RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ZNF22P17026 224 aaPredicted RBP9.19□□□□□ -0.94
HLA-C-210ENST00000640219 AMELXQ99217 191 aa9.19□□□□□ -0.94
HLA-C-210ENST00000640219 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.18□□□□□ -0.94
HLA-C-210ENST00000640219 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
HLA-C-210ENST00000640219 APOMO95445 188 aa9.18□□□□□ -0.94
HLA-C-210ENST00000640219 OPRPNQ99935 248 aaPredicted RBP9.18□□□□□ -0.94
HLA-C-210ENST00000640219 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
HLA-C-210ENST00000640219 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 LOC107984156A0A0G2JMH3 177 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 MRPS36P82909 103 aaKnown RBP9.17□□□□□ -0.94
HLA-C-210ENST00000640219 DGAT2L7PQ6IED9 249 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 ARL17AQ8IVW1 177 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 Q8N3U1 123 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 NTN5Q8WTR8 489 aaPredicted RBP9.17□□□□□ -0.94
HLA-C-210ENST00000640219 PRO1854Q9UHT4 67 aa9.17□□□□□ -0.94
HLA-C-210ENST00000640219 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
HLA-C-210ENST00000640219 GAGE12JA6NER3 117 aa9.16□□□□□ -0.94
HLA-C-210ENST00000640219 H3BMG7 143 aa9.16□□□□□ -0.94
HLA-C-210ENST00000640219 SCGB1C2P0DMR2 95 aa9.16□□□□□ -0.94
HLA-C-210ENST00000640219 PSMB2P49721 201 aa9.16□□□□□ -0.94
HLA-C-210ENST00000640219 GAGE4Q13068 117 aa9.16□□□□□ -0.94
HLA-C-210ENST00000640219 GAGE5Q13069 117 aa9.16□□□□□ -0.94
HLA-C-210ENST00000640219 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
HLA-C-210ENST00000640219 TSPEAR-AS2P59090 65 aa9.15□□□□□ -0.94
HLA-C-210ENST00000640219 IGHV1-58A0A0C4DH39 117 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 CIDEAO60543 219 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 TSPAN13O95857 204 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 RPL36AP83881 106 aaKnown RBP9.14□□□□□ -0.95
HLA-C-210ENST00000640219 WFDC2Q14508 124 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 RPL36ALQ969Q0 106 aaKnown RBP9.14□□□□□ -0.95
HLA-C-210ENST00000640219 CHCHD7Q9BUK0 85 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
HLA-C-210ENST00000640219 TRBV6-4A0A1B0GX49 114 aa9.13□□□□□ -0.95
HLA-C-210ENST00000640219 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
HLA-C-210ENST00000640219 CFC1P0CG37 223 aa9.13□□□□□ -0.95
HLA-C-210ENST00000640219 IGHV3-30-3P0DP02 117 aa9.13□□□□□ -0.95
HLA-C-210ENST00000640219 C10orf126Q8N4M7 172 aa9.13□□□□□ -0.95
HLA-C-210ENST00000640219 IGHV3-64A0A075B6Q5 118 aa9.12□□□□□ -0.95
HLA-C-210ENST00000640219 A0A0B4J2C4 111 aa9.12□□□□□ -0.95
HLA-C-210ENST00000640219 A0A0J9YXY3 114 aa9.12□□□□□ -0.95
HLA-C-210ENST00000640219 IGHV3-33P01772 117 aa9.12□□□□□ -0.95
HLA-C-210ENST00000640219 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
HLA-C-210ENST00000640219 TIRAPP58753 221 aa9.12□□□□□ -0.95
HLA-C-210ENST00000640219 DAZ4Q86SG3 579 aaKnown RBP9.12□□□□□ -0.95
HLA-C-210ENST00000640219 ATP6V0E2Q8NHE4 81 aa9.12□□□□□ -0.95
HLA-C-210ENST00000640219 DAZ3Q9NR90 486 aaKnown RBP9.12□□□□□ -0.95
HLA-C-210ENST00000640219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.11□□□□□ -0.95
HLA-C-210ENST00000640219 IGKV2-29A2NJV5 120 aaPredicted RBP9.11□□□□□ -0.95
HLA-C-210ENST00000640219 LRCOL1A6NCL2 159 aa9.11□□□□□ -0.95
HLA-C-210ENST00000640219 UBE2D3P61077 147 aa9.11□□□□□ -0.95
HLA-C-210ENST00000640219 UBE2D2P62837 147 aa9.11□□□□□ -0.95
HLA-C-210ENST00000640219 CIRBPQ14011 172 aaKnown RBP9.11□□□□□ -0.95
HLA-C-210ENST00000640219 MUSTN1Q8IVN3 82 aa9.11□□□□□ -0.95
HLA-C-210ENST00000640219 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
HLA-C-210ENST00000640219 NDUFA12Q9UI09 145 aa9.11□□□□□ -0.95
HLA-C-210ENST00000640219 DNAH8Q96JB1 4490 aa9.1□□□□□ -0.95
HLA-C-210ENST00000640219 A4D1N5 150 aa9.1□□□□□ -0.95
HLA-C-210ENST00000640219 PSCAO43653 123 aa9.1□□□□□ -0.95
HLA-C-210ENST00000640219 C21orf62-AS1Q17RA5 79 aa9.1□□□□□ -0.95
HLA-C-210ENST00000640219 Q6ZSA8 131 aa9.1□□□□□ -0.95
HLA-C-210ENST00000640219 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 TIMM17BO60830 172 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 IFITM1P13164 125 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 KRTAP10-4P60372 401 aaPredicted RBP9.09□□□□□ -0.95
HLA-C-210ENST00000640219 HERVK_113P63121 156 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 Q1RN00 199 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 Q8N814 137 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 TMEM101Q96IK0 257 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 SPANXDQ9BXN6 97 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 SPANXCQ9NY87 97 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 PRO0461Q9UI25 63 aa9.09□□□□□ -0.95
HLA-C-210ENST00000640219 PRSS2P07478 247 aa9.08□□□□□ -0.96
HLA-C-210ENST00000640219 ETDBQ3ZM63 59 aa9.08□□□□□ -0.96
HLA-C-210ENST00000640219 Q6ZUT4 128 aa9.08□□□□□ -0.96
HLA-C-210ENST00000640219 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
HLA-C-210ENST00000640219 GTSF1LQ9H1H1 148 aa9.08□□□□□ -0.96
HLA-C-210ENST00000640219 Q9HAA7 133 aa9.08□□□□□ -0.96
HLA-C-210ENST00000640219 UBE2L6O14933 153 aa9.07□□□□□ -0.96
HLA-C-210ENST00000640219 SPINK8P0C7L1 97 aa9.07□□□□□ -0.96
HLA-C-210ENST00000640219 LELP1Q5T871 98 aa9.07□□□□□ -0.96
HLA-C-210ENST00000640219 SH2D6Q7Z4S9 175 aa9.07□□□□□ -0.96
HLA-C-210ENST00000640219 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
HLA-C-210ENST00000640219 COX6CP09669 75 aa9.06□□□□□ -0.96
HLA-C-210ENST00000640219 LRP2P98164 4655 aa9.06□□□□□ -0.96
HLA-C-210ENST00000640219 MIAQ16674 131 aa9.06□□□□□ -0.96
HLA-C-210ENST00000640219 RNASE13Q5GAN3 156 aaKnown RBP9.06□□□□□ -0.96
HLA-C-210ENST00000640219 IGLV5-45A0A087WSX0 123 aa9.05□□□□□ -0.96
HLA-C-210ENST00000640219 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
HLA-C-210ENST00000640219 H7C423 109 aa9.05□□□□□ -0.96
HLA-C-210ENST00000640219 NDUFA1O15239 70 aa9.05□□□□□ -0.96
HLA-C-210ENST00000640219 TCL1BO95988 128 aa9.05□□□□□ -0.96
HLA-C-210ENST00000640219 SCGB1A1P11684 91 aa9.05□□□□□ -0.96
HLA-C-210ENST00000640219 ATXN8Q156A1 80 aa9.05□□□□□ -0.96
HLA-C-210ENST00000640219 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms