RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 PRR34Q9NV39 138 aa12.18□□□□□ -0.46
PHF1-201ENST00000374512 GVQW2A0A096LPI5 108 aaPredicted RBP12.17□□□□□ -0.46
PHF1-201ENST00000374512 TRBV10-3A0A0K0K1G6 114 aa12.17□□□□□ -0.46
PHF1-201ENST00000374512 USP17L23D6RBM5 183 aa12.17□□□□□ -0.46
PHF1-201ENST00000374512 Q8N3U1 123 aa12.17□□□□□ -0.46
PHF1-201ENST00000374512 Q8NAQ8 132 aa12.17□□□□□ -0.46
PHF1-201ENST00000374512 hADV29S1A0JD25 119 aa12.16□□□□□ -0.46
PHF1-201ENST00000374512 IGLV6-57P01721 117 aa12.16□□□□□ -0.46
PHF1-201ENST00000374512 SPART-AS1P0CW21 52 aa12.16□□□□□ -0.46
PHF1-201ENST00000374512 HIVEP1P15822 2718 aa12.16□□□□□ -0.46
PHF1-201ENST00000374512 ZNF561-AS1K7EIQ3 104 aa12.15□□□□□ -0.46
PHF1-201ENST00000374512 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
PHF1-201ENST00000374512 Q8NDZ9 215 aa12.15□□□□□ -0.46
PHF1-201ENST00000374512 UBL5Q9BZL1 73 aa12.15□□□□□ -0.46
PHF1-201ENST00000374512 CELA1Q9UNI1 258 aa12.15□□□□□ -0.46
PHF1-201ENST00000374512 NBEAL2Q6ZNJ1 2754 aa12.15□□□□□ -0.47
PHF1-201ENST00000374512 LOC110117498A0A087WWA1 95 aa12.14□□□□□ -0.47
PHF1-201ENST00000374512 VWFP04275 2813 aa12.14□□□□□ -0.47
PHF1-201ENST00000374512 A0A087WVE0 104 aa12.14□□□□□ -0.47
PHF1-201ENST00000374512 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
PHF1-201ENST00000374512 RBM3P98179 157 aaKnown RBP12.14□□□□□ -0.47
PHF1-201ENST00000374512 WFDC9Q8NEX5 89 aa12.14□□□□□ -0.47
PHF1-201ENST00000374512 C10orf25Q5T742 122 aa12.13□□□□□ -0.47
PHF1-201ENST00000374512 C6orf223Q8N319 242 aa12.12□□□□□ -0.47
PHF1-201ENST00000374512 FLNBO75369 2602 aaKnown RBP12.12□□□□□ -0.47
PHF1-201ENST00000374512 PDE6GP18545 87 aa12.11□□□□□ -0.47
PHF1-201ENST00000374512 Q6ZQT0 140 aa12.11□□□□□ -0.47
PHF1-201ENST00000374512 WIPF1O43516 503 aa12.1□□□□□ -0.47
PHF1-201ENST00000374512 GHRHP01286 108 aa12.1□□□□□ -0.47
PHF1-201ENST00000374512 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
PHF1-201ENST00000374512 HTN3P15516 51 aa12.09□□□□□ -0.47
PHF1-201ENST00000374512 RPS28P62857 69 aaKnown RBP12.09□□□□□ -0.47
PHF1-201ENST00000374512 KLK12Q9UKR0 248 aa12.09□□□□□ -0.47
PHF1-201ENST00000374512 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
PHF1-201ENST00000374512 TMEM258P61165 79 aa12.08□□□□□ -0.48
PHF1-201ENST00000374512 ENHOQ6UWT2 76 aa12.08□□□□□ -0.48
PHF1-201ENST00000374512 TEP1Q99973 2627 aaKnown RBP12.07□□□□□ -0.48
PHF1-201ENST00000374512 LAMTOR3Q9UHA4 124 aa12.07□□□□□ -0.48
PHF1-201ENST00000374512 ATRQ13535 2644 aa12.07□□□□□ -0.48
PHF1-201ENST00000374512 J3KT08 172 aa12.07□□□□□ -0.48
PHF1-201ENST00000374512 TRBV7-6A0A0J9YX20 115 aa12.06□□□□□ -0.48
PHF1-201ENST00000374512 BCE1O60756 84 aa12.06□□□□□ -0.48
PHF1-201ENST00000374512 DSCR8Q96T75 97 aa12.06□□□□□ -0.48
PHF1-201ENST00000374512 TRAV23DV6A0A075B6W5 121 aa12.05□□□□□ -0.48
PHF1-201ENST00000374512 DIRC1Q969H9 104 aa12.05□□□□□ -0.48
PHF1-201ENST00000374512 C6orf48Q9UBA6 75 aa12.05□□□□□ -0.48
PHF1-201ENST00000374512 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
PHF1-201ENST00000374512 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.03□□□□□ -0.48
PHF1-201ENST00000374512 Q6ZQY7 126 aa12.03□□□□□ -0.48
PHF1-201ENST00000374512 H3BNG1 76 aa12.02□□□□□ -0.48
PHF1-201ENST00000374512 FAM19A1Q7Z5A9 133 aa12.02□□□□□ -0.49
PHF1-201ENST00000374512 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
PHF1-201ENST00000374512 COX7BP24311 80 aa11.99□□□□□ -0.49
PHF1-201ENST00000374512 CYSTM1Q9H1C7 97 aa11.99□□□□□ -0.49
PHF1-201ENST00000374512 ELOF1P60002 83 aaKnown RBP11.99□□□□□ -0.49
PHF1-201ENST00000374512 EGFEM1PQ0D2K5 195 aa11.99□□□□□ -0.49
PHF1-201ENST00000374512 NDUFC2-KCTD14E9PQ53 114 aa11.98□□□□□ -0.49
PHF1-201ENST00000374512 CXCL6P80162 114 aa11.98□□□□□ -0.49
PHF1-201ENST00000374512 TRRAPQ9Y4A5 3859 aa11.98□□□□□ -0.49
PHF1-201ENST00000374512 F8P00451 2351 aa11.98□□□□□ -0.49
PHF1-201ENST00000374512 LINC01547P58512 204 aaPredicted RBP11.97□□□□□ -0.49
PHF1-201ENST00000374512 XAGE1AQ9HD64 81 aa11.97□□□□□ -0.49
PHF1-201ENST00000374512 Q6ZVQ6 151 aa11.96□□□□□ -0.49
PHF1-201ENST00000374512 CAMK2N2Q96S95 79 aa11.96□□□□□ -0.49
PHF1-201ENST00000374512 M0R378 163 aa11.96□□□□□ -0.49
PHF1-201ENST00000374512 TRBV7-4A0A0J9YYF1 115 aa11.95□□□□□ -0.5
PHF1-201ENST00000374512 VPREB1P12018 145 aa11.95□□□□□ -0.5
PHF1-201ENST00000374512 F8WDY8 70 aa11.95□□□□□ -0.5
PHF1-201ENST00000374512 DPH3Q96FX2 82 aa11.94□□□□□ -0.5
PHF1-201ENST00000374512 OXLD1Q5BKU9 147 aa11.94□□□□□ -0.5
PHF1-201ENST00000374512 KRTAP26-1Q6PEX3 210 aa11.94□□□□□ -0.5
PHF1-201ENST00000374512 LOC107984640A0A0U1RRK4 108 aa11.93□□□□□ -0.5
PHF1-201ENST00000374512 TRAV7A0A075B6U4 112 aa11.92□□□□□ -0.5
PHF1-201ENST00000374512 HAMPP81172 84 aa11.92□□□□□ -0.5
PHF1-201ENST00000374512 KRTAP24-1Q3LI83 254 aa11.92□□□□□ -0.5
PHF1-201ENST00000374512 M0R2N4 97 aa11.91□□□□□ -0.5
PHF1-201ENST00000374512 KPRPQ5T749 579 aaPredicted RBP11.91□□□□□ -0.5
PHF1-201ENST00000374512 WFDC10BQ8IUB3 73 aa11.91□□□□□ -0.5
PHF1-201ENST00000374512 KRTAP10-11P60412 298 aa11.9□□□□□ -0.5
PHF1-201ENST00000374512 RETNQ9HD89 108 aa11.9□□□□□ -0.5
PHF1-201ENST00000374512 HIGD2BQ4VC39 106 aa11.9□□□□□ -0.51
PHF1-201ENST00000374512 FAM19A5Q7Z5A7 132 aaPredicted RBP11.89□□□□□ -0.51
PHF1-201ENST00000374512 Q6ZRU5 148 aa11.88□□□□□ -0.51
PHF1-201ENST00000374512 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
PHF1-201ENST00000374512 C15orf56Q8N910 161 aa11.88□□□□□ -0.51
PHF1-201ENST00000374512 Q6ZTC4 211 aa11.87□□□□□ -0.51
PHF1-201ENST00000374512 C20orf197Q8N268 126 aa11.86□□□□□ -0.51
PHF1-201ENST00000374512 C1orf43Q9BWL3 253 aa11.84□□□□□ -0.51
PHF1-201ENST00000374512 LINC01556Q5JQF7 62 aa11.83□□□□□ -0.52
PHF1-201ENST00000374512 KLKP1Q107X0 134 aa11.82□□□□□ -0.52
PHF1-201ENST00000374512 ESRGQ1W209 222 aa11.81□□□□□ -0.52
PHF1-201ENST00000374512 Q6ZRP5 223 aa11.8□□□□□ -0.52
PHF1-201ENST00000374512 SYCNQ0VAF6 134 aa11.79□□□□□ -0.52
PHF1-201ENST00000374512 KCNQ1DNQ9H478 68 aa11.79□□□□□ -0.52
PHF1-201ENST00000374512 TRAV10A0A0B4J240 114 aa11.79□□□□□ -0.52
PHF1-201ENST00000374512 CMYA5Q8N3K9 4069 aa11.77□□□□□ -0.53
PHF1-201ENST00000374512 FAM236DA0A1B0GTK5 79 aa11.76□□□□□ -0.53
PHF1-201ENST00000374512 H7BZZ5 65 aa11.76□□□□□ -0.53
PHF1-201ENST00000374512 FAM236CP0DP71 79 aa11.76□□□□□ -0.53
PHF1-201ENST00000374512 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms