RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 F8P00451 2351 aa14.89□□□□□ -0.03
NKX2-4-201ENST00000351817 CCKP06307 115 aa14.89□□□□□ -0.03
NKX2-4-201ENST00000351817 CYSRT1A8MQ03 144 aa14.88□□□□□ -0.03
NKX2-4-201ENST00000351817 SMIM20Q8N5G0 67 aa14.87□□□□□ -0.03
NKX2-4-201ENST00000351817 WIPF1O43516 503 aa14.86□□□□□ -0.03
NKX2-4-201ENST00000351817 ENHOQ6UWT2 76 aa14.85□□□□□ -0.03
NKX2-4-201ENST00000351817 LINC00526Q96FQ7 95 aa14.85□□□□□ -0.03
NKX2-4-201ENST00000351817 HIST1H4AP62805 103 aaKnown RBP14.84□□□□□ -0.03
NKX2-4-201ENST00000351817 LINC00575Q6W349 94 aa14.84□□□□□ -0.03
NKX2-4-201ENST00000351817 LYPD5Q6UWN5 251 aa14.84□□□□□ -0.03
NKX2-4-201ENST00000351817 GVQW2A0A096LPI5 108 aaPredicted RBP14.83□□□□□ -0.04
NKX2-4-201ENST00000351817 IGKV3D-7A0A0C4DH55 119 aa14.83□□□□□ -0.04
NKX2-4-201ENST00000351817 C3orf22Q8N5N4 141 aa14.82□□□□□ -0.04
NKX2-4-201ENST00000351817 UQCRQO14949 82 aa14.81□□□□□ -0.04
NKX2-4-201ENST00000351817 IGLV6-57P01721 117 aa14.8□□□□□ -0.04
NKX2-4-201ENST00000351817 FLNBO75369 2602 aaKnown RBP14.8□□□□□ -0.04
NKX2-4-201ENST00000351817 ATOX1O00244 68 aa14.8□□□□□ -0.04
NKX2-4-201ENST00000351817 hADV29S1A0JD25 119 aa14.78□□□□□ -0.04
NKX2-4-201ENST00000351817 RPL18AQ02543 176 aaKnown RBP14.78□□□□□ -0.04
NKX2-4-201ENST00000351817 KRTAP24-1Q3LI83 254 aa14.77□□□□□ -0.04
NKX2-4-201ENST00000351817 C9orf153Q5TBE3 101 aa14.77□□□□□ -0.05
NKX2-4-201ENST00000351817 C6orf48Q9UBA6 75 aa14.77□□□□□ -0.05
NKX2-4-201ENST00000351817 COX7CP15954 63 aa14.75□□□□□ -0.05
NKX2-4-201ENST00000351817 H3BNG1 76 aa14.74□□□□□ -0.05
NKX2-4-201ENST00000351817 ZNF561-AS1K7EIQ3 104 aa14.73□□□□□ -0.05
NKX2-4-201ENST00000351817 OXLD1Q5BKU9 147 aa14.73□□□□□ -0.05
NKX2-4-201ENST00000351817 C3orf56Q8N813 242 aa14.73□□□□□ -0.05
NKX2-4-201ENST00000351817 C2orf48Q96LS8 159 aa14.73□□□□□ -0.05
NKX2-4-201ENST00000351817 KPRPQ5T749 579 aaPredicted RBP14.72□□□□□ -0.05
NKX2-4-201ENST00000351817 ATP5EP2Q5VTU8 51 aa14.72□□□□□ -0.05
NKX2-4-201ENST00000351817 WFDC10BQ8IUB3 73 aa14.71□□□□□ -0.05
NKX2-4-201ENST00000351817 TRBV10-3A0A0K0K1G6 114 aa14.7□□□□□ -0.06
NKX2-4-201ENST00000351817 RBM3P98179 157 aaKnown RBP14.7□□□□□ -0.06
NKX2-4-201ENST00000351817 XAGE1AQ9HD64 81 aa14.7□□□□□ -0.06
NKX2-4-201ENST00000351817 KRTAP10-11P60412 298 aa14.7□□□□□ -0.06
NKX2-4-201ENST00000351817 TRAV23DV6A0A075B6W5 121 aa14.69□□□□□ -0.06
NKX2-4-201ENST00000351817 A0A087WVE0 104 aa14.69□□□□□ -0.06
NKX2-4-201ENST00000351817 H3BQ85 93 aa14.69□□□□□ -0.06
NKX2-4-201ENST00000351817 FBN1P35555 2871 aaKnown RBP14.69□□□□□ -0.06
NKX2-4-201ENST00000351817 DIRC1Q969H9 104 aa14.69□□□□□ -0.06
NKX2-4-201ENST00000351817 LAMTOR3Q9UHA4 124 aa14.68□□□□□ -0.06
NKX2-4-201ENST00000351817 LOC110117498A0A087WWA1 95 aa14.68□□□□□ -0.06
NKX2-4-201ENST00000351817 Q6ZQT0 140 aa14.68□□□□□ -0.06
NKX2-4-201ENST00000351817 CAMK2N2Q96S95 79 aa14.68□□□□□ -0.06
NKX2-4-201ENST00000351817 RETNQ9HD89 108 aa14.68□□□□□ -0.06
NKX2-4-201ENST00000351817 KRTAP26-1Q6PEX3 210 aa14.67□□□□□ -0.06
NKX2-4-201ENST00000351817 UBL5Q9BZL1 73 aa14.67□□□□□ -0.06
NKX2-4-201ENST00000351817 HIGD2BQ4VC39 106 aa14.66□□□□□ -0.06
NKX2-4-201ENST00000351817 Q6ZQY7 126 aa14.66□□□□□ -0.06
NKX2-4-201ENST00000351817 C5orf47Q569G3 176 aa14.65□□□□□ -0.06
NKX2-4-201ENST00000351817 USP17L23D6RBM5 183 aa14.65□□□□□ -0.06
NKX2-4-201ENST00000351817 CRYGAP11844 174 aa14.65□□□□□ -0.06
NKX2-4-201ENST00000351817 EGFEM1PQ0D2K5 195 aa14.65□□□□□ -0.06
NKX2-4-201ENST00000351817 Q6ZTC4 211 aa14.64□□□□□ -0.07
NKX2-4-201ENST00000351817 ZNF73O43830 326 aaPredicted RBP14.64□□□□□ -0.07
NKX2-4-201ENST00000351817 SERP2Q8N6R1 65 aa14.62□□□□□ -0.07
NKX2-4-201ENST00000351817 CMYA5Q8N3K9 4069 aa14.62□□□□□ -0.07
NKX2-4-201ENST00000351817 VPREB1P12018 145 aa14.62□□□□□ -0.07
NKX2-4-201ENST00000351817 COX7BP24311 80 aa14.62□□□□□ -0.07
NKX2-4-201ENST00000351817 TRBV7-6A0A0J9YX20 115 aa14.61□□□□□ -0.07
NKX2-4-201ENST00000351817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.61□□□□□ -0.07
NKX2-4-201ENST00000351817 Q6ZRU5 148 aa14.61□□□□□ -0.07
NKX2-4-201ENST00000351817 C15orf56Q8N910 161 aa14.61□□□□□ -0.07
NKX2-4-201ENST00000351817 DSCR8Q96T75 97 aa14.61□□□□□ -0.07
NKX2-4-201ENST00000351817 PDE6GP18545 87 aa14.6□□□□□ -0.07
NKX2-4-201ENST00000351817 ELOF1P60002 83 aaKnown RBP14.6□□□□□ -0.07
NKX2-4-201ENST00000351817 ESRGQ1W209 222 aa14.6□□□□□ -0.07
NKX2-4-201ENST00000351817 M0R378 163 aa14.59□□□□□ -0.07
NKX2-4-201ENST00000351817 GHRHP01286 108 aa14.58□□□□□ -0.07
NKX2-4-201ENST00000351817 NDUFC2-KCTD14E9PQ53 114 aa14.57□□□□□ -0.08
NKX2-4-201ENST00000351817 STAB1Q9NY15 2570 aa14.57□□□□□ -0.08
NKX2-4-201ENST00000351817 C1orf43Q9BWL3 253 aa14.57□□□□□ -0.08
NKX2-4-201ENST00000351817 FAM19A1Q7Z5A9 133 aa14.56□□□□□ -0.08
NKX2-4-201ENST00000351817 PKD1L1Q8TDX9 2849 aa14.55□□□□□ -0.08
NKX2-4-201ENST00000351817 ANK2Q01484 3957 aa14.54□□□□□ -0.08
NKX2-4-201ENST00000351817 F8WDY8 70 aa14.54□□□□□ -0.08
NKX2-4-201ENST00000351817 M0R2N4 97 aa14.54□□□□□ -0.08
NKX2-4-201ENST00000351817 LINC01556Q5JQF7 62 aa14.54□□□□□ -0.08
NKX2-4-201ENST00000351817 UPK3BQ9BT76 320 aa14.52□□□□□ -0.08
NKX2-4-201ENST00000351817 IGKV2D-24A0A075B6R9 120 aa14.5□□□□□ -0.09
NKX2-4-201ENST00000351817 DEFB131BA0A096LNP1 70 aa14.5□□□□□ -0.09
NKX2-4-201ENST00000351817 TRBV7-4A0A0J9YYF1 115 aa14.5□□□□□ -0.09
NKX2-4-201ENST00000351817 RPS28P62857 69 aaKnown RBP14.5□□□□□ -0.09
NKX2-4-201ENST00000351817 Q6ZVQ6 151 aa14.5□□□□□ -0.09
NKX2-4-201ENST00000351817 Q6ZRP5 223 aa14.49□□□□□ -0.09
NKX2-4-201ENST00000351817 LINC00528Q8N1L1 170 aa14.49□□□□□ -0.09
NKX2-4-201ENST00000351817 LINC01547P58512 204 aaPredicted RBP14.48□□□□□ -0.09
NKX2-4-201ENST00000351817 C11orf45Q8TAV5 145 aa14.48□□□□□ -0.09
NKX2-4-201ENST00000351817 DNAH3Q8TD57 4116 aa14.48□□□□□ -0.09
NKX2-4-201ENST00000351817 J3KT08 172 aa14.47□□□□□ -0.09
NKX2-4-201ENST00000351817 SYCNQ0VAF6 134 aa14.47□□□□□ -0.09
NKX2-4-201ENST00000351817 CYSTM1Q9H1C7 97 aa14.46□□□□□ -0.09
NKX2-4-201ENST00000351817 HAMPP81172 84 aa14.46□□□□□ -0.1
NKX2-4-201ENST00000351817 MAST4O15021 2626 aa14.45□□□□□ -0.1
NKX2-4-201ENST00000351817 BAHCC1Q9P281 2608 aa14.43□□□□□ -0.1
NKX2-4-201ENST00000351817 CXCL6P80162 114 aa14.43□□□□□ -0.1
NKX2-4-201ENST00000351817 DNAH10OSP0CZ25 163 aa14.42□□□□□ -0.1
NKX2-4-201ENST00000351817 BCE1O60756 84 aa14.41□□□□□ -0.1
NKX2-4-201ENST00000351817 TMEM258P61165 79 aa14.41□□□□□ -0.1
NKX2-4-201ENST00000351817 NKAPP1Q8N9T2 125 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms