RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CACNA1EQ15878 2313 aa5.55□□□□□ -1.52
TDP1-201ENST00000335725 IGLV1-50A0A075B6I6 118 aa5.54□□□□□ -1.52
TDP1-201ENST00000335725 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
TDP1-201ENST00000335725 DEFB123Q8N688 67 aa5.54□□□□□ -1.52
TDP1-201ENST00000335725 TPRP12270 2363 aaKnown RBP5.54□□□□□ -1.52
TDP1-201ENST00000335725 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
TDP1-201ENST00000335725 C19orf73Q9NVV2 129 aa5.54□□□□□ -1.52
TDP1-201ENST00000335725 CHCHD10Q8WYQ3 142 aaPredicted RBP5.53□□□□□ -1.52
TDP1-201ENST00000335725 TRIOO75962 3097 aa5.53□□□□□ -1.52
TDP1-201ENST00000335725 DEFB105AQ8NG35 78 aa5.53□□□□□ -1.52
TDP1-201ENST00000335725 TNRC18O15417 2968 aaPredicted RBP5.53□□□□□ -1.52
TDP1-201ENST00000335725 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
TDP1-201ENST00000335725 Q8N377 158 aa5.52□□□□□ -1.53
TDP1-201ENST00000335725 CR1P17927 2039 aa5.52□□□□□ -1.53
TDP1-201ENST00000335725 HTTP42858 3142 aa5.52□□□□□ -1.53
TDP1-201ENST00000335725 IGLV5-37A0A075B6J1 123 aa5.51□□□□□ -1.53
TDP1-201ENST00000335725 DEFB131BA0A096LNP1 70 aa5.51□□□□□ -1.53
TDP1-201ENST00000335725 RP1L1Q8IWN7 2480 aaPredicted RBP5.5□□□□□ -1.53
TDP1-201ENST00000335725 GVQW2A0A096LPI5 108 aaPredicted RBP5.5□□□□□ -1.53
TDP1-201ENST00000335725 ROS1P08922 2347 aa5.5□□□□□ -1.53
TDP1-201ENST00000335725 HRES1P13985 223 aa5.5□□□□□ -1.53
TDP1-201ENST00000335725 UNQ6190/PRO20217Q6UXQ8 127 aa5.5□□□□□ -1.53
TDP1-201ENST00000335725 ATP1A1-AS1Q5TC04 95 aa5.5□□□□□ -1.53
TDP1-201ENST00000335725 TMEM105Q8N8V8 129 aa5.5□□□□□ -1.53
TDP1-201ENST00000335725 CEP290O15078 2479 aa5.49□□□□□ -1.53
TDP1-201ENST00000335725 SPTBN2O15020 2390 aa5.49□□□□□ -1.53
TDP1-201ENST00000335725 DHRS4-AS1Q9P1J3 65 aa5.49□□□□□ -1.53
TDP1-201ENST00000335725 APC2O95996 2303 aa5.49□□□□□ -1.53
TDP1-201ENST00000335725 PCOTHQ58A44 107 aa5.49□□□□□ -1.53
TDP1-201ENST00000335725 UQCR11O14957 56 aa5.49□□□□□ -1.53
TDP1-201ENST00000335725 C7orf33Q8WU49 177 aa5.49□□□□□ -1.53
TDP1-201ENST00000335725 PCNX1Q96RV3 2341 aa5.49□□□□□ -1.53
TDP1-201ENST00000335725 CHD7Q9P2D1 2997 aa5.48□□□□□ -1.53
TDP1-201ENST00000335725 A6NDX4 124 aa5.48□□□□□ -1.53
TDP1-201ENST00000335725 CYSRT1A8MQ03 144 aa5.48□□□□□ -1.53
TDP1-201ENST00000335725 TNP2Q05952 138 aa5.48□□□□□ -1.53
TDP1-201ENST00000335725 CLPSL2Q6UWE3 100 aa5.48□□□□□ -1.53
TDP1-201ENST00000335725 NOP10Q9NPE3 64 aaKnown RBP5.47□□□□□ -1.53
TDP1-201ENST00000335725 A0A1B0GU69 56 aa5.47□□□□□ -1.53
TDP1-201ENST00000335725 TP53AIP1Q9HCN2 124 aa5.47□□□□□ -1.53
TDP1-201ENST00000335725 TRIOBPQ9H2D6 2365 aa5.46□□□□□ -1.54
TDP1-201ENST00000335725 KALRNO60229 2985 aa5.46□□□□□ -1.54
TDP1-201ENST00000335725 FREM2Q5SZK8 3169 aa5.46□□□□□ -1.54
TDP1-201ENST00000335725 A8MWP4 228 aa5.46□□□□□ -1.54
TDP1-201ENST00000335725 WNK1Q9H4A3 2382 aa5.45□□□□□ -1.54
TDP1-201ENST00000335725 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
TDP1-201ENST00000335725 DCHS1Q96JQ0 3298 aa5.45□□□□□ -1.54
TDP1-201ENST00000335725 MAP1BP46821 2468 aaKnown RBP5.45□□□□□ -1.54
TDP1-201ENST00000335725 C16orf74Q96GX8 76 aa5.45□□□□□ -1.54
TDP1-201ENST00000335725 KRTAP16-1A8MUX0 517 aa5.44□□□□□ -1.54
TDP1-201ENST00000335725 CACNA1BQ00975 2339 aa5.44□□□□□ -1.54
TDP1-201ENST00000335725 SPEGQ15772 3267 aa5.44□□□□□ -1.54
TDP1-201ENST00000335725 PRUNE2Q8WUY3 3088 aa5.43□□□□□ -1.54
TDP1-201ENST00000335725 WDFY3Q8IZQ1 3526 aa5.43□□□□□ -1.54
TDP1-201ENST00000335725 LY6EQ16553 131 aa5.43□□□□□ -1.54
TDP1-201ENST00000335725 BRD3OSQ6XYD6 125 aa5.43□□□□□ -1.54
TDP1-201ENST00000335725 CDH23Q9H251 3354 aa5.42□□□□□ -1.54
TDP1-201ENST00000335725 IGLV10-54A0A075B6I4 117 aa5.42□□□□□ -1.54
TDP1-201ENST00000335725 ZNF861PO60384 105 aa5.42□□□□□ -1.54
TDP1-201ENST00000335725 LAMA1P25391 3075 aa5.42□□□□□ -1.54
TDP1-201ENST00000335725 ANGP03950 147 aaKnown RBP5.41□□□□□ -1.54
TDP1-201ENST00000335725 ACYP2P14621 99 aa5.41□□□□□ -1.54
TDP1-201ENST00000335725 GYPEP15421 78 aa5.41□□□□□ -1.54
TDP1-201ENST00000335725 CNOT1A5YKK6 2376 aaKnown RBP5.41□□□□□ -1.54
TDP1-201ENST00000335725 PTPRZ1P23471 2315 aaPredicted RBP5.41□□□□□ -1.54
TDP1-201ENST00000335725 C6orf48Q9UBA6 75 aa5.4□□□□□ -1.54
TDP1-201ENST00000335725 A0A1W2PNU3 283 aaPredicted RBP5.4□□□□□ -1.55
TDP1-201ENST00000335725 PATE3B3GLJ2 98 aa5.39□□□□□ -1.55
TDP1-201ENST00000335725 SPTBN5Q9NRC6 3674 aaKnown RBP5.39□□□□□ -1.55
TDP1-201ENST00000335725 IGKV2-24A0A0C4DH68 120 aa5.39□□□□□ -1.55
TDP1-201ENST00000335725 H3BUX3 64 aa5.39□□□□□ -1.55
TDP1-201ENST00000335725 EGFEM1PQ0D2K5 195 aa5.39□□□□□ -1.55
TDP1-201ENST00000335725 AKAP6Q13023 2319 aa5.38□□□□□ -1.55
TDP1-201ENST00000335725 INAFM1C9JVW0 142 aa5.38□□□□□ -1.55
TDP1-201ENST00000335725 RPL37AP61513 92 aaKnown RBP5.38□□□□□ -1.55
TDP1-201ENST00000335725 Q6ZRX8 168 aa5.38□□□□□ -1.55
TDP1-201ENST00000335725 A0A087WSZ3 146 aa5.37□□□□□ -1.55
TDP1-201ENST00000335725 MSMBP08118 114 aa5.37□□□□□ -1.55
TDP1-201ENST00000335725 P0C880 135 aa5.37□□□□□ -1.55
TDP1-201ENST00000335725 DEFB109BQ30KR1 87 aa5.37□□□□□ -1.55
TDP1-201ENST00000335725 REV3LO60673 3130 aa5.37□□□□□ -1.55
TDP1-201ENST00000335725 COL6A6A6NMZ7 2263 aa5.37□□□□□ -1.55
TDP1-201ENST00000335725 CAMK2N2Q96S95 79 aa5.36□□□□□ -1.55
TDP1-201ENST00000335725 CHD9Q3L8U1 2897 aa5.36□□□□□ -1.55
TDP1-201ENST00000335725 LINC00483Q53H64 154 aa5.36□□□□□ -1.55
TDP1-201ENST00000335725 PRR34Q9NV39 138 aa5.36□□□□□ -1.55
TDP1-201ENST00000335725 DSPP15924 2871 aaKnown RBP5.34□□□□□ -1.55
TDP1-201ENST00000335725 IGFL1Q6UW32 110 aa5.33□□□□□ -1.56
TDP1-201ENST00000335725 TRANK1O15050 2925 aa5.33□□□□□ -1.56
TDP1-201ENST00000335725 DMDP11532 3685 aa5.32□□□□□ -1.56
TDP1-201ENST00000335725 MMP24-AS1A0A0U1RRL7 71 aa5.32□□□□□ -1.56
TDP1-201ENST00000335725 CMC4P56277 68 aaPredicted RBP5.32□□□□□ -1.56
TDP1-201ENST00000335725 PRO0255Q9UI72 69 aa5.32□□□□□ -1.56
TDP1-201ENST00000335725 GPR179Q6PRD1 2367 aa5.32□□□□□ -1.56
TDP1-201ENST00000335725 C2CD3Q4AC94 2353 aa5.32□□□□□ -1.56
TDP1-201ENST00000335725 DEFB136Q30KP8 78 aa5.31□□□□□ -1.56
TDP1-201ENST00000335725 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
TDP1-201ENST00000335725 IGLV5-52A0A0A0MRZ9 124 aa5.31□□□□□ -1.56
TDP1-201ENST00000335725 SLURP1P55000 103 aa5.3□□□□□ -1.56
TDP1-201ENST00000335725 CSNK1G2-AS1Q8NCQ2 148 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms