RNA–Protein interactions for RNA: ENST00000615631.4

FDFT1-223, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

APPRIS P1 TSL 5 BASIC

Gene FDFT1, Length 2,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-223	ENST00000615631	PRKDC	P78527	4128 aa	Known RBP	10.32	□□□□□ -0.76
FDFT1-223	ENST00000615631	XCL1	P47992	114 aa		10.32	□□□□□ -0.76
FDFT1-223	ENST00000615631	DAZ2	Q13117	558 aa	Known RBP	10.32	□□□□□ -0.76
FDFT1-223	ENST00000615631	SS18	Q15532	418 aa		10.32	□□□□□ -0.76
FDFT1-223	ENST00000615631	DAZ3	Q9NR90	486 aa	Known RBP	10.32	□□□□□ -0.76
FDFT1-223	ENST00000615631	C11orf21	Q9P2W6	132 aa		10.32	□□□□□ -0.76
FDFT1-223	ENST00000615631		H7BZZ5	65 aa		10.31	□□□□□ -0.76
FDFT1-223	ENST00000615631	C2orf66	Q6UXQ4	117 aa		10.31	□□□□□ -0.76
FDFT1-223	ENST00000615631	C20orf197	Q8N268	126 aa		10.31	□□□□□ -0.76
FDFT1-223	ENST00000615631	IGKV3D-7	A0A0C4DH55	119 aa		10.31	□□□□□ -0.76
FDFT1-223	ENST00000615631	C16orf74	Q96GX8	76 aa		10.31	□□□□□ -0.76
FDFT1-223	ENST00000615631	LINC00474	Q9P2X8	69 aa		10.31	□□□□□ -0.76
FDFT1-223	ENST00000615631	IGKV3D-20	A0A0C4DH25	116 aa		10.3	□□□□□ -0.76
FDFT1-223	ENST00000615631	PRM2	P04554	102 aa		10.3	□□□□□ -0.76
FDFT1-223	ENST00000615631		Q6ZRU5	148 aa		10.3	□□□□□ -0.76
FDFT1-223	ENST00000615631		Q8NAQ8	132 aa		10.3	□□□□□ -0.76
FDFT1-223	ENST00000615631	IGHV4-28	A0A0C4DH34	117 aa		10.3	□□□□□ -0.76
FDFT1-223	ENST00000615631	LYPD5	Q6UWN5	251 aa		10.29	□□□□□ -0.76
FDFT1-223	ENST00000615631	ZNF575	Q86XF7	245 aa		10.29	□□□□□ -0.76
FDFT1-223	ENST00000615631	PRR15	Q8IV56	129 aa		10.29	□□□□□ -0.76
FDFT1-223	ENST00000615631	TIMM17B	O60830	172 aa		10.29	□□□□□ -0.76
FDFT1-223	ENST00000615631	GHRH	P01286	108 aa		10.28	□□□□□ -0.76
FDFT1-223	ENST00000615631	C11orf68	Q9H3H3	251 aa	Known RBP	10.28	□□□□□ -0.76
FDFT1-223	ENST00000615631	GNRH2	O43555	120 aa		10.28	□□□□□ -0.76
FDFT1-223	ENST00000615631	C11orf72	Q8NBR9	251 aa		10.28	□□□□□ -0.76
FDFT1-223	ENST00000615631	SDHAF1	A6NFY7	115 aa		10.27	□□□□□ -0.77
FDFT1-223	ENST00000615631	CCK	P06307	115 aa		10.27	□□□□□ -0.77
FDFT1-223	ENST00000615631	UBE2D4	Q9Y2X8	147 aa		10.27	□□□□□ -0.77
FDFT1-223	ENST00000615631	IGHV3-16	A0A0C4DH30	117 aa		10.27	□□□□□ -0.77
FDFT1-223	ENST00000615631	TENM3	Q9P273	2699 aa		10.27	□□□□□ -0.77
FDFT1-223	ENST00000615631	TRBV7-6	A0A0J9YX20	115 aa		10.26	□□□□□ -0.77
FDFT1-223	ENST00000615631	PLAC8L1	A1L4L8	177 aa		10.26	□□□□□ -0.77
FDFT1-223	ENST00000615631	LEPROT	O15243	131 aa		10.26	□□□□□ -0.77
FDFT1-223	ENST00000615631	DEFB4A	O15263	64 aa		10.26	□□□□□ -0.77
FDFT1-223	ENST00000615631	S100A4	P26447	101 aa	Known RBP	10.26	□□□□□ -0.77
FDFT1-223	ENST00000615631	LAMTOR3	Q9UHA4	124 aa		10.26	□□□□□ -0.77
FDFT1-223	ENST00000615631	COL7A1	Q02388	2944 aa		10.25	□□□□□ -0.77
FDFT1-223	ENST00000615631		A0A0J9YWU9	116 aa		10.25	□□□□□ -0.77
FDFT1-223	ENST00000615631	VSIG2	Q96IQ7	327 aa		10.25	□□□□□ -0.77
FDFT1-223	ENST00000615631	DNAH9	Q9NYC9	4486 aa		10.24	□□□□□ -0.77
FDFT1-223	ENST00000615631	RNASE3	P12724	160 aa	Known RBP	10.24	□□□□□ -0.77
FDFT1-223	ENST00000615631	SUMO2	P61956	95 aa	Known RBP	10.24	□□□□□ -0.77
FDFT1-223	ENST00000615631	FAM222A	Q5U5X8	452 aa		10.24	□□□□□ -0.77
FDFT1-223	ENST00000615631	RBM3	P98179	157 aa	Known RBP	10.24	□□□□□ -0.77
FDFT1-223	ENST00000615631	NOP10	Q9NPE3	64 aa	Known RBP	10.24	□□□□□ -0.77
FDFT1-223	ENST00000615631	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.23	□□□□□ -0.77
FDFT1-223	ENST00000615631	PAX4	O43316	350 aa		10.23	□□□□□ -0.77
FDFT1-223	ENST00000615631	BAALC-AS2	P0C853	105 aa		10.23	□□□□□ -0.77
FDFT1-223	ENST00000615631	MED14OS	P0DP75	135 aa		10.23	□□□□□ -0.77
FDFT1-223	ENST00000615631	LYRM9	A8MSI8	78 aa		10.23	□□□□□ -0.77
FDFT1-223	ENST00000615631	DNAL4	O96015	105 aa		10.23	□□□□□ -0.77
FDFT1-223	ENST00000615631	MRPL55	Q7Z7F7	128 aa	Known RBP	10.23	□□□□□ -0.77
FDFT1-223	ENST00000615631		A0A0J9YXY3	114 aa		10.22	□□□□□ -0.77
FDFT1-223	ENST00000615631	SPART-AS1	P0CW21	52 aa		10.22	□□□□□ -0.77
FDFT1-223	ENST00000615631	TSHB	P01222	138 aa		10.21	□□□□□ -0.77
FDFT1-223	ENST00000615631	ADAMTSL4-AS1	Q5T5F5	129 aa		10.21	□□□□□ -0.77
FDFT1-223	ENST00000615631	PHLDA3	Q9Y5J5	127 aa		10.21	□□□□□ -0.77
FDFT1-223	ENST00000615631	TRGV1	A0A0A0MS02	117 aa		10.2	□□□□□ -0.78
FDFT1-223	ENST00000615631	IGIP	A6NJ69	53 aa		10.2	□□□□□ -0.78
FDFT1-223	ENST00000615631	KLKP1	Q107X0	134 aa		10.2	□□□□□ -0.78
FDFT1-223	ENST00000615631	CELA1	Q9UNI1	258 aa		10.2	□□□□□ -0.78
FDFT1-223	ENST00000615631	MUC4	Q99102	2169 aa		10.2	□□□□□ -0.78
FDFT1-223	ENST00000615631	COX7A2L	O14548	114 aa		10.19	□□□□□ -0.78
FDFT1-223	ENST00000615631	ATP5E	P56381	51 aa	Predicted RBP	10.19	□□□□□ -0.78
FDFT1-223	ENST00000615631	C22orf24	Q9Y442	160 aa		10.19	□□□□□ -0.78
FDFT1-223	ENST00000615631	ZNF876P	Q49A33	203 aa		10.19	□□□□□ -0.78
FDFT1-223	ENST00000615631		Q6ZTI0	123 aa		10.19	□□□□□ -0.78
FDFT1-223	ENST00000615631	C11orf45	Q8TAV5	145 aa		10.19	□□□□□ -0.78
FDFT1-223	ENST00000615631	LITAF	Q99732	161 aa		10.19	□□□□□ -0.78
FDFT1-223	ENST00000615631	LINC00612	Q8N6U2	182 aa		10.18	□□□□□ -0.78
FDFT1-223	ENST00000615631	TMEM141	Q96I45	108 aa		10.18	□□□□□ -0.78
FDFT1-223	ENST00000615631	DEFB130B	P0DP73	79 aa		10.18	□□□□□ -0.78
FDFT1-223	ENST00000615631	DEFB130A	P0DP74	79 aa		10.18	□□□□□ -0.78
FDFT1-223	ENST00000615631	PIK3CD-AS1	Q5SR53	167 aa		10.18	□□□□□ -0.78
FDFT1-223	ENST00000615631	LINC00846	Q9NV44	126 aa		10.18	□□□□□ -0.78
FDFT1-223	ENST00000615631	DAD1	P61803	113 aa		10.17	□□□□□ -0.78
FDFT1-223	ENST00000615631	STAB2	Q8WWQ8	2551 aa		10.17	□□□□□ -0.78
FDFT1-223	ENST00000615631		M0R381	172 aa		10.17	□□□□□ -0.78
FDFT1-223	ENST00000615631	SPANXN1	Q5VSR9	72 aa		10.17	□□□□□ -0.78
FDFT1-223	ENST00000615631	TRGV2	A0A075B6R0	118 aa		10.16	□□□□□ -0.78
FDFT1-223	ENST00000615631	NXPH4	O95158	308 aa		10.16	□□□□□ -0.78
FDFT1-223	ENST00000615631	MPLKIP	Q8TAP9	179 aa		10.16	□□□□□ -0.78
FDFT1-223	ENST00000615631	TRAV23DV6	A0A075B6W5	121 aa		10.16	□□□□□ -0.78
FDFT1-223	ENST00000615631	RPL28	P46779	137 aa	Known RBP	10.16	□□□□□ -0.78
FDFT1-223	ENST00000615631	IGHV4-4	A0A075B6R2	117 aa		10.15	□□□□□ -0.78
FDFT1-223	ENST00000615631	MIA	Q16674	131 aa		10.15	□□□□□ -0.78
FDFT1-223	ENST00000615631		F8WEM9	126 aa		10.15	□□□□□ -0.78
FDFT1-223	ENST00000615631	TIMM17A	Q99595	171 aa		10.15	□□□□□ -0.78
FDFT1-223	ENST00000615631	NANOS2	P60321	138 aa	Known RBP	10.14	□□□□□ -0.79
FDFT1-223	ENST00000615631	TRAV7	A0A075B6U4	112 aa		10.14	□□□□□ -0.79
FDFT1-223	ENST00000615631	BCE1	O60756	84 aa		10.13	□□□□□ -0.79
FDFT1-223	ENST00000615631	IGHV3-64	A0A075B6Q5	118 aa		10.13	□□□□□ -0.79
FDFT1-223	ENST00000615631		Q6ZTC4	211 aa		10.13	□□□□□ -0.79
FDFT1-223	ENST00000615631	RPL39L	Q96EH5	51 aa	Known RBP	10.13	□□□□□ -0.79
FDFT1-223	ENST00000615631		Q9UF83	564 aa		10.13	□□□□□ -0.79
FDFT1-223	ENST00000615631	NDUFC1	O43677	76 aa		10.12	□□□□□ -0.79
FDFT1-223	ENST00000615631	TG	P01266	2768 aa		10.12	□□□□□ -0.79
FDFT1-223	ENST00000615631	ATP5EP2	Q5VTU8	51 aa		10.11	□□□□□ -0.79
FDFT1-223	ENST00000615631	TRAV13-2	A0A0B4J235	113 aa		10.11	□□□□□ -0.79
FDFT1-223	ENST00000615631	PPP1R17	O96001	155 aa		10.1	□□□□□ -0.79

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