RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 MINOS1-NBL1R4GNA1 71 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 CABIN1Q9Y6J0 2220 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 CR1P17927 2039 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 SVILO95425 2214 aa1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGKV3-7A0A075B6H7 116 aa1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 MRPL33O75394 65 aaKnown RBP1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 SPINK7P58062 85 aa1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 COX17Q14061 63 aa1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 DEFB116Q30KQ4 102 aa1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 COA5Q86WW8 74 aa1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 SPRR4Q96PI1 79 aa1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 MED12Q93074 2177 aa1.04□□□□□ -2.24
RNU4-42P-201ENST00000364738 FREM3P0C091 2139 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 ESPL1Q14674 2120 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 KIAA0100Q14667 2235 aaKnown RBP1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGKV3OR2-268A0A0C4DH90 116 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 A0A1B0GU33 70 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGKV2-29A2NJV5 120 aaPredicted RBP1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 CCL22O00626 93 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 RNASE3P12724 160 aaKnown RBP1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 RPS27P42677 84 aaKnown RBP1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 CRIP1P50238 77 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 BRD3OSQ6XYD6 125 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 C9orf163Q8N9P6 203 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 SMIM11BQ8TCY0 68 aa1.03□□□□□ -2.24
RNU4-42P-201ENST00000364738 SDK2Q58EX2 2172 aa1.03□□□□□ -2.25
RNU4-42P-201ENST00000364738 MALRD1Q5VYJ5 2156 aa1.03□□□□□ -2.25
RNU4-42P-201ENST00000364738 DNAJC13O75165 2243 aa1.03□□□□□ -2.25
RNU4-42P-201ENST00000364738 TRGV1A0A0A0MS02 117 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 COL4A2P08572 1712 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 COX7BP24311 80 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 POLR2KP53803 58 aaKnown RBP1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 PRCDQ00LT1 54 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 PIGYQ3MUY2 71 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 PRR9Q5T870 116 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 Q6ZTI0 123 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 DOCK10Q96BY6 2186 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 RNF5Q99942 180 aa1.02□□□□□ -2.25
RNU4-42P-201ENST00000364738 FREM1Q5H8C1 2179 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 IGKV2-40A0A087WW87 121 aaPredicted RBP1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 DEFB131BA0A096LNP1 70 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 A0A1B0GU69 56 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 LINC00959A0A1B0GUT2 108 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 TRBV6-4A0A1B0GX49 114 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 IGKV2D-40P01614 121 aaPredicted RBP1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 LINC00158P58513 81 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 SPINT4Q6UDR6 99 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 ST20-AS1Q8NBB2 130 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 PATE1Q8WXA2 126 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 TNCP24821 2201 aa1.01□□□□□ -2.25
RNU4-42P-201ENST00000364738 DIDO1Q9BTC0 2240 aaKnown RBP1□□□□□ -2.25
RNU4-42P-201ENST00000364738 CACNA1DQ01668 2161 aa1□□□□□ -2.25
RNU4-42P-201ENST00000364738 SPINK9Q5DT21 86 aa1□□□□□ -2.25
RNU4-42P-201ENST00000364738 Q6ZQY7 126 aa1□□□□□ -2.25
RNU4-42P-201ENST00000364738 DEFB132Q7Z7B7 95 aa1□□□□□ -2.25
RNU4-42P-201ENST00000364738 PSORS1C2Q9UIG4 136 aa1□□□□□ -2.25
RNU4-42P-201ENST00000364738 GPR179Q6PRD1 2367 aa1□□□□□ -2.25
RNU4-42P-201ENST00000364738 SHANK1Q9Y566 2161 aa1□□□□□ -2.25
RNU4-42P-201ENST00000364738 KMT2BQ9UMN6 2715 aaPredicted RBP0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 PRRC2BQ5JSZ5 2229 aaKnown RBP0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 A0A087WTM6 91 aa0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 H3BRN7 92 aa0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 RPL39P62891 51 aaKnown RBP0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 LINC00575Q6W349 94 aa0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 Q8IZM0 81 aa0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 LINC00304Q8N9R0 145 aa0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 LINC00472Q9H8W2 130 aa0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 FBN3Q75N90 2809 aa0.99□□□□□ -2.25
RNU4-42P-201ENST00000364738 FCGBPQ9Y6R7 5405 aaPredicted RBP0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 NBDYA0A0U1RRE5 68 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 A0A1W2PNN7 141 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 ACYP2P14621 99 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 RPL37AP61513 92 aaKnown RBP0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 RPL39LQ96EH5 51 aaKnown RBP0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 Q96NJ1 140 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 TP53AIP1Q9HCN2 124 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 PRO2289Q9P1D8 64 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 SPAG17Q6Q759 2223 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 PRR14LQ5THK1 2151 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 ALPK2Q86TB3 2170 aa0.98□□□□□ -2.25
RNU4-42P-201ENST00000364738 COL4A5P29400 1685 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 A0A0G2JQZ4 141 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 SPTY2D1-AS1A0A0U1RR47 76 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 M0R2N4 97 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 ANGP03950 147 aaKnown RBP0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 PRB1P04280 392 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 HRES1P13985 223 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 C5orf56Q8N8D9 126 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 TMEM167AQ8TBQ9 72 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 CCL19Q99731 98 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 CDKN2A-AS1Q9UH64 79 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 SEC16AO15027 2179 aa0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 COL27A1Q8IZC6 1860 aaPredicted RBP0.97□□□□□ -2.25
RNU4-42P-201ENST00000364738 M0QY20 66 aa0.96□□□□□ -2.26
RNU4-42P-201ENST00000364738 LY6G6CO95867 125 aa0.96□□□□□ -2.26
RNU4-42P-201ENST00000364738 IGLV6-57P01721 117 aa0.96□□□□□ -2.26
RNU4-42P-201ENST00000364738 CUL9Q8IWT3 2517 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 MUC6Q6W4X9 2439 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 CACNA1CQ13936 2221 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms