aa8.72□□□□□ -1.01
MSH5-204ENST00000375755 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.01
MSH5-204ENST00000375755 GYPEP15421 78 aa8.71□□□□□ -1.01
MSH5-204ENST00000375755 MUC7Q8TAX7 377 aa8.71□□□□□ -1.01
MSH5-204ENST00000375755 IGLV10-54A0A075B6I4 117 aa8.71□□□□□ -1.02
MSH5-204ENST00000375755 MIFP14174 115 aa8.7□□□□□ -1.02
MSH5-204ENST00000375755 RETNQ9HD89 108 aa8.7□□□□□ -1.02
MSH5-204ENST00000375755 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
MSH5-204ENST00000375755 NDUFC1O43677 76 aa8.69□□□□□ -1.02
MSH5-204ENST00000375755 LINC00612Q8N6U2 182 aa8.69□□□□□ -1.02
MSH5-204ENST00000375755 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
MSH5-204ENST00000375755 PDE6GP18545 87 aa8.69□□□□□ -1.02
MSH5-204ENST00000375755 NREPQ16612 68 aa8.69□□□□□ -1.02
MSH5-204ENST00000375755 FAM229BQ4G0N7 80 aa8.69□□□□□ -1.02
MSH5-204ENST00000375755 C10orf25Q5T742 122 aa8.69□□□□□ -1.02
MSH5-204ENST00000375755 CHCHD10Q8WYQ3 142 aaPredicted RBP8.69□□□□□ -1.02
MSH5-204ENST00000375755 Q8NAQ8 132 aa8.68□□□□□ -1.02
MSH5-204ENST00000375755 APOC4P55056 127 aa8.68□□□□□ -1.02
MSH5-204ENST00000375755 IGLV6-57P01721 117 aa8.67□□□□□ -1.02
MSH5-204ENST00000375755 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
MSH5-204ENST00000375755 UNQ6190/PRO20217Q6UXQ8 127 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms