RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 NDUFC2-KCTD14E9PQ53 114 aa11.33□□□□□ -0.6
SCAF1-201ENST00000360565 LINC00575Q6W349 94 aa11.33□□□□□ -0.6
SCAF1-201ENST00000360565 LOC107984640A0A0U1RRK4 108 aa11.31□□□□□ -0.6
SCAF1-201ENST00000360565 EIF4EBP3O60516 100 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-201ENST00000360565 Q6ZRU5 148 aa11.31□□□□□ -0.6
SCAF1-201ENST00000360565 Q8N3U1 123 aa11.31□□□□□ -0.6
SCAF1-201ENST00000360565 ADGRG4Q8IZF6 3080 aa11.3□□□□□ -0.6
SCAF1-201ENST00000360565 MYO15AQ9UKN7 3530 aa11.29□□□□□ -0.6
SCAF1-201ENST00000360565 FAM19A3Q7Z5A8 133 aa11.28□□□□□ -0.6
SCAF1-201ENST00000360565 TRBV7-7A0A0K0K1E9 115 aa11.28□□□□□ -0.6
SCAF1-201ENST00000360565 C10orf25Q5T742 122 aa11.27□□□□□ -0.6
SCAF1-201ENST00000360565 M0R2N4 97 aa11.26□□□□□ -0.61
SCAF1-201ENST00000360565 C5orf47Q569G3 176 aa11.26□□□□□ -0.61
SCAF1-201ENST00000360565 WFDC13Q8IUB5 93 aa11.25□□□□□ -0.61
SCAF1-201ENST00000360565 C2orf48Q96LS8 159 aa11.25□□□□□ -0.61
SCAF1-201ENST00000360565 C1orf137Q5JT78 98 aa11.24□□□□□ -0.61
SCAF1-201ENST00000360565 IL17DQ8TAD2 202 aa11.24□□□□□ -0.61
SCAF1-201ENST00000360565 Q6ZVQ6 151 aa11.23□□□□□ -0.61
SCAF1-201ENST00000360565 KALRNO60229 2985 aa11.23□□□□□ -0.61
SCAF1-201ENST00000360565 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
SCAF1-201ENST00000360565 TRAV7A0A075B6U4 112 aa11.22□□□□□ -0.61
SCAF1-201ENST00000360565 C6orf48Q9UBA6 75 aa11.21□□□□□ -0.61
SCAF1-201ENST00000360565 ATMQ13315 3056 aa11.21□□□□□ -0.62
SCAF1-201ENST00000360565 ESRGQ1W209 222 aa11.21□□□□□ -0.62
SCAF1-201ENST00000360565 CSNK1G2-AS1Q8NCQ2 148 aa11.2□□□□□ -0.62
SCAF1-201ENST00000360565 NDUFC1O43677 76 aa11.2□□□□□ -0.62
SCAF1-201ENST00000360565 GIG44P09565 113 aaPredicted RBP11.19□□□□□ -0.62
SCAF1-201ENST00000360565 PRR4Q16378 134 aa11.18□□□□□ -0.62
SCAF1-201ENST00000360565 Q8NAQ8 132 aa11.18□□□□□ -0.62
SCAF1-201ENST00000360565 LINC01547P58512 204 aaPredicted RBP11.17□□□□□ -0.62
SCAF1-201ENST00000360565 IGKV4-1P06312 121 aa11.17□□□□□ -0.62
SCAF1-201ENST00000360565 BRK1Q8WUW1 75 aa11.17□□□□□ -0.62
SCAF1-201ENST00000360565 FAM30AQ9NZY2 134 aa11.17□□□□□ -0.62
SCAF1-201ENST00000360565 PLAC8L1A1L4L8 177 aa11.16□□□□□ -0.62
SCAF1-201ENST00000360565 REG3GQ6UW15 175 aa11.16□□□□□ -0.62
SCAF1-201ENST00000360565 TEP1Q99973 2627 aaKnown RBP11.16□□□□□ -0.62
SCAF1-201ENST00000360565 FLNCQ14315 2725 aa11.15□□□□□ -0.62
SCAF1-201ENST00000360565 C19orf73Q9NVV2 129 aa11.15□□□□□ -0.62
SCAF1-201ENST00000360565 TNRC18O15417 2968 aaPredicted RBP11.15□□□□□ -0.62
SCAF1-201ENST00000360565 MRPL55Q7Z7F7 128 aaKnown RBP11.15□□□□□ -0.63
SCAF1-201ENST00000360565 LINC01556Q5JQF7 62 aa11.14□□□□□ -0.63
SCAF1-201ENST00000360565 IGSF10Q6WRI0 2623 aa11.14□□□□□ -0.63
SCAF1-201ENST00000360565 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
SCAF1-201ENST00000360565 LRCOL1A6NCL2 159 aa11.14□□□□□ -0.63
SCAF1-201ENST00000360565 GCN1Q92616 2671 aaKnown RBP11.13□□□□□ -0.63
SCAF1-201ENST00000360565 F8WDY8 70 aa11.13□□□□□ -0.63
SCAF1-201ENST00000360565 C4orf48Q5BLP8 95 aa11.13□□□□□ -0.63
SCAF1-201ENST00000360565 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
SCAF1-201ENST00000360565 SPATA3Q8NHX4 192 aa11.12□□□□□ -0.63
SCAF1-201ENST00000360565 IGLV9-49A0A0B4J1Y8 123 aa11.12□□□□□ -0.63
SCAF1-201ENST00000360565 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
SCAF1-201ENST00000360565 Q8N9L7 120 aa11.12□□□□□ -0.63
SCAF1-201ENST00000360565 SPINK6Q6UWN8 80 aa11.11□□□□□ -0.63
SCAF1-201ENST00000360565 TEX15Q9BXT5 2789 aa11.11□□□□□ -0.63
SCAF1-201ENST00000360565 CHKB-CPT1BH3BT56 60 aa11.11□□□□□ -0.63
SCAF1-201ENST00000360565 PRYO14603 147 aa11.1□□□□□ -0.63
SCAF1-201ENST00000360565 C22orf24Q9Y442 160 aa11.1□□□□□ -0.63
SCAF1-201ENST00000360565 ATP5EP56381 51 aaPredicted RBP11.09□□□□□ -0.63
SCAF1-201ENST00000360565 CFAP47Q6ZTR5 3102 aa11.09□□□□□ -0.63
SCAF1-201ENST00000360565 A0A087WSZ3 146 aa11.08□□□□□ -0.64
SCAF1-201ENST00000360565 PRLHP81277 87 aa11.08□□□□□ -0.64
SCAF1-201ENST00000360565 LINC00474Q9P2X8 69 aa11.08□□□□□ -0.64
SCAF1-201ENST00000360565 COL12A1Q99715 3063 aa11.08□□□□□ -0.64
SCAF1-201ENST00000360565 KIAA0087Q14695 138 aa11.07□□□□□ -0.64
SCAF1-201ENST00000360565 H3BNG1 76 aa11.07□□□□□ -0.64
SCAF1-201ENST00000360565 DEFB116Q30KQ4 102 aa11.06□□□□□ -0.64
SCAF1-201ENST00000360565 SMCR5Q8TEV8 140 aa11.06□□□□□ -0.64
SCAF1-201ENST00000360565 KRTAP1-3Q8IUG1 177 aa11.05□□□□□ -0.64
SCAF1-201ENST00000360565 MUC3AQ02505 3323 aa11.05□□□□□ -0.64
SCAF1-201ENST00000360565 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
SCAF1-201ENST00000360565 LINC00167Q96N53 147 aa11.05□□□□□ -0.64
SCAF1-201ENST00000360565 ZZEF1O43149 2961 aa11.05□□□□□ -0.64
SCAF1-201ENST00000360565 CXCL6P80162 114 aa11.05□□□□□ -0.64
SCAF1-201ENST00000360565 TACC2O95359 2948 aa11.04□□□□□ -0.64
SCAF1-201ENST00000360565 ELOF1P60002 83 aaKnown RBP11.04□□□□□ -0.64
SCAF1-201ENST00000360565 Q6ZQT0 140 aa11.04□□□□□ -0.64
SCAF1-201ENST00000360565 Q9BRP9 147 aa11.04□□□□□ -0.64
SCAF1-201ENST00000360565 NBEAL2Q6ZNJ1 2754 aa11.03□□□□□ -0.64
SCAF1-201ENST00000360565 TMEM254Q8TBM7 123 aa11.03□□□□□ -0.64
SCAF1-201ENST00000360565 LRBAP50851 2863 aa11.03□□□□□ -0.64
SCAF1-201ENST00000360565 USP34Q70CQ2 3546 aa11.03□□□□□ -0.64
SCAF1-201ENST00000360565 SMIM26A0A096LP01 95 aa11.02□□□□□ -0.64
SCAF1-201ENST00000360565 LINC00208Q96KT6 92 aa11.02□□□□□ -0.64
SCAF1-201ENST00000360565 UBR5O95071 2799 aaPredicted RBP11.02□□□□□ -0.65
SCAF1-201ENST00000360565 KRTAP10-3P60369 221 aa11.02□□□□□ -0.65
SCAF1-201ENST00000360565 NOTCH1P46531 2555 aa11.01□□□□□ -0.65
SCAF1-201ENST00000360565 LY6G6CO95867 125 aa11.01□□□□□ -0.65
SCAF1-201ENST00000360565 ZNF706Q9Y5V0 76 aaPredicted RBP11.01□□□□□ -0.65
SCAF1-201ENST00000360565 CRYGAP11844 174 aa11.01□□□□□ -0.65
SCAF1-201ENST00000360565 SERP1Q9Y6X1 66 aa11.01□□□□□ -0.65
SCAF1-201ENST00000360565 NUPR2A6NF83 97 aa11□□□□□ -0.65
SCAF1-201ENST00000360565 UNC79Q9P2D8 2635 aa11□□□□□ -0.65
SCAF1-201ENST00000360565 GVQW2A0A096LPI5 108 aaPredicted RBP10.99□□□□□ -0.65
SCAF1-201ENST00000360565 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
SCAF1-201ENST00000360565 ITPR1Q14643 2758 aa10.99□□□□□ -0.65
SCAF1-201ENST00000360565 IGLV6-57P01721 117 aa10.98□□□□□ -0.65
SCAF1-201ENST00000360565 TRBV7-6A0A0J9YX20 115 aa10.98□□□□□ -0.65
SCAF1-201ENST00000360565 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
SCAF1-201ENST00000360565 VPREB1P12018 145 aa10.98□□□□□ -0.65
SCAF1-201ENST00000360565 Q6ZRP5 223 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms