RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 WNK1Q9H4A3 2382 aa9.11□□□□□ -0.95
RPUSD4-201ENST00000298317 MYO9AB2RTY4 2548 aa9.11□□□□□ -0.95
RPUSD4-201ENST00000298317 A0A096LPF7 62 aa9.11□□□□□ -0.95
RPUSD4-201ENST00000298317 BPY2O14599 106 aa9.11□□□□□ -0.95
RPUSD4-201ENST00000298317 REG3AQ06141 175 aa9.11□□□□□ -0.95
RPUSD4-201ENST00000298317 A0A0J9YWU9 116 aa9.1□□□□□ -0.95
RPUSD4-201ENST00000298317 IGHV4-30-4P0DP06 118 aa9.1□□□□□ -0.95
RPUSD4-201ENST00000298317 UNQ6190/PRO20217Q6UXQ8 127 aa9.1□□□□□ -0.95
RPUSD4-201ENST00000298317 IGLV1-51P01701 117 aa9.1□□□□□ -0.95
RPUSD4-201ENST00000298317 ITPR1Q14643 2758 aa9.1□□□□□ -0.95
RPUSD4-201ENST00000298317 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
RPUSD4-201ENST00000298317 BBC3Q96PG8 261 aaPredicted RBP9.1□□□□□ -0.95
RPUSD4-201ENST00000298317 PRO0255Q9UI72 69 aa9.1□□□□□ -0.95
RPUSD4-201ENST00000298317 SETXQ7Z333 2677 aaKnown RBP9.09□□□□□ -0.95
RPUSD4-201ENST00000298317 SPAG11BQ08648 103 aa9.09□□□□□ -0.95
RPUSD4-201ENST00000298317 DOPEY1Q5JWR5 2465 aa9.09□□□□□ -0.95
RPUSD4-201ENST00000298317 ANGP03950 147 aaKnown RBP9.08□□□□□ -0.96
RPUSD4-201ENST00000298317 TLN2Q9Y4G6 2542 aa9.07□□□□□ -0.96
RPUSD4-201ENST00000298317 JMJD1CQ15652 2540 aa9.07□□□□□ -0.96
RPUSD4-201ENST00000298317 COX7BP24311 80 aa9.07□□□□□ -0.96
RPUSD4-201ENST00000298317 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
RPUSD4-201ENST00000298317 ANKRD17O75179 2603 aaKnown RBP9.06□□□□□ -0.96
RPUSD4-201ENST00000298317 ZNF73O43830 326 aaPredicted RBP9.06□□□□□ -0.96
RPUSD4-201ENST00000298317 IGKV4-1P06312 121 aa9.06□□□□□ -0.96
RPUSD4-201ENST00000298317 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
RPUSD4-201ENST00000298317 OCR1Q9BZK8 76 aa9.06□□□□□ -0.96
RPUSD4-201ENST00000298317 USP9XQ93008 2570 aaPredicted RBP9.06□□□□□ -0.96
RPUSD4-201ENST00000298317 PRYO14603 147 aa9.05□□□□□ -0.96
RPUSD4-201ENST00000298317 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
RPUSD4-201ENST00000298317 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
RPUSD4-201ENST00000298317 FBN2P35556 2912 aa9.04□□□□□ -0.96
RPUSD4-201ENST00000298317 DNAJC9-AS1A6NH13 148 aa9.04□□□□□ -0.96
RPUSD4-201ENST00000298317 Q6ZTC4 211 aa9.04□□□□□ -0.96
RPUSD4-201ENST00000298317 Q8N9L7 120 aa9.03□□□□□ -0.96
RPUSD4-201ENST00000298317 FUSP35637 526 aaKnown RBP eCLIP9.03□□□□□ -0.967e-7■■■■□ 20.9
RPUSD4-201ENST00000298317 DAD1P61803 113 aa9.03□□□□□ -0.96
RPUSD4-201ENST00000298317 X6R8D5 127 aa9.03□□□□□ -0.96
RPUSD4-201ENST00000298317 CELA1Q9UNI1 258 aa9.01□□□□□ -0.97
RPUSD4-201ENST00000298317 CHD8Q9HCK8 2581 aa9.01□□□□□ -0.97
RPUSD4-201ENST00000298317 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
RPUSD4-201ENST00000298317 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
RPUSD4-201ENST00000298317 Q1T7F1 81 aa9□□□□□ -0.97
RPUSD4-201ENST00000298317 NIPBLQ6KC79 2804 aaeCLIP8.99□□□□□ -0.97
RPUSD4-201ENST00000298317 POLQO75417 2590 aa8.99□□□□□ -0.97
RPUSD4-201ENST00000298317 TEX15Q9BXT5 2789 aa8.99□□□□□ -0.97
RPUSD4-201ENST00000298317 ESM1Q9NQ30 184 aa8.99□□□□□ -0.97
RPUSD4-201ENST00000298317 FLNCQ14315 2725 aa8.99□□□□□ -0.97
RPUSD4-201ENST00000298317 EPG5Q9HCE0 2579 aa8.98□□□□□ -0.97
RPUSD4-201ENST00000298317 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
RPUSD4-201ENST00000298317 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
RPUSD4-201ENST00000298317 LYRM9A8MSI8 78 aa8.97□□□□□ -0.97
RPUSD4-201ENST00000298317 VPREB1P12018 145 aa8.97□□□□□ -0.97
RPUSD4-201ENST00000298317 Q6ZRP5 223 aa8.97□□□□□ -0.97
RPUSD4-201ENST00000298317 PRR34Q9NV39 138 aa8.97□□□□□ -0.97
RPUSD4-201ENST00000298317 CFAP46Q8IYW2 2715 aa8.97□□□□□ -0.97
RPUSD4-201ENST00000298317 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
RPUSD4-201ENST00000298317 HIGD2AQ9BW72 106 aa8.97□□□□□ -0.97
RPUSD4-201ENST00000298317 hDV103S1A0JD37 113 aa8.96□□□□□ -0.97
RPUSD4-201ENST00000298317 ZNF469Q96JG9 3925 aaPredicted RBP8.96□□□□□ -0.97
RPUSD4-201ENST00000298317 KRTAP10-9P60411 292 aa8.94□□□□□ -0.98
RPUSD4-201ENST00000298317 DEFB113Q30KQ7 82 aa8.94□□□□□ -0.98
RPUSD4-201ENST00000298317 FN1P02751 2386 aaKnown RBP8.94□□□□□ -0.98
RPUSD4-201ENST00000298317 M0R378 163 aa8.93□□□□□ -0.98
RPUSD4-201ENST00000298317 HIGD2BQ4VC39 106 aa8.93□□□□□ -0.98
RPUSD4-201ENST00000298317 LELP1Q5T871 98 aa8.93□□□□□ -0.98
RPUSD4-201ENST00000298317 LCE6AA0A183 80 aa8.93□□□□□ -0.98
RPUSD4-201ENST00000298317 KLK12Q9UKR0 248 aa8.93□□□□□ -0.98
RPUSD4-201ENST00000298317 SPTBN4Q9H254 2564 aa8.92□□□□□ -0.98
RPUSD4-201ENST00000298317 C3orf84H3BNL1 204 aa8.92□□□□□ -0.98
RPUSD4-201ENST00000298317 LRRK2Q5S007 2527 aa8.92□□□□□ -0.98
RPUSD4-201ENST00000298317 PTPN13Q12923 2485 aa8.91□□□□□ -0.98
RPUSD4-201ENST00000298317 PRB1P04280 392 aa8.91□□□□□ -0.98
RPUSD4-201ENST00000298317 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
RPUSD4-201ENST00000298317 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
RPUSD4-201ENST00000298317 LRCOL1A6NCL2 159 aa8.91□□□□□ -0.98
RPUSD4-201ENST00000298317 PSPHP1O15172 72 aa8.9□□□□□ -0.98
RPUSD4-201ENST00000298317 SMIM29Q86T20 159 aa8.9□□□□□ -0.98
RPUSD4-201ENST00000298317 DEFB4AO15263 64 aa8.9□□□□□ -0.99
RPUSD4-201ENST00000298317 NF1P21359 2839 aa8.89□□□□□ -0.99
RPUSD4-201ENST00000298317 PKD1L2Q7Z442 2459 aa8.89□□□□□ -0.99
RPUSD4-201ENST00000298317 NAV2Q8IVL1 2488 aa8.89□□□□□ -0.99
RPUSD4-201ENST00000298317 IGLV5-48A0A075B6I7 105 aa8.88□□□□□ -0.99
RPUSD4-201ENST00000298317 TRAV22A0A0B4J277 110 aa8.88□□□□□ -0.99
RPUSD4-201ENST00000298317 EGFEM1PQ0D2K5 195 aa8.88□□□□□ -0.99
RPUSD4-201ENST00000298317 FAM30AQ9NZY2 134 aa8.88□□□□□ -0.99
RPUSD4-201ENST00000298317 APCP25054 2843 aa8.88□□□□□ -0.99
RPUSD4-201ENST00000298317 KTN1-AS1Q86SY8 53 aa8.88□□□□□ -0.99
RPUSD4-201ENST00000298317 C1orf64Q8NEQ6 169 aa8.87□□□□□ -0.99
RPUSD4-201ENST00000298317 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
RPUSD4-201ENST00000298317 ZCCHC13Q8WW36 166 aaKnown RBP8.86□□□□□ -0.99
RPUSD4-201ENST00000298317 ZFYVE26Q68DK2 2539 aa8.86□□□□□ -0.99
RPUSD4-201ENST00000298317 A0A1B0GW54 56 aa8.86□□□□□ -0.99
RPUSD4-201ENST00000298317 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
RPUSD4-201ENST00000298317 KPRPQ5T749 579 aaPredicted RBP8.86□□□□□ -0.99
RPUSD4-201ENST00000298317 Q8N377 158 aa8.86□□□□□ -0.99
RPUSD4-201ENST00000298317 SONP18583 2426 aaKnown RBP8.86□□□□□ -0.99
RPUSD4-201ENST00000298317 ANK3Q12955 4377 aaKnown RBP8.85□□□□□ -0.99
RPUSD4-201ENST00000298317 ACACBO00763 2458 aa8.85□□□□□ -0.99
RPUSD4-201ENST00000298317 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
RPUSD4-201ENST00000298317 DEFB135Q30KP9 77 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms