RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 SMCR5Q8TEV8 140 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 BAHCC1Q9P281 2608 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 STAB2Q8WWQ8 2551 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 DNAH5Q8TE73 4624 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 STARD9Q9P2P6 4700 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 FRAS1Q86XX4 4008 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 TRBV7-7A0A0K0K1E9 115 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 A0A0U1RRA0 63 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 LINC00959A0A1B0GUT2 108 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 NANOS2P60321 138 aaKnown RBP2.23□□□□□ -2.05
U1.39-201ENST00000621562 SS18Q15532 418 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 LINC01561Q8N1V8 128 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 MIR7-3HGQ8N6C7 128 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 C15orf53Q8NAA6 179 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 LINC00167Q96N53 147 aa2.23□□□□□ -2.05
U1.39-201ENST00000621562 COL6A5A8TX70 2615 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 CSMD3Q7Z407 3707 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 TRGV2A0A075B6R0 118 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 TRAV26-1A0A087WT03 109 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 A0A087WYN8 130 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 TRGV4A0A0C4DH28 118 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 A0A1B0GUV1 79 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 IBA57-AS1B1ANH7 110 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 UBE2L6O14933 153 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 CRPP02741 224 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 PF4P02776 101 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 COX6CP09669 75 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 GYPEP15421 78 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 NDUFV3P56181 108 aaKnown RBP2.22□□□□□ -2.05
U1.39-201ENST00000621562 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
U1.39-201ENST00000621562 KIAA0087Q14695 138 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 TTC32Q5I0X7 151 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 MEIG1Q5JSS6 88 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 C9orf129Q5T035 196 aaKnown RBP2.22□□□□□ -2.05
U1.39-201ENST00000621562 Q8IZM0 81 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 Q8N3U1 123 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 Q8NDZ9 215 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 SMIM11BQ8TCY0 68 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 COPS9Q8WXC6 57 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 OBSCN-AS1Q96MR7 158 aa2.22□□□□□ -2.05
U1.39-201ENST00000621562 ALMS1Q8TCU4 4167 aa2.21□□□□□ -2.05
U1.39-201ENST00000621562 TRAV13-2A0A0B4J235 113 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 LYRM9A8MSI8 78 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 CCDC179H3BU77 68 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 SNCGO76070 127 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 COL7A1Q02388 2944 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 C5orf38Q86SI9 138 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 Q8NAQ8 132 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 SMR3AQ99954 134 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 CHCHD5Q9BSY4 110 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 SND1-IT1Q9HBX3 110 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 CELA1Q9UNI1 258 aa2.21□□□□□ -2.06
U1.39-201ENST00000621562 FBN1P35555 2871 aaKnown RBP2.21□□□□□ -2.06
U1.39-201ENST00000621562 MGAM2Q2M2H8 2515 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 IGHV4-28A0A0C4DH34 117 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 IGKV3OR2-268A0A0C4DH90 116 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 SMIM9A6NGZ8 99 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 WIPF1O43516 503 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 BAALC-AS2P0C853 105 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 DEFB130BP0DP73 79 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 DEFB130AP0DP74 79 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 MALP21145 153 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 HIST1H4AP62805 103 aaKnown RBP2.2□□□□□ -2.06
U1.39-201ENST00000621562 GAGE2BQ13066 116 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 GAGE2EQ4V326 116 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 ANAPC13Q9BS18 74 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 Q9HAA7 133 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 TOMM7Q9P0U1 55 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 GAGE2DQ9UEU5 116 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 PRO0255Q9UI72 69 aa2.2□□□□□ -2.06
U1.39-201ENST00000621562 H0YGX0 51 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 J3QKU1 62 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 NDUFC2O95298 119 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 ACYP1P07311 99 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 INAFM2P0DMQ5 153 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 XCL1P47992 114 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 LINC00158P58513 81 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 DEFB135Q30KP9 77 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 C9orf66Q5T8R8 295 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 KRTAP26-1Q6PEX3 210 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 CLPSL2Q6UWE3 100 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 CD164L2Q6UWJ8 174 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 LINC00643Q86TS7 51 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 CHCHD10Q8WYQ3 142 aaPredicted RBP2.19□□□□□ -2.06
U1.39-201ENST00000621562 IMUPQ9GZP8 106 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 C11orf68Q9H3H3 251 aaKnown RBP2.19□□□□□ -2.06
U1.39-201ENST00000621562 PRR34Q9NV39 138 aa2.19□□□□□ -2.06
U1.39-201ENST00000621562 A0A096LPF7 62 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
U1.39-201ENST00000621562 FAM236AA0A1B0GUQ0 79 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 FAM236BA0A1B0GV22 79 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 A0A1B0GX51 115 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 LECT2O14960 151 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 DEFB4AO15263 64 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 PAX4O43316 350 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 ATP5G1P05496 136 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 PFN2P35080 140 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 CXCL5P42830 114 aa2.18□□□□□ -2.06
U1.39-201ENST00000621562 C9orf116Q5BN46 136 aaPredicted RBP2.18□□□□□ -2.06
U1.39-201ENST00000621562 C10orf25Q5T742 122 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms