RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 LINC00526Q96FQ7 95 aa12.99□□□□□ -0.33
TMEM53-202ENST00000372237 TRRAPQ9Y4A5 3859 aa12.98□□□□□ -0.33
TMEM53-202ENST00000372237 HIST1H4AP62805 103 aaKnown RBP12.98□□□□□ -0.33
TMEM53-202ENST00000372237 KLK12Q9UKR0 248 aa12.97□□□□□ -0.33
TMEM53-202ENST00000372237 CYSRT1A8MQ03 144 aa12.97□□□□□ -0.33
TMEM53-202ENST00000372237 ATOX1O00244 68 aa12.96□□□□□ -0.34
TMEM53-202ENST00000372237 MUC7Q8TAX7 377 aa12.95□□□□□ -0.34
TMEM53-202ENST00000372237 PRR34Q9NV39 138 aa12.95□□□□□ -0.34
TMEM53-202ENST00000372237 A0A0J9YWU9 116 aa12.94□□□□□ -0.34
TMEM53-202ENST00000372237 IGHV4-30-4P0DP06 118 aa12.94□□□□□ -0.34
TMEM53-202ENST00000372237 COX7CP15954 63 aa12.94□□□□□ -0.34
TMEM53-202ENST00000372237 LINC00575Q6W349 94 aa12.94□□□□□ -0.34
TMEM53-202ENST00000372237 SMIM20Q8N5G0 67 aa12.93□□□□□ -0.34
TMEM53-202ENST00000372237 A0A087WVE0 104 aa12.93□□□□□ -0.34
TMEM53-202ENST00000372237 RPL18AQ02543 176 aaKnown RBP12.93□□□□□ -0.34
TMEM53-202ENST00000372237 ENHOQ6UWT2 76 aa12.92□□□□□ -0.34
TMEM53-202ENST00000372237 hADV29S1A0JD25 119 aa12.91□□□□□ -0.34
TMEM53-202ENST00000372237 C2orf48Q96LS8 159 aa12.91□□□□□ -0.34
TMEM53-202ENST00000372237 IGLV6-57P01721 117 aa12.89□□□□□ -0.35
TMEM53-202ENST00000372237 WFDC9Q8NEX5 89 aa12.89□□□□□ -0.35
TMEM53-202ENST00000372237 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
TMEM53-202ENST00000372237 GVQW2A0A096LPI5 108 aaPredicted RBP12.87□□□□□ -0.35
TMEM53-202ENST00000372237 C6orf48Q9UBA6 75 aa12.86□□□□□ -0.35
TMEM53-202ENST00000372237 RBM3P98179 157 aaKnown RBP12.85□□□□□ -0.35
TMEM53-202ENST00000372237 LAMTOR3Q9UHA4 124 aa12.85□□□□□ -0.35
TMEM53-202ENST00000372237 ZNF561-AS1K7EIQ3 104 aa12.85□□□□□ -0.35
TMEM53-202ENST00000372237 XAGE1AQ9HD64 81 aa12.85□□□□□ -0.35
TMEM53-202ENST00000372237 USP17L23D6RBM5 183 aa12.84□□□□□ -0.35
TMEM53-202ENST00000372237 ATP5EP2Q5VTU8 51 aa12.84□□□□□ -0.35
TMEM53-202ENST00000372237 CRYGAP11844 174 aa12.84□□□□□ -0.35
TMEM53-202ENST00000372237 UBL5Q9BZL1 73 aa12.84□□□□□ -0.35
TMEM53-202ENST00000372237 TRBV10-3A0A0K0K1G6 114 aa12.83□□□□□ -0.36
TMEM53-202ENST00000372237 Q6ZQY7 126 aa12.82□□□□□ -0.36
TMEM53-202ENST00000372237 TRAV23DV6A0A075B6W5 121 aa12.82□□□□□ -0.36
TMEM53-202ENST00000372237 Q6ZQT0 140 aa12.82□□□□□ -0.36
TMEM53-202ENST00000372237 SERP2Q8N6R1 65 aa12.82□□□□□ -0.36
TMEM53-202ENST00000372237 WIPF1O43516 503 aa12.81□□□□□ -0.36
TMEM53-202ENST00000372237 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
TMEM53-202ENST00000372237 DIRC1Q969H9 104 aa12.8□□□□□ -0.36
TMEM53-202ENST00000372237 KRTAP24-1Q3LI83 254 aa12.8□□□□□ -0.36
TMEM53-202ENST00000372237 FBN1P35555 2871 aaKnown RBP12.8□□□□□ -0.36
TMEM53-202ENST00000372237 HIGD2BQ4VC39 106 aa12.79□□□□□ -0.36
TMEM53-202ENST00000372237 SVIPQ8NHG7 77 aa12.79□□□□□ -0.36
TMEM53-202ENST00000372237 LOC110117498A0A087WWA1 95 aa12.78□□□□□ -0.36
TMEM53-202ENST00000372237 CAMK2N2Q96S95 79 aa12.78□□□□□ -0.36
TMEM53-202ENST00000372237 KPRPQ5T749 579 aaPredicted RBP12.78□□□□□ -0.36
TMEM53-202ENST00000372237 DSCR8Q96T75 97 aa12.77□□□□□ -0.36
TMEM53-202ENST00000372237 ZNF73O43830 326 aaPredicted RBP12.77□□□□□ -0.37
TMEM53-202ENST00000372237 FAM19A1Q7Z5A9 133 aa12.77□□□□□ -0.37
TMEM53-202ENST00000372237 BAHCC1Q9P281 2608 aa12.76□□□□□ -0.37
TMEM53-202ENST00000372237 STAB1Q9NY15 2570 aa12.76□□□□□ -0.37
TMEM53-202ENST00000372237 H3BQ85 93 aa12.76□□□□□ -0.37
TMEM53-202ENST00000372237 RETNQ9HD89 108 aa12.75□□□□□ -0.37
TMEM53-202ENST00000372237 H3BNG1 76 aa12.74□□□□□ -0.37
TMEM53-202ENST00000372237 COX7BP24311 80 aa12.74□□□□□ -0.37
TMEM53-202ENST00000372237 M0R2N4 97 aa12.73□□□□□ -0.37
TMEM53-202ENST00000372237 CYSTM1Q9H1C7 97 aa12.73□□□□□ -0.37
TMEM53-202ENST00000372237 Q6ZTC4 211 aa12.73□□□□□ -0.37
TMEM53-202ENST00000372237 OXLD1Q5BKU9 147 aa12.72□□□□□ -0.37
TMEM53-202ENST00000372237 UPK3BQ9BT76 320 aa12.72□□□□□ -0.37
TMEM53-202ENST00000372237 VPREB1P12018 145 aa12.72□□□□□ -0.37
TMEM53-202ENST00000372237 ELOF1P60002 83 aaKnown RBP12.72□□□□□ -0.37
TMEM53-202ENST00000372237 EGFEM1PQ0D2K5 195 aa12.72□□□□□ -0.37
TMEM53-202ENST00000372237 KRTAP26-1Q6PEX3 210 aa12.72□□□□□ -0.37
TMEM53-202ENST00000372237 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.72□□□□□ -0.37
TMEM53-202ENST00000372237 Q6ZRU5 148 aa12.72□□□□□ -0.37
TMEM53-202ENST00000372237 GHRHP01286 108 aa12.71□□□□□ -0.37
TMEM53-202ENST00000372237 PDE6GP18545 87 aa12.71□□□□□ -0.37
TMEM53-202ENST00000372237 C15orf56Q8N910 161 aa12.7□□□□□ -0.38
TMEM53-202ENST00000372237 MAST4O15021 2626 aa12.69□□□□□ -0.38
TMEM53-202ENST00000372237 PKD1L1Q8TDX9 2849 aa12.68□□□□□ -0.38
TMEM53-202ENST00000372237 TRBV7-6A0A0J9YX20 115 aa12.68□□□□□ -0.38
TMEM53-202ENST00000372237 NDUFC2-KCTD14E9PQ53 114 aa12.68□□□□□ -0.38
TMEM53-202ENST00000372237 M0R378 163 aa12.68□□□□□ -0.38
TMEM53-202ENST00000372237 HAMPP81172 84 aa12.68□□□□□ -0.38
TMEM53-202ENST00000372237 Q6ZVQ6 151 aa12.68□□□□□ -0.38
TMEM53-202ENST00000372237 LINC01547P58512 204 aaPredicted RBP12.67□□□□□ -0.38
TMEM53-202ENST00000372237 ESRGQ1W209 222 aa12.67□□□□□ -0.38
TMEM53-202ENST00000372237 KRTAP10-11P60412 298 aa12.67□□□□□ -0.38
TMEM53-202ENST00000372237 C1orf43Q9BWL3 253 aa12.67□□□□□ -0.38
TMEM53-202ENST00000372237 TRBV7-4A0A0J9YYF1 115 aa12.64□□□□□ -0.39
TMEM53-202ENST00000372237 TMEM258P61165 79 aa12.64□□□□□ -0.39
TMEM53-202ENST00000372237 IGKV2D-24A0A075B6R9 120 aa12.63□□□□□ -0.39
TMEM53-202ENST00000372237 COL6A5A8TX70 2615 aa12.63□□□□□ -0.39
TMEM53-202ENST00000372237 J3KT08 172 aa12.63□□□□□ -0.39
TMEM53-202ENST00000372237 LOC107984640A0A0U1RRK4 108 aa12.62□□□□□ -0.39
TMEM53-202ENST00000372237 Q6ZRP5 223 aa12.62□□□□□ -0.39
TMEM53-202ENST00000372237 ANK2Q01484 3957 aa12.62□□□□□ -0.39
TMEM53-202ENST00000372237 CMYA5Q8N3K9 4069 aa12.61□□□□□ -0.39
TMEM53-202ENST00000372237 LINC00528Q8N1L1 170 aa12.61□□□□□ -0.39
TMEM53-202ENST00000372237 LINC01556Q5JQF7 62 aa12.61□□□□□ -0.39
TMEM53-202ENST00000372237 CXCL6P80162 114 aa12.6□□□□□ -0.39
TMEM53-202ENST00000372237 DEFB131BA0A096LNP1 70 aa12.59□□□□□ -0.39
TMEM53-202ENST00000372237 SYCNQ0VAF6 134 aa12.58□□□□□ -0.4
TMEM53-202ENST00000372237 F8WDY8 70 aa12.56□□□□□ -0.4
TMEM53-202ENST00000372237 RPS28P62857 69 aaKnown RBP12.56□□□□□ -0.4
TMEM53-202ENST00000372237 C11orf45Q8TAV5 145 aa12.56□□□□□ -0.4
TMEM53-202ENST00000372237 C20orf197Q8N268 126 aa12.55□□□□□ -0.4
TMEM53-202ENST00000372237 BCE1O60756 84 aa12.55□□□□□ -0.4
TMEM53-202ENST00000372237 NKAPP1Q8N9T2 125 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms