RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
PTPRU-202ENST00000373779 LINC00208Q96KT6 92 aa11.89□□□□□ -0.51
PTPRU-202ENST00000373779 KIAA0087Q14695 138 aa11.88□□□□□ -0.51
PTPRU-202ENST00000373779 UNC80Q8N2C7 3258 aa11.88□□□□□ -0.51
PTPRU-202ENST00000373779 ZNF706Q9Y5V0 76 aaPredicted RBP11.88□□□□□ -0.51
PTPRU-202ENST00000373779 IGLV9-49A0A0B4J1Y8 123 aa11.87□□□□□ -0.51
PTPRU-202ENST00000373779 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
PTPRU-202ENST00000373779 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
PTPRU-202ENST00000373779 CSNK1G2-AS1Q8NCQ2 148 aa11.87□□□□□ -0.51
PTPRU-202ENST00000373779 LINC00474Q9P2X8 69 aa11.87□□□□□ -0.51
PTPRU-202ENST00000373779 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
PTPRU-202ENST00000373779 A0A096LNT2 108 aa11.86□□□□□ -0.51
PTPRU-202ENST00000373779 PKD1L2Q7Z442 2459 aa11.86□□□□□ -0.51
PTPRU-202ENST00000373779 A0A087WSZ3 146 aa11.86□□□□□ -0.51
PTPRU-202ENST00000373779 LINC01556Q5JQF7 62 aa11.85□□□□□ -0.51
PTPRU-202ENST00000373779 Q9BRP9 147 aa11.85□□□□□ -0.51
PTPRU-202ENST00000373779 C1orf195Q5TG92 126 aa11.85□□□□□ -0.51
PTPRU-202ENST00000373779 C22orf24Q9Y442 160 aa11.84□□□□□ -0.51
PTPRU-202ENST00000373779 ESRGQ1W209 222 aa11.84□□□□□ -0.51
PTPRU-202ENST00000373779 HCG22E2RYF7 251 aa11.84□□□□□ -0.51
PTPRU-202ENST00000373779 MTORP42345 2549 aa11.83□□□□□ -0.52
PTPRU-202ENST00000373779 JMJD1CQ15652 2540 aa11.83□□□□□ -0.52
PTPRU-202ENST00000373779 CASC2Q6XLA1 102 aa11.83□□□□□ -0.52
PTPRU-202ENST00000373779 SMIM29Q86T20 159 aa11.82□□□□□ -0.52
PTPRU-202ENST00000373779 DEFB116Q30KQ4 102 aa11.82□□□□□ -0.52
PTPRU-202ENST00000373779 IGLV6-57P01721 117 aa11.82□□□□□ -0.52
PTPRU-202ENST00000373779 Q8NAQ8 132 aa11.82□□□□□ -0.52
PTPRU-202ENST00000373779 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
PTPRU-202ENST00000373779 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
PTPRU-202ENST00000373779 H3BNG1 76 aa11.81□□□□□ -0.52
PTPRU-202ENST00000373779 GIG44P09565 113 aaPredicted RBP11.81□□□□□ -0.52
PTPRU-202ENST00000373779 A6NED7 52 aa11.8□□□□□ -0.52
PTPRU-202ENST00000373779 M0R2N4 97 aa11.8□□□□□ -0.52
PTPRU-202ENST00000373779 CFAP54Q96N23 3096 aa11.79□□□□□ -0.52
PTPRU-202ENST00000373779 C4orf26Q17RF5 130 aa11.79□□□□□ -0.52
PTPRU-202ENST00000373779 PRLHP81277 87 aa11.78□□□□□ -0.52
PTPRU-202ENST00000373779 LINC00167Q96N53 147 aa11.78□□□□□ -0.52
PTPRU-202ENST00000373779 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
PTPRU-202ENST00000373779 CDH23Q9H251 3354 aa11.77□□□□□ -0.53
PTPRU-202ENST00000373779 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.53
PTPRU-202ENST00000373779 A0A1B0GW54 56 aa11.76□□□□□ -0.53
PTPRU-202ENST00000373779 H0Y9P7 68 aa11.76□□□□□ -0.53
PTPRU-202ENST00000373779 ZFYVE26Q68DK2 2539 aa11.75□□□□□ -0.53
PTPRU-202ENST00000373779 C19orf73Q9NVV2 129 aa11.74□□□□□ -0.53
PTPRU-202ENST00000373779 VPREB1P12018 145 aa11.74□□□□□ -0.53
PTPRU-202ENST00000373779 PSPHP1O15172 72 aa11.73□□□□□ -0.53
PTPRU-202ENST00000373779 Q6ZRX8 168 aa11.73□□□□□ -0.53
PTPRU-202ENST00000373779 PRR15LQ9BU68 103 aa11.73□□□□□ -0.53
PTPRU-202ENST00000373779 FAM104AQ969W3 186 aa11.73□□□□□ -0.53
PTPRU-202ENST00000373779 SEC61GP60059 68 aa11.72□□□□□ -0.53
PTPRU-202ENST00000373779 C9orf129Q5T035 196 aaKnown RBP11.72□□□□□ -0.53
PTPRU-202ENST00000373779 PRO0628Q9UI54 55 aa11.72□□□□□ -0.53
PTPRU-202ENST00000373779 Q8NBF4 154 aa11.71□□□□□ -0.53
PTPRU-202ENST00000373779 hDV103S1A0JD37 113 aa11.7□□□□□ -0.54
PTPRU-202ENST00000373779 LINC00612Q8N6U2 182 aa11.7□□□□□ -0.54
PTPRU-202ENST00000373779 Q6ZRP5 223 aa11.69□□□□□ -0.54
PTPRU-202ENST00000373779 ACANP16112 2415 aa11.69□□□□□ -0.54
PTPRU-202ENST00000373779 IGHV6-1A0A0B4J1U7 121 aa11.69□□□□□ -0.54
PTPRU-202ENST00000373779 PCOTHQ58A44 107 aa11.67□□□□□ -0.54
PTPRU-202ENST00000373779 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
PTPRU-202ENST00000373779 ST20-AS1Q8NBB2 130 aa11.66□□□□□ -0.54
PTPRU-202ENST00000373779 PRR34Q9NV39 138 aa11.65□□□□□ -0.54
PTPRU-202ENST00000373779 NUPR2A6NF83 97 aa11.65□□□□□ -0.54
PTPRU-202ENST00000373779 LINC00476Q8WZB0 136 aa11.65□□□□□ -0.55
PTPRU-202ENST00000373779 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
PTPRU-202ENST00000373779 C1orf64Q8NEQ6 169 aa11.63□□□□□ -0.55
PTPRU-202ENST00000373779 PMAIP1Q13794 54 aa11.62□□□□□ -0.55
PTPRU-202ENST00000373779 DNAH14Q0VDD8 3507 aa11.61□□□□□ -0.55
PTPRU-202ENST00000373779 ERC2-IT1O76042 136 aa11.6□□□□□ -0.55
PTPRU-202ENST00000373779 OBSCN-AS1Q96MR7 158 aa11.6□□□□□ -0.55
PTPRU-202ENST00000373779 SERTAD4-AS1Q5TG53 156 aa11.59□□□□□ -0.55
PTPRU-202ENST00000373779 CIRBP-AS1Q8TBR5 109 aa11.59□□□□□ -0.55
PTPRU-202ENST00000373779 KCNQ1DNQ9H478 68 aa11.59□□□□□ -0.55
PTPRU-202ENST00000373779 TRIOO75962 3097 aa11.59□□□□□ -0.55
PTPRU-202ENST00000373779 TRBV7-4A0A0J9YYF1 115 aa11.58□□□□□ -0.56
PTPRU-202ENST00000373779 KLKP1Q107X0 134 aa11.58□□□□□ -0.56
PTPRU-202ENST00000373779 LINC00588Q9Y4M8 146 aa11.57□□□□□ -0.56
PTPRU-202ENST00000373779 FAM168BA1KXE4 195 aa11.56□□□□□ -0.56
PTPRU-202ENST00000373779 DNAH10OSP0CZ25 163 aa11.56□□□□□ -0.56
PTPRU-202ENST00000373779 C15orf56Q8N910 161 aa11.55□□□□□ -0.56
PTPRU-202ENST00000373779 KRTAP10-3P60369 221 aa11.55□□□□□ -0.56
PTPRU-202ENST00000373779 XIRP2A4UGR9 3374 aa11.55□□□□□ -0.56
PTPRU-202ENST00000373779 LY6G6CO95867 125 aa11.54□□□□□ -0.56
PTPRU-202ENST00000373779 IGLV1-50A0A075B6I6 118 aa11.53□□□□□ -0.56
PTPRU-202ENST00000373779 MGAQ8IWI9 3026 aa11.53□□□□□ -0.56
PTPRU-202ENST00000373779 IGLV5-52A0A0A0MRZ9 124 aa11.53□□□□□ -0.56
PTPRU-202ENST00000373779 LIMD2Q9BT23 127 aa11.53□□□□□ -0.56
PTPRU-202ENST00000373779 C16orf90A8MZG2 172 aa11.52□□□□□ -0.56
PTPRU-202ENST00000373779 H7BZZ5 65 aa11.52□□□□□ -0.57
PTPRU-202ENST00000373779 KRTAP1-3Q8IUG1 177 aa11.52□□□□□ -0.57
PTPRU-202ENST00000373779 PHF5AQ7RTV0 110 aaKnown RBP11.52□□□□□ -0.57
PTPRU-202ENST00000373779 K7EQZ3 153 aa11.51□□□□□ -0.57
PTPRU-202ENST00000373779 H3BPC8 53 aa11.5□□□□□ -0.57
PTPRU-202ENST00000373779 EPM2AB3EWF7 344 aa11.5□□□□□ -0.57
PTPRU-202ENST00000373779 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
PTPRU-202ENST00000373779 TP53AIP1Q9HCN2 124 aa11.49□□□□□ -0.57
PTPRU-202ENST00000373779 Q8N377 158 aa11.49□□□□□ -0.57
PTPRU-202ENST00000373779 VPS13AQ96RL7 3174 aa11.48□□□□□ -0.57
PTPRU-202ENST00000373779 SZT2Q5T011 3432 aa11.48□□□□□ -0.57
PTPRU-202ENST00000373779 LAMA1P25391 3075 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms