RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 IGKCP01834 107 aa16.75■□□□□ 0.27
ATPAF1-201ENST00000329231 IGLV5-37A0A075B6J1 123 aa16.74■□□□□ 0.27
ATPAF1-201ENST00000329231 NKAPP1Q8N9T2 125 aa16.74■□□□□ 0.27
ATPAF1-201ENST00000329231 HMCN2Q8NDA2 5059 aa16.74■□□□□ 0.27
ATPAF1-201ENST00000329231 LINC00167Q96N53 147 aa16.73■□□□□ 0.27
ATPAF1-201ENST00000329231 ZNF861PO60384 105 aa16.71■□□□□ 0.27
ATPAF1-201ENST00000329231 HERVK_113P61574 105 aa16.71■□□□□ 0.27
ATPAF1-201ENST00000329231 SND1-IT1Q9HBX3 110 aa16.71■□□□□ 0.27
ATPAF1-201ENST00000329231 RPL37AP8A6NKH3 93 aa16.7■□□□□ 0.26
ATPAF1-201ENST00000329231 GAGE10A6NGK3 116 aa16.69■□□□□ 0.26
ATPAF1-201ENST00000329231 LEPROTO15243 131 aa16.69■□□□□ 0.26
ATPAF1-201ENST00000329231 PET117Q6UWS5 81 aa16.69■□□□□ 0.26
ATPAF1-201ENST00000329231 PLEKHB2Q96CS7 222 aa16.69■□□□□ 0.26
ATPAF1-201ENST00000329231 NDUFA12Q9UI09 145 aa16.68■□□□□ 0.26
ATPAF1-201ENST00000329231 BCE1O60756 84 aa16.67■□□□□ 0.26
ATPAF1-201ENST00000329231 HERV-K104P63124 156 aa16.67■□□□□ 0.26
ATPAF1-201ENST00000329231 LINC01545Q5VT33 79 aa16.67■□□□□ 0.26
ATPAF1-201ENST00000329231 MYMXA0A1B0GTQ4 84 aa16.65■□□□□ 0.26
ATPAF1-201ENST00000329231 C3orf79P0CE67 100 aa16.65■□□□□ 0.26
ATPAF1-201ENST00000329231 LINC00158P58513 81 aa16.65■□□□□ 0.26
ATPAF1-201ENST00000329231 TSPEAR-AS2P59090 65 aa16.65■□□□□ 0.26
ATPAF1-201ENST00000329231 RPL24P83731 157 aaKnown RBP16.65■□□□□ 0.26
ATPAF1-201ENST00000329231 PRR26Q8N8Z3 221 aa16.64■□□□□ 0.25
ATPAF1-201ENST00000329231 J3QQQ9 107 aa16.63■□□□□ 0.25
ATPAF1-201ENST00000329231 VPREB1P12018 145 aa16.63■□□□□ 0.25
ATPAF1-201ENST00000329231 RPL28P46779 137 aaKnown RBP16.63■□□□□ 0.25
ATPAF1-201ENST00000329231 IGLV1-50A0A075B6I6 118 aa16.62■□□□□ 0.25
ATPAF1-201ENST00000329231 KRTAP1-4P0C5Y4 121 aa16.62■□□□□ 0.25
ATPAF1-201ENST00000329231 KRTDAPP60985 99 aa16.62■□□□□ 0.25
ATPAF1-201ENST00000329231 MEIG1Q5JSS6 88 aa16.62■□□□□ 0.25
ATPAF1-201ENST00000329231 LINC00587B1AMM8 73 aa16.61■□□□□ 0.25
ATPAF1-201ENST00000329231 A0A0U1RRA0 63 aa16.6■□□□□ 0.25
ATPAF1-201ENST00000329231 SMIM13P0DJ93 91 aa16.6■□□□□ 0.25
ATPAF1-201ENST00000329231 LGALS3P17931 250 aaKnown RBP16.6■□□□□ 0.25
ATPAF1-201ENST00000329231 NMUP48645 174 aa16.6■□□□□ 0.25
ATPAF1-201ENST00000329231 IGKV2-28A0A075B6P5 120 aa16.58■□□□□ 0.24
ATPAF1-201ENST00000329231 E9PLD3 99 aa16.58■□□□□ 0.24
ATPAF1-201ENST00000329231 IGKV2D-28P01615 120 aa16.58■□□□□ 0.24
ATPAF1-201ENST00000329231 C20orf202A1L168 122 aa16.54■□□□□ 0.24
ATPAF1-201ENST00000329231 RPL13AP40429 203 aaKnown RBP16.54■□□□□ 0.24
ATPAF1-201ENST00000329231 UBE2AP49459 152 aa16.54■□□□□ 0.24
ATPAF1-201ENST00000329231 HIST3H2BBQ8N257 126 aa16.54■□□□□ 0.24
ATPAF1-201ENST00000329231 MIR7-3HGQ8N6C7 128 aa16.54■□□□□ 0.24
ATPAF1-201ENST00000329231 Q8NDZ9 215 aa16.53■□□□□ 0.24
ATPAF1-201ENST00000329231 S100A6P06703 90 aa16.52■□□□□ 0.24
ATPAF1-201ENST00000329231 S100A2P29034 98 aa16.51■□□□□ 0.23
ATPAF1-201ENST00000329231 KRTAP13-1Q8IUC0 172 aa16.5■□□□□ 0.23
ATPAF1-201ENST00000329231 HIST1H2BLQ99880 126 aa16.49■□□□□ 0.23
ATPAF1-201ENST00000329231 TMEM126AQ9H061 195 aa16.49■□□□□ 0.23
ATPAF1-201ENST00000329231 TMEM238C9JI98 176 aa16.47■□□□□ 0.23
ATPAF1-201ENST00000329231 AKR1D1P51857 326 aa16.47■□□□□ 0.23
ATPAF1-201ENST00000329231 BOD1L2Q8IYS8 172 aa16.47■□□□□ 0.23
ATPAF1-201ENST00000329231 M0R378 163 aa16.46■□□□□ 0.23
ATPAF1-201ENST00000329231 FAM19A1Q7Z5A9 133 aa16.45■□□□□ 0.22
ATPAF1-201ENST00000329231 A0A0J9YXY3 114 aa16.44■□□□□ 0.22
ATPAF1-201ENST00000329231 DAND5Q8N907 189 aa16.44■□□□□ 0.22
ATPAF1-201ENST00000329231 IGKV2D-26A0A0A0MRZ7 120 aa16.43■□□□□ 0.22
ATPAF1-201ENST00000329231 LOC107984156A0A0G2JMH3 177 aa16.42■□□□□ 0.22
ATPAF1-201ENST00000329231 PRLHP81277 87 aa16.42■□□□□ 0.22
ATPAF1-201ENST00000329231 ARL17AQ8IVW1 177 aa16.42■□□□□ 0.22
ATPAF1-201ENST00000329231 SNRPEP62304 92 aaKnown RBP16.41■□□□□ 0.22
ATPAF1-201ENST00000329231 ATOH7Q8N100 152 aa16.4■□□□□ 0.22
ATPAF1-201ENST00000329231 CRYGAP11844 174 aa16.39■□□□□ 0.21
ATPAF1-201ENST00000329231 ZNF815PA8K554 130 aa16.38■□□□□ 0.21
ATPAF1-201ENST00000329231 NCR3O14931 201 aa16.37■□□□□ 0.21
ATPAF1-201ENST00000329231 MIEN1Q9BRT3 115 aa16.37■□□□□ 0.21
ATPAF1-201ENST00000329231 A0A087X002 238 aa16.36■□□□□ 0.21
ATPAF1-201ENST00000329231 C5orf52A6NGY3 159 aa16.36■□□□□ 0.21
ATPAF1-201ENST00000329231 ANKRD39Q53RE8 183 aa16.36■□□□□ 0.21
ATPAF1-201ENST00000329231 ADAMTSL4-AS1Q5T5F5 129 aa16.36■□□□□ 0.21
ATPAF1-201ENST00000329231 TTTY13Q9BZ97 58 aa16.35■□□□□ 0.21
ATPAF1-201ENST00000329231 TIMM17BO60830 172 aa16.34■□□□□ 0.21
ATPAF1-201ENST00000329231 PRYO14603 147 aa16.33■□□□□ 0.2
ATPAF1-201ENST00000329231 ANAPC11Q9NYG5 84 aa16.33■□□□□ 0.2
ATPAF1-201ENST00000329231 FAM229BQ4G0N7 80 aa16.32■□□□□ 0.2
ATPAF1-201ENST00000329231 UBR4Q5T4S7 5183 aa16.32■□□□□ 0.2
ATPAF1-201ENST00000329231 TYMSOSQ8TAI1 123 aa16.32■□□□□ 0.2
ATPAF1-201ENST00000329231 LITAFQ99732 161 aa16.32■□□□□ 0.2
ATPAF1-201ENST00000329231 KCNQ1DNQ9H478 68 aa16.31■□□□□ 0.2
ATPAF1-201ENST00000329231 SOSTDC1Q6X4U4 206 aa16.3■□□□□ 0.2
ATPAF1-201ENST00000329231 TRBV10-2A0A0K0K1G8 114 aa16.29■□□□□ 0.2
ATPAF1-201ENST00000329231 NDUFC2O95298 119 aa16.29■□□□□ 0.2
ATPAF1-201ENST00000329231 NPC2P61916 151 aa16.29■□□□□ 0.2
ATPAF1-201ENST00000329231 HIGD2AQ9BW72 106 aa16.29■□□□□ 0.2
ATPAF1-201ENST00000329231 TRBV10-3A0A0K0K1G6 114 aa16.28■□□□□ 0.2
ATPAF1-201ENST00000329231 S100A12P80511 92 aa16.28■□□□□ 0.2
ATPAF1-201ENST00000329231 SPANXB1Q9NS25 103 aaPredicted RBP16.28■□□□□ 0.2
ATPAF1-201ENST00000329231 LRP2P98164 4655 aa16.28■□□□□ 0.2
ATPAF1-201ENST00000329231 LINC00337Q8N6G1 96 aa16.27■□□□□ 0.2
ATPAF1-201ENST00000329231 EIF4EBP3O60516 100 aaPredicted RBP16.26■□□□□ 0.19
ATPAF1-201ENST00000329231 SPRR1AP35321 89 aa16.26■□□□□ 0.19
ATPAF1-201ENST00000329231 SCGB1D4Q6XE38 83 aa16.25■□□□□ 0.19
ATPAF1-201ENST00000329231 LINC00308Q8TCZ7 52 aa16.25■□□□□ 0.19
ATPAF1-201ENST00000329231 KRTAP13-2Q52LG2 175 aa16.24■□□□□ 0.19
ATPAF1-201ENST00000329231 PCP2Q8IVA1 136 aa16.24■□□□□ 0.19
ATPAF1-201ENST00000329231 ETDCA0A1B0GVM5 59 aa16.23■□□□□ 0.19
ATPAF1-201ENST00000329231 HSBP1L1C9JCN9 74 aa16.23■□□□□ 0.19
ATPAF1-201ENST00000329231 SCGB1D1O95968 90 aa16.22■□□□□ 0.19
ATPAF1-201ENST00000329231 DDTP30046 118 aa16.22■□□□□ 0.19
ATPAF1-201ENST00000329231 KRTAP4-16G5E9R7 235 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms