RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 SPINK8P0C7L1 97 aa6.95□□□□□ -1.3
EXOSC1-202ENST00000370885 SRSF9Q13242 221 aaKnown RBP eCLIP6.95□□□□□ -1.3
EXOSC1-202ENST00000370885 SPACA4Q8TDM5 124 aa6.95□□□□□ -1.3
EXOSC1-202ENST00000370885 RAB37Q96AX2 223 aa6.95□□□□□ -1.3
EXOSC1-202ENST00000370885 NHP2Q9NX24 153 aaKnown RBP6.95□□□□□ -1.3
EXOSC1-202ENST00000370885 GVQW2A0A096LPI5 108 aaPredicted RBP6.94□□□□□ -1.3
EXOSC1-202ENST00000370885 IGLV5-39A0A0G2JS06 123 aa6.94□□□□□ -1.3
EXOSC1-202ENST00000370885 H3BUT2 72 aa6.94□□□□□ -1.3
EXOSC1-202ENST00000370885 K7ERJ3 54 aa6.94□□□□□ -1.3
EXOSC1-202ENST00000370885 SCGB1A1P11684 91 aa6.94□□□□□ -1.3
EXOSC1-202ENST00000370885 XCL1P47992 114 aa6.94□□□□□ -1.3
EXOSC1-202ENST00000370885 VPS25Q9BRG1 176 aa6.94□□□□□ -1.3
EXOSC1-202ENST00000370885 TRAV13-1A0A0B4J241 112 aa6.93□□□□□ -1.3
EXOSC1-202ENST00000370885 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
EXOSC1-202ENST00000370885 A0A1W2PPM0 123 aa6.92□□□□□ -1.3
EXOSC1-202ENST00000370885 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
EXOSC1-202ENST00000370885 LITAFQ99732 161 aa6.92□□□□□ -1.3
EXOSC1-202ENST00000370885 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
EXOSC1-202ENST00000370885 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
EXOSC1-202ENST00000370885 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
EXOSC1-202ENST00000370885 A0A096LNI7 61 aa6.91□□□□□ -1.3
EXOSC1-202ENST00000370885 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
EXOSC1-202ENST00000370885 A6NJY4 79 aa6.91□□□□□ -1.3
EXOSC1-202ENST00000370885 SMIM1B2RUZ4 78 aa6.91□□□□□ -1.3
EXOSC1-202ENST00000370885 TMEM238C9JI98 176 aa6.91□□□□□ -1.3
EXOSC1-202ENST00000370885 TIMM17BO60830 172 aa6.91□□□□□ -1.3
EXOSC1-202ENST00000370885 OXTP01178 125 aa6.91□□□□□ -1.3
EXOSC1-202ENST00000370885 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
EXOSC1-202ENST00000370885 IGKV2-24A0A0C4DH68 120 aa6.9□□□□□ -1.3
EXOSC1-202ENST00000370885 GAGE10A6NGK3 116 aa6.9□□□□□ -1.3
EXOSC1-202ENST00000370885 K7EP34 96 aa6.9□□□□□ -1.3
EXOSC1-202ENST00000370885 NDUFA1O15239 70 aa6.9□□□□□ -1.3
EXOSC1-202ENST00000370885 ADAMTSL4-AS1Q5T5F5 129 aa6.9□□□□□ -1.3
EXOSC1-202ENST00000370885 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.3
EXOSC1-202ENST00000370885 FABP2P12104 132 aa6.89□□□□□ -1.31
EXOSC1-202ENST00000370885 CD164L2Q6UWJ8 174 aa6.89□□□□□ -1.31
EXOSC1-202ENST00000370885 GTF2H5Q6ZYL4 71 aa6.89□□□□□ -1.31
EXOSC1-202ENST00000370885 MTURNQ8N3F0 131 aa6.89□□□□□ -1.31
EXOSC1-202ENST00000370885 DPH3Q96FX2 82 aa6.89□□□□□ -1.31
EXOSC1-202ENST00000370885 SPANXDQ9BXN6 97 aa6.89□□□□□ -1.31
EXOSC1-202ENST00000370885 SPANXCQ9NY87 97 aa6.89□□□□□ -1.31
EXOSC1-202ENST00000370885 IGHV3OR16-9A0A0B4J2B5 98 aa6.88□□□□□ -1.31
EXOSC1-202ENST00000370885 CFC1BP0CG36 223 aa6.88□□□□□ -1.31
EXOSC1-202ENST00000370885 CFC1P0CG37 223 aa6.88□□□□□ -1.31
EXOSC1-202ENST00000370885 SS18Q15532 418 aa6.88□□□□□ -1.31
EXOSC1-202ENST00000370885 OCIAD2Q56VL3 154 aa6.88□□□□□ -1.31
EXOSC1-202ENST00000370885 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
EXOSC1-202ENST00000370885 A4D1N5 150 aa6.87□□□□□ -1.31
EXOSC1-202ENST00000370885 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
EXOSC1-202ENST00000370885 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
EXOSC1-202ENST00000370885 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
EXOSC1-202ENST00000370885 A0A087WZ39 114 aa6.86□□□□□ -1.31
EXOSC1-202ENST00000370885 APOMO95445 188 aa6.86□□□□□ -1.31
EXOSC1-202ENST00000370885 RNF151Q2KHN1 245 aa6.86□□□□□ -1.31
EXOSC1-202ENST00000370885 C4orf48Q5BLP8 95 aa6.86□□□□□ -1.31
EXOSC1-202ENST00000370885 Q6ZRU5 148 aa6.86□□□□□ -1.31
EXOSC1-202ENST00000370885 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
EXOSC1-202ENST00000370885 CARD19Q96LW7 228 aa6.86□□□□□ -1.31
EXOSC1-202ENST00000370885 A0A0B4J2C4 111 aa6.85□□□□□ -1.31
EXOSC1-202ENST00000370885 A0A1B0GV72 72 aa6.85□□□□□ -1.31
EXOSC1-202ENST00000370885 TSPAN13O95857 204 aa6.85□□□□□ -1.31
EXOSC1-202ENST00000370885 IFITM1P13164 125 aa6.85□□□□□ -1.31
EXOSC1-202ENST00000370885 HERV-K104P63124 156 aa6.85□□□□□ -1.31
EXOSC1-202ENST00000370885 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
EXOSC1-202ENST00000370885 LINC01561Q8N1V8 128 aa6.85□□□□□ -1.31
EXOSC1-202ENST00000370885 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
EXOSC1-202ENST00000370885 A0A1W2PNN7 141 aa6.84□□□□□ -1.31
EXOSC1-202ENST00000370885 COX7A2LO14548 114 aa6.84□□□□□ -1.31
EXOSC1-202ENST00000370885 PRSS2P07478 247 aa6.84□□□□□ -1.31
EXOSC1-202ENST00000370885 PRR3P79522 188 aaKnown RBP6.84□□□□□ -1.31
EXOSC1-202ENST00000370885 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
EXOSC1-202ENST00000370885 LRP2P98164 4655 aa6.84□□□□□ -1.31
EXOSC1-202ENST00000370885 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
EXOSC1-202ENST00000370885 PPDPFQ9H3Y8 114 aa6.83□□□□□ -1.32
EXOSC1-202ENST00000370885 MALP21145 153 aa6.81□□□□□ -1.32
EXOSC1-202ENST00000370885 GAGE2BQ13066 116 aa6.81□□□□□ -1.32
EXOSC1-202ENST00000370885 C10orf25Q5T742 122 aa6.81□□□□□ -1.32
EXOSC1-202ENST00000370885 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
EXOSC1-202ENST00000370885 LINC00308Q8TCZ7 52 aa6.81□□□□□ -1.32
EXOSC1-202ENST00000370885 C7orf33Q8WU49 177 aa6.81□□□□□ -1.32
EXOSC1-202ENST00000370885 ERG28Q9UKR5 140 aa6.81□□□□□ -1.32
EXOSC1-202ENST00000370885 SPAG11BQ08648 103 aa6.8□□□□□ -1.32
EXOSC1-202ENST00000370885 SOSTDC1Q6X4U4 206 aa6.8□□□□□ -1.32
EXOSC1-202ENST00000370885 C2orf48Q96LS8 159 aa6.8□□□□□ -1.32
EXOSC1-202ENST00000370885 CAMK2N2Q96S95 79 aa6.8□□□□□ -1.32
EXOSC1-202ENST00000370885 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
EXOSC1-202ENST00000370885 J3QR89 54 aa6.79□□□□□ -1.32
EXOSC1-202ENST00000370885 MEIG1Q5JSS6 88 aa6.79□□□□□ -1.32
EXOSC1-202ENST00000370885 DAND5Q8N907 189 aa6.79□□□□□ -1.32
EXOSC1-202ENST00000370885 COPS9Q8WXC6 57 aa6.79□□□□□ -1.32
EXOSC1-202ENST00000370885 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
EXOSC1-202ENST00000370885 NPC2P61916 151 aa6.78□□□□□ -1.32
EXOSC1-202ENST00000370885 KIAA0087Q14695 138 aa6.78□□□□□ -1.32
EXOSC1-202ENST00000370885 C9orf116Q5BN46 136 aaPredicted RBP6.78□□□□□ -1.32
EXOSC1-202ENST00000370885 SFTA2Q6UW10 78 aa6.78□□□□□ -1.32
EXOSC1-202ENST00000370885 UNQ6190/PRO20217Q6UXQ8 127 aa6.78□□□□□ -1.32
EXOSC1-202ENST00000370885 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
EXOSC1-202ENST00000370885 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
EXOSC1-202ENST00000370885 PRO0461Q9UI25 63 aa6.78□□□□□ -1.32
EXOSC1-202ENST00000370885 LOC107984156A0A0G2JMH3 177 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms