RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 UQCRQO14949 82 aa10.31□□□□□ -0.76
DDX56-201ENST00000258772 IGHV4-30-4P0DP06 118 aa10.31□□□□□ -0.76
DDX56-201ENST00000258772 MUC7Q8TAX7 377 aa10.31□□□□□ -0.76
DDX56-201ENST00000258772 TENM1Q9UKZ4 2725 aa10.3□□□□□ -0.76
DDX56-201ENST00000258772 LINC00575Q6W349 94 aa10.29□□□□□ -0.76
DDX56-201ENST00000258772 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
DDX56-201ENST00000258772 ENHOQ6UWT2 76 aa10.29□□□□□ -0.76
DDX56-201ENST00000258772 ATOX1O00244 68 aa10.28□□□□□ -0.76
DDX56-201ENST00000258772 COX7CP15954 63 aa10.28□□□□□ -0.76
DDX56-201ENST00000258772 KMT2BQ9UMN6 2715 aaPredicted RBP10.27□□□□□ -0.76
DDX56-201ENST00000258772 SEC61GP60059 68 aa10.27□□□□□ -0.77
DDX56-201ENST00000258772 C2orf48Q96LS8 159 aa10.27□□□□□ -0.77
DDX56-201ENST00000258772 NSD1Q96L73 2696 aaPredicted RBP10.27□□□□□ -0.77
DDX56-201ENST00000258772 TRRAPQ9Y4A5 3859 aa10.26□□□□□ -0.77
DDX56-201ENST00000258772 IGLV6-57P01721 117 aa10.26□□□□□ -0.77
DDX56-201ENST00000258772 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
DDX56-201ENST00000258772 LYPD5Q6UWN5 251 aa10.26□□□□□ -0.77
DDX56-201ENST00000258772 WFDC9Q8NEX5 89 aa10.26□□□□□ -0.77
DDX56-201ENST00000258772 OTOGQ6ZRI0 2925 aa10.26□□□□□ -0.77
DDX56-201ENST00000258772 GVQW2A0A096LPI5 108 aaPredicted RBP10.25□□□□□ -0.77
DDX56-201ENST00000258772 ATRQ13535 2644 aa10.25□□□□□ -0.77
DDX56-201ENST00000258772 HECTD1Q9ULT8 2610 aa10.25□□□□□ -0.77
DDX56-201ENST00000258772 A0A087WVE0 104 aa10.25□□□□□ -0.77
DDX56-201ENST00000258772 hADV29S1A0JD25 119 aa10.25□□□□□ -0.77
DDX56-201ENST00000258772 SMIM20Q8N5G0 67 aa10.24□□□□□ -0.77
DDX56-201ENST00000258772 C6orf48Q9UBA6 75 aa10.23□□□□□ -0.77
DDX56-201ENST00000258772 TEP1Q99973 2627 aaKnown RBP10.23□□□□□ -0.77
DDX56-201ENST00000258772 RBM3P98179 157 aaKnown RBP10.21□□□□□ -0.77
DDX56-201ENST00000258772 HIVEP1P15822 2718 aa10.21□□□□□ -0.78
DDX56-201ENST00000258772 XAGE1AQ9HD64 81 aa10.21□□□□□ -0.78
DDX56-201ENST00000258772 TRBV10-3A0A0K0K1G6 114 aa10.2□□□□□ -0.78
DDX56-201ENST00000258772 ZNF561-AS1K7EIQ3 104 aa10.2□□□□□ -0.78
DDX56-201ENST00000258772 CRYGAP11844 174 aa10.2□□□□□ -0.78
DDX56-201ENST00000258772 USP17L23D6RBM5 183 aa10.19□□□□□ -0.78
DDX56-201ENST00000258772 ATP5EP2Q5VTU8 51 aa10.19□□□□□ -0.78
DDX56-201ENST00000258772 Q6ZQT0 140 aa10.19□□□□□ -0.78
DDX56-201ENST00000258772 LAMTOR3Q9UHA4 124 aa10.19□□□□□ -0.78
DDX56-201ENST00000258772 Q6ZQY7 126 aa10.18□□□□□ -0.78
DDX56-201ENST00000258772 WFDC10BQ8IUB3 73 aa10.18□□□□□ -0.78
DDX56-201ENST00000258772 UBL5Q9BZL1 73 aa10.18□□□□□ -0.78
DDX56-201ENST00000258772 TRAV23DV6A0A075B6W5 121 aa10.17□□□□□ -0.78
DDX56-201ENST00000258772 LOC110117498A0A087WWA1 95 aa10.17□□□□□ -0.78
DDX56-201ENST00000258772 SERP2Q8N6R1 65 aa10.17□□□□□ -0.78
DDX56-201ENST00000258772 KPRPQ5T749 579 aaPredicted RBP10.17□□□□□ -0.78
DDX56-201ENST00000258772 DIRC1Q969H9 104 aa10.16□□□□□ -0.78
DDX56-201ENST00000258772 H3BNG1 76 aa10.16□□□□□ -0.78
DDX56-201ENST00000258772 HIGD2BQ4VC39 106 aa10.16□□□□□ -0.78
DDX56-201ENST00000258772 KRTAP26-1Q6PEX3 210 aa10.15□□□□□ -0.78
DDX56-201ENST00000258772 CAMK2N2Q96S95 79 aa10.15□□□□□ -0.78
DDX56-201ENST00000258772 H3BQ85 93 aa10.15□□□□□ -0.79
DDX56-201ENST00000258772 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.79
DDX56-201ENST00000258772 FAM19A1Q7Z5A9 133 aa10.15□□□□□ -0.79
DDX56-201ENST00000258772 RETNQ9HD89 108 aa10.14□□□□□ -0.79
DDX56-201ENST00000258772 DSCR8Q96T75 97 aa10.13□□□□□ -0.79
DDX56-201ENST00000258772 M0R2N4 97 aa10.13□□□□□ -0.79
DDX56-201ENST00000258772 VPREB1P12018 145 aa10.12□□□□□ -0.79
DDX56-201ENST00000258772 EGFEM1PQ0D2K5 195 aa10.12□□□□□ -0.79
DDX56-201ENST00000258772 Q6ZTC4 211 aa10.12□□□□□ -0.79
DDX56-201ENST00000258772 UPK3BQ9BT76 320 aa10.12□□□□□ -0.79
DDX56-201ENST00000258772 COX7BP24311 80 aa10.12□□□□□ -0.79
DDX56-201ENST00000258772 Q6ZRU5 148 aa10.12□□□□□ -0.79
DDX56-201ENST00000258772 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
DDX56-201ENST00000258772 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.11□□□□□ -0.79
DDX56-201ENST00000258772 PDE6GP18545 87 aa10.11□□□□□ -0.79
DDX56-201ENST00000258772 ELOF1P60002 83 aaKnown RBP10.11□□□□□ -0.79
DDX56-201ENST00000258772 C15orf56Q8N910 161 aa10.11□□□□□ -0.79
DDX56-201ENST00000258772 TRBV7-6A0A0J9YX20 115 aa10.1□□□□□ -0.79
DDX56-201ENST00000258772 KRTAP10-11P60412 298 aa10.1□□□□□ -0.79
DDX56-201ENST00000258772 ESRGQ1W209 222 aa10.1□□□□□ -0.79
DDX56-201ENST00000258772 M0R378 163 aa10.09□□□□□ -0.79
DDX56-201ENST00000258772 NDUFC2-KCTD14E9PQ53 114 aa10.08□□□□□ -0.8
DDX56-201ENST00000258772 GHRHP01286 108 aa10.08□□□□□ -0.8
DDX56-201ENST00000258772 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
DDX56-201ENST00000258772 Q6ZVQ6 151 aa10.07□□□□□ -0.8
DDX56-201ENST00000258772 LINC01547P58512 204 aaPredicted RBP10.07□□□□□ -0.8
DDX56-201ENST00000258772 PKD1L1Q8TDX9 2849 aa10.06□□□□□ -0.8
DDX56-201ENST00000258772 TRBV7-4A0A0J9YYF1 115 aa10.06□□□□□ -0.8
DDX56-201ENST00000258772 HAMPP81172 84 aa10.05□□□□□ -0.8
DDX56-201ENST00000258772 Q6ZRP5 223 aa10.04□□□□□ -0.8
DDX56-201ENST00000258772 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
DDX56-201ENST00000258772 LINC00528Q8N1L1 170 aa10.04□□□□□ -0.8
DDX56-201ENST00000258772 IGKV2D-24A0A075B6R9 120 aa10.03□□□□□ -0.8
DDX56-201ENST00000258772 TMEM258P61165 79 aa10.02□□□□□ -0.8
DDX56-201ENST00000258772 ANK2Q01484 3957 aa10.02□□□□□ -0.81
DDX56-201ENST00000258772 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
DDX56-201ENST00000258772 LOC107984640A0A0U1RRK4 108 aa10.01□□□□□ -0.81
DDX56-201ENST00000258772 CXCL6P80162 114 aa10.01□□□□□ -0.81
DDX56-201ENST00000258772 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
DDX56-201ENST00000258772 J3KT08 172 aa10□□□□□ -0.81
DDX56-201ENST00000258772 TENM3Q9P273 2699 aa10□□□□□ -0.81
DDX56-201ENST00000258772 RPS28P62857 69 aaKnown RBP9.99□□□□□ -0.81
DDX56-201ENST00000258772 BCE1O60756 84 aa9.99□□□□□ -0.81
DDX56-201ENST00000258772 C11orf45Q8TAV5 145 aa9.99□□□□□ -0.81
DDX56-201ENST00000258772 DPH3Q96FX2 82 aa9.96□□□□□ -0.81
DDX56-201ENST00000258772 KCNQ1DNQ9H478 68 aa9.96□□□□□ -0.81
DDX56-201ENST00000258772 TRAV10A0A0B4J240 114 aa9.95□□□□□ -0.82
DDX56-201ENST00000258772 C20orf197Q8N268 126 aa9.95□□□□□ -0.82
DDX56-201ENST00000258772 TRAV7A0A075B6U4 112 aa9.95□□□□□ -0.82
DDX56-201ENST00000258772 DNAH10OSP0CZ25 163 aa9.95□□□□□ -0.82
DDX56-201ENST00000258772 SERTAD4-AS1Q5TG53 156 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms