RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	SSBP3-AS1	Q7Z2R9	100 aa		11.85	□□□□□ -0.51
CACNA1A-238	ENST00000637276	TRBV6-4	A0A1B0GX49	114 aa		11.85	□□□□□ -0.51
CACNA1A-238	ENST00000637276	KRTAP10-9	P60411	292 aa		11.85	□□□□□ -0.51
CACNA1A-238	ENST00000637276	SPAG11A	Q6PDA7	123 aa		11.85	□□□□□ -0.51
CACNA1A-238	ENST00000637276		H7C423	109 aa		11.84	□□□□□ -0.51
CACNA1A-238	ENST00000637276		Q6ZPA2	131 aa		11.84	□□□□□ -0.51
CACNA1A-238	ENST00000637276	TRBV7-7	A0A0K0K1E9	115 aa		11.84	□□□□□ -0.51
CACNA1A-238	ENST00000637276	ZFYVE26	Q68DK2	2539 aa		11.83	□□□□□ -0.51
CACNA1A-238	ENST00000637276	IGLV4-60	A0A075B6I1	120 aa		11.83	□□□□□ -0.52
CACNA1A-238	ENST00000637276		A0A1B0GU69	56 aa		11.82	□□□□□ -0.52
CACNA1A-238	ENST00000637276	MDFI	Q99750	246 aa		11.82	□□□□□ -0.52
CACNA1A-238	ENST00000637276	C11orf1	Q9H5F2	150 aa		11.8	□□□□□ -0.52
CACNA1A-238	ENST00000637276	LINC01554	Q52M75	96 aa		11.8	□□□□□ -0.52
CACNA1A-238	ENST00000637276	FAM229A	H3BQW9	127 aa		11.79	□□□□□ -0.52
CACNA1A-238	ENST00000637276	ADAMTS20	P59510	1910 aa		11.78	□□□□□ -0.52
CACNA1A-238	ENST00000637276	MRGPRG-AS1	Q2M3A8	158 aa		11.78	□□□□□ -0.52
CACNA1A-238	ENST00000637276	NRAC	Q8N912	160 aa		11.78	□□□□□ -0.52
CACNA1A-238	ENST00000637276	ODF3	Q96PU9	254 aa		11.78	□□□□□ -0.52
CACNA1A-238	ENST00000637276	C11orf21	Q9P2W6	132 aa		11.78	□□□□□ -0.52
CACNA1A-238	ENST00000637276	ZNF580	Q9UK33	172 aa		11.77	□□□□□ -0.53
CACNA1A-238	ENST00000637276	TLN1	Q9Y490	2541 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1A-238	ENST00000637276	ATP5EP2	Q5VTU8	51 aa		11.77	□□□□□ -0.53
CACNA1A-238	ENST00000637276	ZNF295-AS1	Q8N0V1	137 aa		11.77	□□□□□ -0.53
CACNA1A-238	ENST00000637276	JMJD1C	Q15652	2540 aa		11.76	□□□□□ -0.53
CACNA1A-238	ENST00000637276	TLN2	Q9Y4G6	2542 aa		11.76	□□□□□ -0.53
CACNA1A-238	ENST00000637276	NDUFC1	O43677	76 aa		11.76	□□□□□ -0.53
CACNA1A-238	ENST00000637276	MRPS36	P82909	103 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1A-238	ENST00000637276	LRRC75A-AS1	Q8N1F1	130 aa		11.76	□□□□□ -0.53
CACNA1A-238	ENST00000637276	C16orf90	A8MZG2	172 aa		11.76	□□□□□ -0.53
CACNA1A-238	ENST00000637276		Q96NJ1	140 aa		11.76	□□□□□ -0.53
CACNA1A-238	ENST00000637276		Q8N814	137 aa		11.75	□□□□□ -0.53
CACNA1A-238	ENST00000637276	C9orf92	A6NGG3	77 aa		11.75	□□□□□ -0.53
CACNA1A-238	ENST00000637276	NTM-AS1	Q6ZSK4	140 aa		11.75	□□□□□ -0.53
CACNA1A-238	ENST00000637276	CDSN	Q15517	529 aa		11.75	□□□□□ -0.53
CACNA1A-238	ENST00000637276	FBXL19-AS1	Q494R0	122 aa		11.74	□□□□□ -0.53
CACNA1A-238	ENST00000637276	C1orf64	Q8NEQ6	169 aa		11.74	□□□□□ -0.53
CACNA1A-238	ENST00000637276	FSTL3	O95633	263 aa		11.74	□□□□□ -0.53
CACNA1A-238	ENST00000637276	RPL37A	P61513	92 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1A-238	ENST00000637276	C2orf91	Q6ZV80	131 aa		11.74	□□□□□ -0.53
CACNA1A-238	ENST00000637276	F8	P00451	2351 aa		11.74	□□□□□ -0.53
CACNA1A-238	ENST00000637276	ATP5E	P56381	51 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNA1A-238	ENST00000637276	COX7C	P15954	63 aa		11.72	□□□□□ -0.53
CACNA1A-238	ENST00000637276	SMCR5	Q8TEV8	140 aa		11.72	□□□□□ -0.53
CACNA1A-238	ENST00000637276	LIMD2	Q9BT23	127 aa		11.72	□□□□□ -0.53
CACNA1A-238	ENST00000637276	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNA1A-238	ENST00000637276	SMIM29	Q86T20	159 aa		11.71	□□□□□ -0.53
CACNA1A-238	ENST00000637276	FN1	P02751	2386 aa	Known RBP	11.71	□□□□□ -0.53
CACNA1A-238	ENST00000637276	NAV2	Q8IVL1	2488 aa		11.71	□□□□□ -0.53
CACNA1A-238	ENST00000637276	MYO9A	B2RTY4	2548 aa		11.71	□□□□□ -0.54
CACNA1A-238	ENST00000637276		P0C879	139 aa		11.7	□□□□□ -0.54
CACNA1A-238	ENST00000637276	CDC42SE2	Q9NRR3	84 aa		11.7	□□□□□ -0.54
CACNA1A-238	ENST00000637276		Q8N3U1	123 aa		11.7	□□□□□ -0.54
CACNA1A-238	ENST00000637276	PTPRS	Q13332	1948 aa		11.69	□□□□□ -0.54
CACNA1A-238	ENST00000637276	AVP	P01185	164 aa		11.69	□□□□□ -0.54
CACNA1A-238	ENST00000637276	TYMSOS	Q8TAI1	123 aa		11.69	□□□□□ -0.54
CACNA1A-238	ENST00000637276	PHF5A	Q7RTV0	110 aa	Known RBP	11.69	□□□□□ -0.54
CACNA1A-238	ENST00000637276		Q6ZRU5	148 aa		11.69	□□□□□ -0.54
CACNA1A-238	ENST00000637276	TMEM254	Q8TBM7	123 aa		11.69	□□□□□ -0.54
CACNA1A-238	ENST00000637276	LRRK2	Q5S007	2527 aa		11.68	□□□□□ -0.54
CACNA1A-238	ENST00000637276	COX17	Q14061	63 aa		11.67	□□□□□ -0.54
CACNA1A-238	ENST00000637276	PSMG3-AS1	Q96PY0	264 aa		11.67	□□□□□ -0.54
CACNA1A-238	ENST00000637276	COL4A4	P53420	1690 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNA1A-238	ENST00000637276	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNA1A-238	ENST00000637276		Q6ZSN1	163 aa		11.65	□□□□□ -0.54
CACNA1A-238	ENST00000637276		Q8IZM0	81 aa		11.65	□□□□□ -0.54
CACNA1A-238	ENST00000637276	C11orf71	Q6IPW1	123 aa		11.65	□□□□□ -0.54
CACNA1A-238	ENST00000637276	C22orf24	Q9Y442	160 aa		11.65	□□□□□ -0.54
CACNA1A-238	ENST00000637276	ATP11AUN	Q6ZP68	121 aa		11.64	□□□□□ -0.55
CACNA1A-238	ENST00000637276	TRAV7	A0A075B6U4	112 aa		11.64	□□□□□ -0.55
CACNA1A-238	ENST00000637276	KIAA0087	Q14695	138 aa		11.63	□□□□□ -0.55
CACNA1A-238	ENST00000637276	CRIP3	Q6Q6R5	217 aa		11.63	□□□□□ -0.55
CACNA1A-238	ENST00000637276	IGF2R	P11717	2491 aa		11.63	□□□□□ -0.55
CACNA1A-238	ENST00000637276	SMIM26	A0A096LP01	95 aa		11.63	□□□□□ -0.55
CACNA1A-238	ENST00000637276	C6orf48	Q9UBA6	75 aa		11.62	□□□□□ -0.55
CACNA1A-238	ENST00000637276	PTPRB	P23467	1997 aa		11.62	□□□□□ -0.55
CACNA1A-238	ENST00000637276	IGLV6-57	P01721	117 aa		11.62	□□□□□ -0.55
CACNA1A-238	ENST00000637276	TSPEAR-AS2	P59090	65 aa		11.62	□□□□□ -0.55
CACNA1A-238	ENST00000637276	SMR3B	P02814	79 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA1A-238	ENST00000637276	LYPD5	Q6UWN5	251 aa		11.61	□□□□□ -0.55
CACNA1A-238	ENST00000637276		A0A0D9SG42	100 aa		11.61	□□□□□ -0.55
CACNA1A-238	ENST00000637276	ADAMTSL4-AS1	Q5T5F5	129 aa		11.6	□□□□□ -0.55
CACNA1A-238	ENST00000637276	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1A-238	ENST00000637276	LINC00313	P59037	77 aa		11.6	□□□□□ -0.55
CACNA1A-238	ENST00000637276		Q6JHZ5	121 aa		11.59	□□□□□ -0.55
CACNA1A-238	ENST00000637276	LINC00574	Q9H8X3	128 aa		11.58	□□□□□ -0.56
CACNA1A-238	ENST00000637276	CENPF	P49454	3210 aa		11.58	□□□□□ -0.56
CACNA1A-238	ENST00000637276	CPAMD8	Q8IZJ3	1885 aa		11.56	□□□□□ -0.56
CACNA1A-238	ENST00000637276	NCOR2	Q9Y618	2525 aa		11.56	□□□□□ -0.56
CACNA1A-238	ENST00000637276	KLLN	B2CW77	178 aa		11.56	□□□□□ -0.56
CACNA1A-238	ENST00000637276	CHCHD7	Q9BUK0	85 aa		11.56	□□□□□ -0.56
CACNA1A-238	ENST00000637276	ABCA12	Q86UK0	2595 aa		11.55	□□□□□ -0.56
CACNA1A-238	ENST00000637276	EGFEM1P	Q0D2K5	195 aa		11.55	□□□□□ -0.56
CACNA1A-238	ENST00000637276	POLR2K	P53803	58 aa	Known RBP	11.55	□□□□□ -0.56
CACNA1A-238	ENST00000637276	SMIM1	B2RUZ4	78 aa		11.54	□□□□□ -0.56
CACNA1A-238	ENST00000637276	ODF3L2	Q3SX64	289 aa		11.54	□□□□□ -0.56
CACNA1A-238	ENST00000637276	RTL8C	O15255	209 aa		11.53	□□□□□ -0.56
CACNA1A-238	ENST00000637276	FAM19A4	Q96LR4	140 aa		11.53	□□□□□ -0.56
CACNA1A-238	ENST00000637276	IGIP	A6NJ69	53 aa		11.52	□□□□□ -0.56
CACNA1A-238	ENST00000637276	C9orf129	Q5T035	196 aa	Known RBP	11.52	□□□□□ -0.57
CACNA1A-238	ENST00000637276	IGLV1-40	P01703	118 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms