RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 LINC00337Q8N6G1 96 aa7.37□□□□□ -1.23
VPS11-207ENST00000620429 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
VPS11-207ENST00000620429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.37□□□□□ -1.233e-7■■■■□ 25
VPS11-207ENST00000620429 LECT2O14960 151 aa7.37□□□□□ -1.23
VPS11-207ENST00000620429 MAPK1IP1LQ8NDC0 245 aa7.37□□□□□ -1.23
VPS11-207ENST00000620429 CSPG4Q6UVK1 2322 aa7.37□□□□□ -1.23
VPS11-207ENST00000620429 TRBV7-4A0A0J9YYF1 115 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 IGHV1OR15-1A0A075B7D0 117 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 H3BUX3 64 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 MIFP14174 115 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 ESRGQ1W209 222 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.36□□□□□ -1.23
VPS11-207ENST00000620429 AKAP9Q99996 3911 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 IGKV2-28A0A075B6P5 120 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 TRAV10A0A0B4J240 114 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 H3BUA1 57 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 PAX4O43316 350 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 IGKV2D-28P01615 120 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 SPINK13Q1W4C9 94 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 SPATA3Q8NHX4 192 aa7.36□□□□□ -1.23
VPS11-207ENST00000620429 IGHV3-73A0A0B4J1V6 119 aa7.35□□□□□ -1.23
VPS11-207ENST00000620429 MSMBP08118 114 aa7.35□□□□□ -1.23
VPS11-207ENST00000620429 CHCHD7Q9BUK0 85 aa7.35□□□□□ -1.23
VPS11-207ENST00000620429 C11orf72Q8NBR9 251 aa7.35□□□□□ -1.23
VPS11-207ENST00000620429 LINC00167Q96N53 147 aa7.35□□□□□ -1.23
VPS11-207ENST00000620429 DEFB113Q30KQ7 82 aa7.34□□□□□ -1.23
VPS11-207ENST00000620429 FAM19A3Q7Z5A8 133 aa7.34□□□□□ -1.23
VPS11-207ENST00000620429 SMIM1B2RUZ4 78 aa7.33□□□□□ -1.24
VPS11-207ENST00000620429 K7EMT4 169 aa7.33□□□□□ -1.24
VPS11-207ENST00000620429 ERC2-IT1O76042 136 aa7.33□□□□□ -1.24
VPS11-207ENST00000620429 HTN1P15515 57 aa7.33□□□□□ -1.24
VPS11-207ENST00000620429 HIVEP1P15822 2718 aa7.33□□□□□ -1.24
VPS11-207ENST00000620429 PROK1P58294 105 aa7.33□□□□□ -1.24
VPS11-207ENST00000620429 COX6A2Q02221 97 aa7.33□□□□□ -1.24
VPS11-207ENST00000620429 A6NDX4 124 aa7.32□□□□□ -1.24
VPS11-207ENST00000620429 RPL36AP83881 106 aaKnown RBP7.32□□□□□ -1.24
VPS11-207ENST00000620429 RPL36ALQ969Q0 106 aaKnown RBP7.32□□□□□ -1.24
VPS11-207ENST00000620429 IGLV1-40P01703 118 aa7.32□□□□□ -1.24
VPS11-207ENST00000620429 SLPIP03973 132 aa7.32□□□□□ -1.24
VPS11-207ENST00000620429 SND1-IT1Q9HBX3 110 aa7.32□□□□□ -1.24
VPS11-207ENST00000620429 LINC01547P58512 204 aaPredicted RBP7.31□□□□□ -1.24
VPS11-207ENST00000620429 B4DSR2 109 aa7.3□□□□□ -1.24
VPS11-207ENST00000620429 LINC00242Q5T6M2 205 aa7.3□□□□□ -1.24
VPS11-207ENST00000620429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.3□□□□□ -1.24
VPS11-207ENST00000620429 TMEM256-PLSCR3K7ERE1 68 aa7.3□□□□□ -1.24
VPS11-207ENST00000620429 IGHV4-59P01825 116 aa7.3□□□□□ -1.24
VPS11-207ENST00000620429 C10orf99Q6UWK7 81 aa7.3□□□□□ -1.24
VPS11-207ENST00000620429 MXRA5Q9NR99 2828 aa7.3□□□□□ -1.24
VPS11-207ENST00000620429 IGHV3-38A0A0C4DH36 116 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 K7EQG2 157 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 CXCL6P80162 114 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 DYNLRB2Q8TF09 96 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 TM2D3Q9BRN9 247 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 LINC00467Q9BRT7 94 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 Q9UF83 564 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 IGHV3OR16-12A0A075B7B8 117 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 Q1T7F1 81 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 DEFB112Q30KQ8 113 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 A0A096LNT2 108 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 DAD1P61803 113 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 Q6ZTC4 211 aa7.29□□□□□ -1.24
VPS11-207ENST00000620429 MRPL55Q7Z7F7 128 aaKnown RBP7.28□□□□□ -1.24
VPS11-207ENST00000620429 C6orf223Q8N319 242 aa7.28□□□□□ -1.24
VPS11-207ENST00000620429 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
VPS11-207ENST00000620429 PRM2P04554 102 aa7.27□□□□□ -1.25
VPS11-207ENST00000620429 LY6G6DO95868 133 aa7.27□□□□□ -1.25
VPS11-207ENST00000620429 NREPQ16612 68 aa7.27□□□□□ -1.25
VPS11-207ENST00000620429 Q6ZSN1 163 aa7.27□□□□□ -1.25
VPS11-207ENST00000620429 Q6ZTI0 123 aa7.27□□□□□ -1.25
VPS11-207ENST00000620429 Q8N3U1 123 aa7.27□□□□□ -1.25
VPS11-207ENST00000620429 C11orf68Q9H3H3 251 aaKnown RBP7.26□□□□□ -1.25
VPS11-207ENST00000620429 FUSP35637 526 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS11-207ENST00000620429 Q6ZQT0 140 aa7.26□□□□□ -1.25
VPS11-207ENST00000620429 KRTAP1-3Q8IUG1 177 aa7.26□□□□□ -1.25
VPS11-207ENST00000620429 LINC01356Q8N9X3 169 aa7.26□□□□□ -1.25
VPS11-207ENST00000620429 LOC110117498A0A087WWA1 95 aa7.25□□□□□ -1.25
VPS11-207ENST00000620429 A0A087WZ39 114 aa7.25□□□□□ -1.25
VPS11-207ENST00000620429 DGAT2L7PQ6IED9 249 aa7.25□□□□□ -1.25
VPS11-207ENST00000620429 Q6ZVQ6 151 aa7.25□□□□□ -1.25
VPS11-207ENST00000620429 PRYO14603 147 aa7.25□□□□□ -1.25
VPS11-207ENST00000620429 CCL18P55774 89 aa7.25□□□□□ -1.25
VPS11-207ENST00000620429 Q8N814 137 aa7.25□□□□□ -1.25
VPS11-207ENST00000620429 DSCR9P59020 149 aa7.24□□□□□ -1.25
VPS11-207ENST00000620429 HAMPP81172 84 aa7.24□□□□□ -1.25
VPS11-207ENST00000620429 TLN2Q9Y4G6 2542 aa7.24□□□□□ -1.25
VPS11-207ENST00000620429 NF1P21359 2839 aa7.23□□□□□ -1.25
VPS11-207ENST00000620429 hDV103S1A0JD37 113 aa7.23□□□□□ -1.25
VPS11-207ENST00000620429 Q6ZRP5 223 aa7.23□□□□□ -1.25
VPS11-207ENST00000620429 IGHV4-31P0DP07 118 aa7.22□□□□□ -1.25
VPS11-207ENST00000620429 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
VPS11-207ENST00000620429 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
VPS11-207ENST00000620429 DEFB131AP59861 70 aa7.22□□□□□ -1.25
VPS11-207ENST00000620429 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.25
VPS11-207ENST00000620429 CCDC168Q8NDH2 2452 aa7.21□□□□□ -1.26
VPS11-207ENST00000620429 IGHV3-53P01767 116 aa7.21□□□□□ -1.26
VPS11-207ENST00000620429 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.26
VPS11-207ENST00000620429 TRBV10-1A0A0K0K1A3 114 aa7.2□□□□□ -1.26
VPS11-207ENST00000620429 STHQ8IWL8 128 aa7.2□□□□□ -1.26
VPS11-207ENST00000620429 SONP18583 2426 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms