RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Urm1Q9D2P4 101 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 2900055J20RikQ9D6G3 140 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Golt1aQ9DCQ3 133 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Clec6aQ9JKF4 209 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 GlrxQ9QUH0 107 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ighv1-55A0A075B5W6 117 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cldn34dA2AGU5 210 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm26727M0QWT1 121 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rpl8P62918 257 aaKnown RBP6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cnn1Q08091 297 aaKnown RBP6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ercc8Q8CFD5 397 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rnf183Q8QZS5 190 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr113Q8VEU4 312 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rpp14Q9CQH8 122 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gins3Q9CY94 216 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Susd2Q9DBX3 820 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Plekha2Q9ERS5 425 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Timm10bQ9WV96 100 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Trbv31A0A075B5J5 111 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm4744D3Z3S5 154 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 P01796 113 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 P01797 113 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 P01799 113 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 P01801 115 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 P01802 115 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Pet117P0DJF2 80 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 HrasQ61411 189 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Vma21Q78T54 101 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr745Q7TRL9 328 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ceacam11Q9D0Z8 303 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Tmem239Q9DA47 151 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Dmbt1Q60997 2085 aa6.54□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ighv3-1A0A075B5S6 116 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ighv1-26A0A075B5V0 117 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr1293-psA0A1L1SVB5 326 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Nat8f4G5E8L3 226 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Vmn1r194J3JS27 296 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm5150Q1AN92 299 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rep15Q9D7T1 230 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ighv7-2A0A0A6YX91 119 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm45692D3Z0A0 150 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Dnajc30P59041 219 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Znf329Q6GQR8 522 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Fam110dQ80X91 271 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Il22ra1Q80XZ4 581 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Hnrnpa3Q8BG05 379 aaKnown RBP6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Vmn1r73Q8R293 303 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cd99Q8VCN6 175 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr476Q8VGI4 310 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rpl11Q9CXW4 178 aaKnown RBP6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Fbxl17Q9QZN1 701 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Arpc1aQ9R0Q6 370 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm21778A0A087WNP8 232 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr177E9Q7W1 309 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Znf431E9QAG8 526 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Lgals9O08573 353 aaKnown RBP6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Hmgb3O54879 200 aaKnown RBP6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Tmem256Q5F285 113 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr148Q60887 310 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr150Q60895 312 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 St8sia3Q64689 380 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr1373Q7TQT6 311 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm10309Q8C648 119 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Q8CF25 301 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr135Q8VEY4 312 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 4933414I15RikQ9D4D5 133 aa6.53□□□□□ -1.36
Trim39-205ENSMUST00000173369 Trbv15A0A0A6YYE3 115 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ighv1-69A0A0G2JFS5 117 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Sprr3O09116 238 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ins2P01326 110 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ccl6P27784 116 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 VhlP40338 181 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Wfdc17Q5SSJ1 76 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Commd9Q8K2Q0 198 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr495Q8VF12 330 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 EpcamQ99JW5 315 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Hdhd3Q9CYW4 251 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tmem170aQ9D342 144 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Sfrp4Q9Z1N6 351 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm12728V9GX31 77 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm9376G3UW68 176 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Fut1O09160 376 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 P01820 115 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Fa2hQ5MPP0 372 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Prr9Q8BV84 116 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 RpeQ8VEE0 228 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr211Q8VGH2 309 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Epdr1Q99M71 224 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Mrpl16Q99N93 251 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Hspb8Q9JK92 196 aa6.52□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ighv1-22A0A075B5U7 117 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm10037E9PX85 104 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Zfp708F8VPP0 541 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr624F8VQI7 308 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 SmcpP15265 143 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Rnd3P61588 244 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Lsm5P62322 91 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Fam3dP97805 223 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr263Q7TQT8 317 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Odf3l1Q810P2 275 aa6.51□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms