RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 C1orf134Q5TEV5 83 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 SFTA2Q6UW10 78 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 DAZ4Q86SG3 579 aaKnown RBP3.61□□□□□ -1.83
SHMT1-211ENST00000618902 ARL17AQ8IVW1 177 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 ZNRF2Q8NHG8 242 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 TTTY13Q9BZ97 58 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 Q9H8V8 135 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 DAZ3Q9NR90 486 aaKnown RBP3.61□□□□□ -1.83
SHMT1-211ENST00000618902 DNAH8Q96JB1 4490 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 IGLV4-3A0A075B6K6 122 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 A0A087WWL8 130 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 TRGV4A0A0C4DH28 118 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 NBDYA0A0U1RRE5 68 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 TSPAN13O95857 204 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 ACYP1P07311 99 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 LINC00694P0DN24 101 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
SHMT1-211ENST00000618902 PSMB2P49721 201 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 HERVK_113P63121 156 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 HERV-K104P63124 156 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 ESRGQ1W209 222 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 FAM74A4Q5TZK3 123 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 GEMIN7Q9H840 131 aaKnown RBP3.6□□□□□ -1.83
SHMT1-211ENST00000618902 LINC00588Q9Y4M8 146 aa3.6□□□□□ -1.83
SHMT1-211ENST00000618902 HERC2O95714 4834 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 IGLV5-45A0A087WSX0 123 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 H3BT86 120 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 K7EQD1 137 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 K7ERJ3 54 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 IGHV3-33P01772 117 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 IGHV3-30-3P0DP02 117 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 GYPEP15421 78 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 RPL13AP40429 203 aaKnown RBP3.59□□□□□ -1.83
SHMT1-211ENST00000618902 DGAT2L7PQ6IED9 249 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 C6orf223Q8N319 242 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 ANKRD29Q8N6D5 301 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 GTSF1LQ9H1H1 148 aa3.59□□□□□ -1.83
SHMT1-211ENST00000618902 APOBP04114 4563 aaKnown RBP3.59□□□□□ -1.83
SHMT1-211ENST00000618902 KIAA1109Q2LD37 5005 aa3.59□□□□□ -1.84
SHMT1-211ENST00000618902 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 FAM240AA0A1B0GVK7 77 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 A4D1N5 150 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 SLC25A20O43772 301 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 RPL39P62891 51 aaKnown RBP3.58□□□□□ -1.84
SHMT1-211ENST00000618902 RPL36AP83881 106 aaKnown RBP3.58□□□□□ -1.84
SHMT1-211ENST00000618902 Q6Q795 121 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 MUSTN1Q8IVN3 82 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 RPL36ALQ969Q0 106 aaKnown RBP3.58□□□□□ -1.84
SHMT1-211ENST00000618902 CARD19Q96LW7 228 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 NAA38Q9BRA0 125 aaKnown RBP3.58□□□□□ -1.84
SHMT1-211ENST00000618902 CHCHD7Q9BUK0 85 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 NDUFA12Q9UI09 145 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 UBE2D4Q9Y2X8 147 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
SHMT1-211ENST00000618902 A0A0J9YXV3 536 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 GAGE12JA6NER3 117 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 NDUFA1O15239 70 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 TCL1BO95988 128 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 PRSS2P07478 247 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 DNAH10OSP0CZ25 163 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 GAGE4Q13068 117 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 GAGE5Q13069 117 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 MIAQ16674 131 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 LINC01556Q5JQF7 62 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 LYPD5Q6UWN5 251 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 Q8N3U1 123 aa3.57□□□□□ -1.84
SHMT1-211ENST00000618902 IGHV3-38A0A0C4DH36 116 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 M0R2N4 97 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 RTL8CO15255 209 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 Q1RN00 199 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 LINC01620Q4KN68 170 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 LELP1Q5T871 98 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 WFDC10BQ8IUB3 73 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 TMEM101Q96IK0 257 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 IMUPQ9GZP8 106 aa3.56□□□□□ -1.84
SHMT1-211ENST00000618902 HSPG2P98160 4391 aa3.55□□□□□ -1.84
SHMT1-211ENST00000618902 FAT1Q14517 4588 aa3.55□□□□□ -1.84
SHMT1-211ENST00000618902 TRAV8-3A0A0A6YYJ7 113 aa3.55□□□□□ -1.84
SHMT1-211ENST00000618902 IGLV5-39A0A0G2JS06 123 aa3.55□□□□□ -1.84
SHMT1-211ENST00000618902 A0A1B0GVY2 172 aa3.55□□□□□ -1.84
SHMT1-211ENST00000618902 TRACP01848 142 aa3.55□□□□□ -1.84
SHMT1-211ENST00000618902 LINC01561Q8N1V8 128 aa3.55□□□□□ -1.84
SHMT1-211ENST00000618902 LITAFQ99732 161 aa3.55□□□□□ -1.84
SHMT1-211ENST00000618902 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 C9JAW5 83 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 H0YGX0 51 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 LST1O00453 97 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 LCE2BO14633 110 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 UBE2L6O14933 153 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 CDK2AP2O75956 126 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 SNCGO76070 127 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 TSPEAR-AS2P59090 65 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 CKS1BP61024 79 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 GAGE2BQ13066 116 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 GAGE2EQ4V326 116 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 MEIG1Q5JSS6 88 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 C2orf82Q6UX34 121 aa3.54□□□□□ -1.84
SHMT1-211ENST00000618902 NTM-AS1Q6ZSK4 140 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms