RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 A0A0J9YX75 114 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 CLPSL1A2RUU4 121 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 F8VRH5 84 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 M0R3E3 92 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 DEFB116Q30KQ4 102 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 C1orf137Q5JT78 98 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 KPRPQ5T749 579 aaPredicted RBP1.7□□□□□ -2.14
CNOT1-223ENST00000628857 ENHOQ6UWT2 76 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 DOCK10Q96BY6 2186 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 LINC00846Q9NV44 126 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 MRPL36Q9P0J6 103 aaKnown RBP1.7□□□□□ -2.14
CNOT1-223ENST00000628857 R4GMQ9 66 aa1.7□□□□□ -2.14
CNOT1-223ENST00000628857 A0A1B0GU33 70 aa1.69□□□□□ -2.14
CNOT1-223ENST00000628857 NUPR2A6NF83 97 aa1.69□□□□□ -2.14
CNOT1-223ENST00000628857 IGKV1-17P01599 117 aa1.69□□□□□ -2.14
CNOT1-223ENST00000628857 WFDC9Q8NEX5 89 aa1.69□□□□□ -2.14
CNOT1-223ENST00000628857 LINC01558Q9Y6Z2 57 aa1.69□□□□□ -2.14
CNOT1-223ENST00000628857 CEP192Q8TEP8 1941 aa1.69□□□□□ -2.14
CNOT1-223ENST00000628857 COL27A1Q8IZC6 1860 aaPredicted RBP1.69□□□□□ -2.14
CNOT1-223ENST00000628857 TRAV21A0A0B4J279 112 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 LINC01546A6NGU7 62 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 J3QRE1 110 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 M0R1W7 72 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 FXYD3Q14802 87 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 KRTAP25-1Q3LHN0 102 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 KRTAP26-1Q6PEX3 210 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 COX7B2Q8TF08 81 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 LINC00208Q96KT6 92 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 OBSCN-AS1Q96MR7 158 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 TMEM14CQ9P0S9 112 aa1.68□□□□□ -2.14
CNOT1-223ENST00000628857 GOLGA4Q13439 2230 aaKnown RBP1.67□□□□□ -2.14
CNOT1-223ENST00000628857 IGKV3-7A0A075B6H7 116 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 TRAV40A0A0B4J280 105 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 H0Y9P7 68 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 M0R135 149 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 UQCR11O14957 56 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 MGPP08493 103 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 IGFL1Q6UW32 110 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 ST20-AS1Q8NBB2 130 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 TTTY12Q9BZ98 90 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 TMEM167BQ9NRX6 74 aa1.67□□□□□ -2.14
CNOT1-223ENST00000628857 PRRC2BQ5JSZ5 2229 aaKnown RBP1.67□□□□□ -2.14
CNOT1-223ENST00000628857 TRBV6-1A0A0K0K1D8 114 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 JMJD7-PLA2G4BH0Y9G9 81 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 I3L3M4 83 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 ARL14EPLP0DKL9 152 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 COX6B1P14854 86 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 CCL3L1P16619 93 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 CCL18P55774 89 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 PDE6HQ13956 83 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 Q5W150 140 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 C4orf3Q8WVX3 66 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 WFDC10AQ9H1F0 79 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 RP1P56715 2156 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 CACNA1DQ01668 2161 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 SPAG17Q6Q759 2223 aa1.66□□□□□ -2.14
CNOT1-223ENST00000628857 LCE6AA0A183 80 aa1.65□□□□□ -2.15
CNOT1-223ENST00000628857 IGIPA6NJ69 53 aa1.65□□□□□ -2.15
CNOT1-223ENST00000628857 PIN1P1O15428 100 aa1.65□□□□□ -2.15
CNOT1-223ENST00000628857 NDUFA3O95167 84 aa1.65□□□□□ -2.15
CNOT1-223ENST00000628857 CNBPP62633 177 aaKnown RBP1.65□□□□□ -2.15
CNOT1-223ENST00000628857 HIGD2AQ9BW72 106 aa1.65□□□□□ -2.15
CNOT1-223ENST00000628857 PLAC8Q9NZF1 115 aa1.65□□□□□ -2.15
CNOT1-223ENST00000628857 PDE6GP18545 87 aa1.64□□□□□ -2.15
CNOT1-223ENST00000628857 ZNF137PP52743 207 aa1.64□□□□□ -2.15
CNOT1-223ENST00000628857 C10orf113Q5VZT2 155 aa1.64□□□□□ -2.15
CNOT1-223ENST00000628857 SPINT4Q6UDR6 99 aa1.64□□□□□ -2.15
CNOT1-223ENST00000628857 C9orf163Q8N9P6 203 aa1.64□□□□□ -2.15
CNOT1-223ENST00000628857 GAFA1Q96PS6 74 aa1.64□□□□□ -2.15
CNOT1-223ENST00000628857 CUL9Q8IWT3 2517 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 IGKV3OR2-268A0A0C4DH90 116 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 NDUFA4O00483 81 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 CTSGP08311 255 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 RNASE3P12724 160 aaKnown RBP1.63□□□□□ -2.15
CNOT1-223ENST00000628857 SPINK7P58062 85 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 DEFB112Q30KQ8 113 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 LINC00322Q6ZN03 302 aaPredicted RBP1.63□□□□□ -2.15
CNOT1-223ENST00000628857 ZCCHC13Q8WW36 166 aaKnown RBP1.63□□□□□ -2.15
CNOT1-223ENST00000628857 PATE1Q8WXA2 126 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 FREM1Q5H8C1 2179 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 PRR14LQ5THK1 2151 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 ZFHX3Q15911 3703 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 ABCA4P78363 2273 aa1.63□□□□□ -2.15
CNOT1-223ENST00000628857 UNC13CQ8NB66 2214 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 TNRC6CQ9HCJ0 1690 aaKnown RBP1.62□□□□□ -2.15
CNOT1-223ENST00000628857 IGLV3-19P01714 112 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 IGLV3-1P01715 115 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 IL9P15248 144 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 RPL38P63173 70 aaKnown RBP1.62□□□□□ -2.15
CNOT1-223ENST00000628857 HAMPP81172 84 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 COX17Q14061 63 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 LY6EQ16553 131 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 HCP5Q6MZN7 132 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 KLK9Q9UKQ9 250 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 ALPK2Q86TB3 2170 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 SDK1Q7Z5N4 2213 aa1.62□□□□□ -2.15
CNOT1-223ENST00000628857 COL4A5P29400 1685 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 TNCP24821 2201 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 TRGV4A0A0C4DH28 118 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 TRBV6-4A0A1B0GX49 114 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms