RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SERP1Q9Y6X1 66 aa11.27□□□□□ -0.61
CCDC8-201ENST00000307522 FAM229BQ4G0N7 80 aa11.26□□□□□ -0.61
CCDC8-201ENST00000307522 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
CCDC8-201ENST00000307522 TM2D3Q9BRN9 247 aa11.26□□□□□ -0.61
CCDC8-201ENST00000307522 OVOL2Q9BRP0 275 aa11.26□□□□□ -0.61
CCDC8-201ENST00000307522 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
CCDC8-201ENST00000307522 MGAM2Q2M2H8 2515 aa11.26□□□□□ -0.61
CCDC8-201ENST00000307522 C6orf226Q5I0X4 101 aa11.25□□□□□ -0.61
CCDC8-201ENST00000307522 LAMTOR3Q9UHA4 124 aa11.25□□□□□ -0.61
CCDC8-201ENST00000307522 LRCOL1A6NCL2 159 aa11.24□□□□□ -0.61
CCDC8-201ENST00000307522 INSP01308 110 aa11.24□□□□□ -0.61
CCDC8-201ENST00000307522 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
CCDC8-201ENST00000307522 TRBV7-6A0A0J9YX20 115 aa11.24□□□□□ -0.61
CCDC8-201ENST00000307522 DEFB130BP0DP73 79 aa11.24□□□□□ -0.61
CCDC8-201ENST00000307522 DEFB130AP0DP74 79 aa11.24□□□□□ -0.61
CCDC8-201ENST00000307522 A0A096LPF7 62 aa11.23□□□□□ -0.61
CCDC8-201ENST00000307522 Q8N814 137 aa11.23□□□□□ -0.61
CCDC8-201ENST00000307522 Q8N9L7 120 aa11.22□□□□□ -0.61
CCDC8-201ENST00000307522 K7EQD1 137 aa11.22□□□□□ -0.61
CCDC8-201ENST00000307522 TRBV6-4A0A1B0GX49 114 aa11.21□□□□□ -0.62
CCDC8-201ENST00000307522 LINC01547P58512 204 aaPredicted RBP11.21□□□□□ -0.62
CCDC8-201ENST00000307522 DAD1P61803 113 aa11.21□□□□□ -0.62
CCDC8-201ENST00000307522 C6orf99Q4VX62 202 aa11.21□□□□□ -0.62
CCDC8-201ENST00000307522 TRGV2A0A075B6R0 118 aa11.2□□□□□ -0.62
CCDC8-201ENST00000307522 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
CCDC8-201ENST00000307522 PRB2P02812 416 aaPredicted RBP11.19□□□□□ -0.62
CCDC8-201ENST00000307522 NANOS2P60321 138 aaKnown RBP11.19□□□□□ -0.62
CCDC8-201ENST00000307522 Q8N3U1 123 aa11.19□□□□□ -0.62
CCDC8-201ENST00000307522 TRAV7A0A075B6U4 112 aa11.18□□□□□ -0.62
CCDC8-201ENST00000307522 GIG44P09565 113 aaPredicted RBP11.18□□□□□ -0.62
CCDC8-201ENST00000307522 TENM3Q9P273 2699 aa11.18□□□□□ -0.62
CCDC8-201ENST00000307522 SMIM26A0A096LP01 95 aa11.18□□□□□ -0.62
CCDC8-201ENST00000307522 A0A087WZ39 114 aa11.17□□□□□ -0.62
CCDC8-201ENST00000307522 C1orf195Q5TG92 126 aa11.17□□□□□ -0.62
CCDC8-201ENST00000307522 JMJD7-PLA2G4BH0Y9G9 81 aa11.16□□□□□ -0.62
CCDC8-201ENST00000307522 Q6ZVQ6 151 aa11.16□□□□□ -0.62
CCDC8-201ENST00000307522 Q8NDZ9 215 aa11.16□□□□□ -0.62
CCDC8-201ENST00000307522 IGLV10-54A0A075B6I4 117 aa11.16□□□□□ -0.62
CCDC8-201ENST00000307522 SEC61GP60059 68 aa11.16□□□□□ -0.62
CCDC8-201ENST00000307522 IGHV3OR16-9A0A0B4J2B5 98 aa11.15□□□□□ -0.62
CCDC8-201ENST00000307522 TMEM256-PLSCR3K7ERE1 68 aa11.15□□□□□ -0.62
CCDC8-201ENST00000307522 IBA57-AS1B1ANH7 110 aa11.14□□□□□ -0.63
CCDC8-201ENST00000307522 TRBV10-1A0A0K0K1A3 114 aa11.14□□□□□ -0.63
CCDC8-201ENST00000307522 CYSRT1A8MQ03 144 aa11.14□□□□□ -0.63
CCDC8-201ENST00000307522 IGLV1-51P01701 117 aa11.14□□□□□ -0.63
CCDC8-201ENST00000307522 DEFB135Q30KP9 77 aa11.14□□□□□ -0.63
CCDC8-201ENST00000307522 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
CCDC8-201ENST00000307522 ATP5EP2Q5VTU8 51 aa11.13□□□□□ -0.63
CCDC8-201ENST00000307522 V9GYY9 64 aa11.13□□□□□ -0.63
CCDC8-201ENST00000307522 EPM2AB3EWF7 344 aa11.12□□□□□ -0.63
CCDC8-201ENST00000307522 HTN3P15516 51 aa11.12□□□□□ -0.63
CCDC8-201ENST00000307522 Q6ZQT0 140 aa11.12□□□□□ -0.63
CCDC8-201ENST00000307522 KLKP1Q107X0 134 aa11.11□□□□□ -0.63
CCDC8-201ENST00000307522 IL17DQ8TAD2 202 aa11.11□□□□□ -0.63
CCDC8-201ENST00000307522 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
CCDC8-201ENST00000307522 TRGV4A0A0C4DH28 118 aa11.11□□□□□ -0.63
CCDC8-201ENST00000307522 LINC00269Q8N2A0 174 aa11.11□□□□□ -0.63
CCDC8-201ENST00000307522 OXLD1Q5BKU9 147 aa11.1□□□□□ -0.63
CCDC8-201ENST00000307522 FAM19A3Q7Z5A8 133 aa11.1□□□□□ -0.63
CCDC8-201ENST00000307522 MIFP14174 115 aa11.1□□□□□ -0.63
CCDC8-201ENST00000307522 Q6ZQY7 126 aa11.09□□□□□ -0.63
CCDC8-201ENST00000307522 F8WDY8 70 aa11.09□□□□□ -0.63
CCDC8-201ENST00000307522 LINC00959A0A1B0GUT2 108 aa11.06□□□□□ -0.64
CCDC8-201ENST00000307522 NREPQ16612 68 aa11.06□□□□□ -0.64
CCDC8-201ENST00000307522 ANK2Q01484 3957 aa11.05□□□□□ -0.64
CCDC8-201ENST00000307522 TMEM254Q8TBM7 123 aa11.05□□□□□ -0.64
CCDC8-201ENST00000307522 BPY2O14599 106 aa11.04□□□□□ -0.64
CCDC8-201ENST00000307522 PLAC8L1A1L4L8 177 aa11.03□□□□□ -0.64
CCDC8-201ENST00000307522 PRR4Q16378 134 aa11.03□□□□□ -0.64
CCDC8-201ENST00000307522 TRBV6-8A0A0A6YYG3 113 aa11.03□□□□□ -0.64
CCDC8-201ENST00000307522 C6orf223Q8N319 242 aa11.03□□□□□ -0.64
CCDC8-201ENST00000307522 TRBV7-4A0A0J9YYF1 115 aa11.02□□□□□ -0.64
CCDC8-201ENST00000307522 HIGD2AQ9BW72 106 aa11.02□□□□□ -0.64
CCDC8-201ENST00000307522 CELA1Q9UNI1 258 aa11.02□□□□□ -0.64
CCDC8-201ENST00000307522 TRBV10-3A0A0K0K1G6 114 aa11.02□□□□□ -0.65
CCDC8-201ENST00000307522 LINC00167Q96N53 147 aa11.02□□□□□ -0.65
CCDC8-201ENST00000307522 RETNQ9HD89 108 aa11.02□□□□□ -0.65
CCDC8-201ENST00000307522 LINC00575Q6W349 94 aa11.01□□□□□ -0.65
CCDC8-201ENST00000307522 CSNK1G2-AS1Q8NCQ2 148 aa11.01□□□□□ -0.65
CCDC8-201ENST00000307522 ZNF561-AS1K7EIQ3 104 aa10.99□□□□□ -0.65
CCDC8-201ENST00000307522 C10orf25Q5T742 122 aa10.99□□□□□ -0.65
CCDC8-201ENST00000307522 PSPHP1O15172 72 aa10.98□□□□□ -0.65
CCDC8-201ENST00000307522 XAGE1AQ9HD64 81 aa10.98□□□□□ -0.65
CCDC8-201ENST00000307522 MUC7Q8TAX7 377 aa10.98□□□□□ -0.65
CCDC8-201ENST00000307522 C3orf84H3BNL1 204 aa10.97□□□□□ -0.65
CCDC8-201ENST00000307522 IGHV4-28A0A0C4DH34 117 aa10.96□□□□□ -0.66
CCDC8-201ENST00000307522 GYPEP15421 78 aa10.96□□□□□ -0.66
CCDC8-201ENST00000307522 FUSP35637 526 aaKnown RBP eCLIP10.96□□□□□ -0.66
CCDC8-201ENST00000307522 C16orf74Q96GX8 76 aa10.96□□□□□ -0.66
CCDC8-201ENST00000307522 UNQ6190/PRO20217Q6UXQ8 127 aa10.95□□□□□ -0.66
CCDC8-201ENST00000307522 A8MU10 97 aa10.94□□□□□ -0.66
CCDC8-201ENST00000307522 FAM30AQ9NZY2 134 aa10.94□□□□□ -0.66
CCDC8-201ENST00000307522 KRTAP24-1Q3LI83 254 aa10.94□□□□□ -0.66
CCDC8-201ENST00000307522 PRYO14603 147 aa10.92□□□□□ -0.66
CCDC8-201ENST00000307522 ESRGQ1W209 222 aa10.92□□□□□ -0.66
CCDC8-201ENST00000307522 CD164L2Q6UWJ8 174 aa10.92□□□□□ -0.66
CCDC8-201ENST00000307522 X6R8D5 127 aa10.92□□□□□ -0.66
CCDC8-201ENST00000307522 TENM2Q9NT68 2774 aa10.92□□□□□ -0.66
CCDC8-201ENST00000307522 KLK12Q9UKR0 248 aa10.92□□□□□ -0.66
CCDC8-201ENST00000307522 LOC110117498A0A087WWA1 95 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms