RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 MT3P25713 68 aa5.36□□□□□ -1.55
UBE2D3-204ENST00000349311 RBM3P98179 157 aaKnown RBP5.36□□□□□ -1.55
UBE2D3-204ENST00000349311 ENHOQ6UWT2 76 aa5.36□□□□□ -1.55
UBE2D3-204ENST00000349311 MIR7-3HGQ8N6C7 128 aa5.36□□□□□ -1.55
UBE2D3-204ENST00000349311 COX7B2Q8TF08 81 aa5.36□□□□□ -1.55
UBE2D3-204ENST00000349311 SONP18583 2426 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 IGKV2-28A0A075B6P5 120 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 K7EQG2 157 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 TMEM256-PLSCR3K7ERE1 68 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 LY6G6DO95868 133 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 IGKV2D-28P01615 120 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 SPINK13Q1W4C9 94 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 C9orf129Q5T035 196 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 BRD3OSQ6XYD6 125 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 Q6ZTC4 211 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 FP248Q71RG6 208 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
UBE2D3-204ENST00000349311 IGHV3-73A0A0B4J1V6 119 aa5.34□□□□□ -1.55
UBE2D3-204ENST00000349311 IBA57-AS1B1ANH7 110 aa5.34□□□□□ -1.55
UBE2D3-204ENST00000349311 F8WEM9 126 aa5.34□□□□□ -1.55
UBE2D3-204ENST00000349311 H3BQ85 93 aa5.34□□□□□ -1.55
UBE2D3-204ENST00000349311 LINC00158P58513 81 aa5.34□□□□□ -1.55
UBE2D3-204ENST00000349311 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.34□□□□□ -1.55
UBE2D3-204ENST00000349311 WFDC11Q8NEX6 87 aa5.34□□□□□ -1.55
UBE2D3-204ENST00000349311 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
UBE2D3-204ENST00000349311 SVEP1Q4LDE5 3571 aa5.34□□□□□ -1.56
UBE2D3-204ENST00000349311 TMEM89A2RUT3 159 aa5.33□□□□□ -1.56
UBE2D3-204ENST00000349311 H3BUX3 64 aa5.33□□□□□ -1.56
UBE2D3-204ENST00000349311 ERC2-IT1O76042 136 aa5.33□□□□□ -1.56
UBE2D3-204ENST00000349311 CCL18P55774 89 aa5.33□□□□□ -1.56
UBE2D3-204ENST00000349311 OTOGQ6ZRI0 2925 aa5.33□□□□□ -1.56
UBE2D3-204ENST00000349311 LOC110117498A0A087WWA1 95 aa5.32□□□□□ -1.56
UBE2D3-204ENST00000349311 TRBV6-4A0A1B0GX49 114 aa5.32□□□□□ -1.56
UBE2D3-204ENST00000349311 IGKV3-20P01619 116 aa5.32□□□□□ -1.56
UBE2D3-204ENST00000349311 IGHV3-11P01762 117 aa5.32□□□□□ -1.56
UBE2D3-204ENST00000349311 PDE6GP18545 87 aa5.32□□□□□ -1.56
UBE2D3-204ENST00000349311 CXCL6P80162 114 aa5.32□□□□□ -1.56
UBE2D3-204ENST00000349311 DEFB112Q30KQ8 113 aa5.32□□□□□ -1.56
UBE2D3-204ENST00000349311 MTORP42345 2549 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 IGHV3-38A0A0C4DH36 116 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 TRBV10-1A0A0K0K1A3 114 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 A8MTW9 85 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 K7EQD1 137 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 SS18Q15532 418 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 MAPK1IP1LQ8NDC0 245 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 WFDC9Q8NEX5 89 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 RMI2Q96E14 147 aa5.31□□□□□ -1.56
UBE2D3-204ENST00000349311 NSD1Q96L73 2696 aaPredicted RBP5.3□□□□□ -1.56
UBE2D3-204ENST00000349311 ANK3Q12955 4377 aaKnown RBP5.3□□□□□ -1.56
UBE2D3-204ENST00000349311 MIFP14174 115 aa5.3□□□□□ -1.56
UBE2D3-204ENST00000349311 Q8N814 137 aa5.3□□□□□ -1.56
UBE2D3-204ENST00000349311 DYNLRB2Q8TF09 96 aa5.3□□□□□ -1.56
UBE2D3-204ENST00000349311 CDC42SE2Q9NRR3 84 aa5.3□□□□□ -1.56
UBE2D3-204ENST00000349311 HIVEP2P31629 2446 aa5.3□□□□□ -1.56
UBE2D3-204ENST00000349311 NF1P21359 2839 aa5.3□□□□□ -1.56
UBE2D3-204ENST00000349311 PLAC8L1A1L4L8 177 aa5.29□□□□□ -1.56
UBE2D3-204ENST00000349311 UBE2L6O14933 153 aa5.29□□□□□ -1.56
UBE2D3-204ENST00000349311 IGHV4-59P01825 116 aa5.29□□□□□ -1.56
UBE2D3-204ENST00000349311 LINC01547P58512 204 aaPredicted RBP5.29□□□□□ -1.56
UBE2D3-204ENST00000349311 LY6EQ16553 131 aa5.29□□□□□ -1.56
UBE2D3-204ENST00000349311 C1orf158Q8N1D5 194 aa5.29□□□□□ -1.56
UBE2D3-204ENST00000349311 C11orf68Q9H3H3 251 aaKnown RBP5.29□□□□□ -1.56
UBE2D3-204ENST00000349311 SNURFQ9Y675 71 aa5.29□□□□□ -1.56
UBE2D3-204ENST00000349311 A0A0U1RQV1 116 aa5.28□□□□□ -1.56
UBE2D3-204ENST00000349311 Q6ZQT0 140 aa5.28□□□□□ -1.56
UBE2D3-204ENST00000349311 C6orf223Q8N319 242 aa5.28□□□□□ -1.56
UBE2D3-204ENST00000349311 C11orf72Q8NBR9 251 aa5.28□□□□□ -1.56
UBE2D3-204ENST00000349311 TOMM7Q9P0U1 55 aa5.28□□□□□ -1.56
UBE2D3-204ENST00000349311 TRAV10A0A0B4J240 114 aa5.27□□□□□ -1.57
UBE2D3-204ENST00000349311 INSP01308 110 aa5.27□□□□□ -1.57
UBE2D3-204ENST00000349311 PRR15Q8IV56 129 aa5.27□□□□□ -1.57
UBE2D3-204ENST00000349311 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
UBE2D3-204ENST00000349311 TRBV7-4A0A0J9YYF1 115 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 HTN1P15515 57 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 HAMPP81172 84 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 NREPQ16612 68 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 ESRGQ1W209 222 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 C9orf66Q5T8R8 295 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 Q6ZVQ6 151 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 ZNF702PQ9H963 129 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 HIVEP1P15822 2718 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 F8P00451 2351 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 C2CD3Q4AC94 2353 aa5.26□□□□□ -1.57
UBE2D3-204ENST00000349311 SETD2Q9BYW2 2564 aaPredicted RBP5.25□□□□□ -1.57
UBE2D3-204ENST00000349311 FUSP35637 526 aaKnown RBP eCLIP5.25□□□□□ -1.57
UBE2D3-204ENST00000349311 SPATA3Q8NHX4 192 aa5.25□□□□□ -1.57
UBE2D3-204ENST00000349311 TMEM254Q8TBM7 123 aa5.25□□□□□ -1.57
UBE2D3-204ENST00000349311 Q9UF83 564 aa5.25□□□□□ -1.57
UBE2D3-204ENST00000349311 A0A087WZ39 114 aa5.24□□□□□ -1.57
UBE2D3-204ENST00000349311 PMAIP1Q13794 54 aa5.24□□□□□ -1.57
UBE2D3-204ENST00000349311 NTM-AS1Q6ZSK4 140 aa5.24□□□□□ -1.57
UBE2D3-204ENST00000349311 WNK1Q9H4A3 2382 aa5.23□□□□□ -1.57
UBE2D3-204ENST00000349311 UBE2E2Q96LR5 201 aa5.23□□□□□ -1.57
UBE2D3-204ENST00000349311 DEFB131AP59861 70 aa5.22□□□□□ -1.57
UBE2D3-204ENST00000349311 LINC00575Q6W349 94 aa5.22□□□□□ -1.57
UBE2D3-204ENST00000349311 Q6ZRU5 148 aa5.22□□□□□ -1.57
UBE2D3-204ENST00000349311 Q6ZTI0 123 aa5.22□□□□□ -1.57
UBE2D3-204ENST00000349311 TM2D3Q9BRN9 247 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms