RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 PRM2P04554 102 aa4.87□□□□□ -1.63
CLCN3-211ENST00000613795 UNQ6190/PRO20217Q6UXQ8 127 aa4.86□□□□□ -1.63
CLCN3-211ENST00000613795 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
CLCN3-211ENST00000613795 PRR3P79522 188 aaKnown RBP4.86□□□□□ -1.63
CLCN3-211ENST00000613795 PCOTHQ58A44 107 aa4.86□□□□□ -1.63
CLCN3-211ENST00000613795 C6orf223Q8N319 242 aa4.86□□□□□ -1.63
CLCN3-211ENST00000613795 IGHV4-30-4P0DP06 118 aa4.86□□□□□ -1.63
CLCN3-211ENST00000613795 NCOR1O75376 2440 aa4.86□□□□□ -1.63
CLCN3-211ENST00000613795 TM2D3Q9BRN9 247 aa4.85□□□□□ -1.63
CLCN3-211ENST00000613795 C10orf99Q6UWK7 81 aa4.85□□□□□ -1.63
CLCN3-211ENST00000613795 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
CLCN3-211ENST00000613795 ODF3L2Q3SX64 289 aa4.85□□□□□ -1.63
CLCN3-211ENST00000613795 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
CLCN3-211ENST00000613795 REG3GQ6UW15 175 aa4.84□□□□□ -1.63
CLCN3-211ENST00000613795 IGLV4-60A0A075B6I1 120 aa4.84□□□□□ -1.63
CLCN3-211ENST00000613795 LINC00315P59091 139 aa4.84□□□□□ -1.63
CLCN3-211ENST00000613795 A0A1B0GU69 56 aa4.84□□□□□ -1.64
CLCN3-211ENST00000613795 PRR15Q8IV56 129 aa4.84□□□□□ -1.64
CLCN3-211ENST00000613795 C11orf72Q8NBR9 251 aa4.84□□□□□ -1.64
CLCN3-211ENST00000613795 RETNLBQ9BQ08 111 aa4.84□□□□□ -1.64
CLCN3-211ENST00000613795 CREBBPQ92793 2442 aa4.84□□□□□ -1.64
CLCN3-211ENST00000613795 AGRNO00468 2067 aa4.84□□□□□ -1.64
CLCN3-211ENST00000613795 PLCE1Q9P212 2302 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 PLXNB1O43157 2135 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 RPL37AP8A6NKH3 93 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 C9orf116Q5BN46 136 aaPredicted RBP4.83□□□□□ -1.64
CLCN3-211ENST00000613795 C7orf65Q6ZTY9 151 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 PTPRSQ13332 1948 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 LCA10Q71F78 164 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 CPAMD8Q8IZJ3 1885 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 C18orf65Q6ZTR6 163 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 LITAFQ99732 161 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 PRR14LQ5THK1 2151 aa4.83□□□□□ -1.64
CLCN3-211ENST00000613795 H7BZZ5 65 aa4.82□□□□□ -1.64
CLCN3-211ENST00000613795 TECTAO75443 2155 aa4.82□□□□□ -1.64
CLCN3-211ENST00000613795 ELOF1P60002 83 aaKnown RBP4.82□□□□□ -1.64
CLCN3-211ENST00000613795 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-211ENST00000613795 A0A087WSZ3 146 aa4.82□□□□□ -1.64
CLCN3-211ENST00000613795 ACYP2P14621 99 aa4.82□□□□□ -1.64
CLCN3-211ENST00000613795 A8MUN3 132 aa4.81□□□□□ -1.64
CLCN3-211ENST00000613795 EXPH5Q8NEV8 1989 aa4.81□□□□□ -1.64
CLCN3-211ENST00000613795 SPTAN1Q13813 2472 aaKnown RBP4.81□□□□□ -1.64
CLCN3-211ENST00000613795 Q6ZTC4 211 aa4.81□□□□□ -1.64
CLCN3-211ENST00000613795 LINC01600Q96MT4 127 aa4.81□□□□□ -1.64
CLCN3-211ENST00000613795 Q6ZSN1 163 aa4.81□□□□□ -1.64
CLCN3-211ENST00000613795 H3BNG1 76 aa4.81□□□□□ -1.64
CLCN3-211ENST00000613795 TNP2Q05952 138 aa4.81□□□□□ -1.64
CLCN3-211ENST00000613795 AVPP01185 164 aa4.8□□□□□ -1.64
CLCN3-211ENST00000613795 SPINK6Q6UWN8 80 aa4.8□□□□□ -1.64
CLCN3-211ENST00000613795 Q9UF83 564 aa4.8□□□□□ -1.64
CLCN3-211ENST00000613795 ARHGAP32A7KAX9 2087 aa4.8□□□□□ -1.64
CLCN3-211ENST00000613795 ADAMTS20P59510 1910 aa4.8□□□□□ -1.64
CLCN3-211ENST00000613795 IGHV3OR16-9A0A0B4J2B5 98 aa4.8□□□□□ -1.64
CLCN3-211ENST00000613795 LY6G6CO95867 125 aa4.8□□□□□ -1.64
CLCN3-211ENST00000613795 Q9BRP9 147 aa4.8□□□□□ -1.64
CLCN3-211ENST00000613795 IGHV6-1A0A0B4J1U7 121 aa4.79□□□□□ -1.64
CLCN3-211ENST00000613795 IGLV5-52A0A0A0MRZ9 124 aa4.79□□□□□ -1.64
CLCN3-211ENST00000613795 COL6A6A6NMZ7 2263 aa4.79□□□□□ -1.64
CLCN3-211ENST00000613795 CACNA1HO95180 2353 aa4.79□□□□□ -1.64
CLCN3-211ENST00000613795 PRRC2AP48634 2157 aaKnown RBP4.79□□□□□ -1.64
CLCN3-211ENST00000613795 LOC101927531A0A1B0GV80 90 aa4.78□□□□□ -1.64
CLCN3-211ENST00000613795 A8MTW9 85 aa4.78□□□□□ -1.64
CLCN3-211ENST00000613795 ABCA4P78363 2273 aa4.78□□□□□ -1.64
CLCN3-211ENST00000613795 NOTCH3Q9UM47 2321 aa4.78□□□□□ -1.64
CLCN3-211ENST00000613795 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
CLCN3-211ENST00000613795 TRAV22A0A0B4J277 110 aa4.78□□□□□ -1.64
CLCN3-211ENST00000613795 KIAA0087Q14695 138 aa4.78□□□□□ -1.64
CLCN3-211ENST00000613795 LYPD5Q6UWN5 251 aa4.78□□□□□ -1.64
CLCN3-211ENST00000613795 CACNA1BQ00975 2339 aa4.77□□□□□ -1.65
CLCN3-211ENST00000613795 CDSNQ15517 529 aa4.77□□□□□ -1.65
CLCN3-211ENST00000613795 Q8NBF4 154 aa4.77□□□□□ -1.65
CLCN3-211ENST00000613795 C1orf134Q5TEV5 83 aa4.77□□□□□ -1.65
CLCN3-211ENST00000613795 SPTBN2O15020 2390 aa4.77□□□□□ -1.65
CLCN3-211ENST00000613795 KLK9Q2XQG4 91 aa4.76□□□□□ -1.65
CLCN3-211ENST00000613795 X6R8D5 127 aa4.76□□□□□ -1.65
CLCN3-211ENST00000613795 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
CLCN3-211ENST00000613795 FSHBP01225 129 aa4.75□□□□□ -1.65
CLCN3-211ENST00000613795 C6orf48Q9UBA6 75 aa4.75□□□□□ -1.65
CLCN3-211ENST00000613795 COA5Q86WW8 74 aa4.75□□□□□ -1.65
CLCN3-211ENST00000613795 ACACAQ13085 2346 aa4.75□□□□□ -1.65
CLCN3-211ENST00000613795 LINC01556Q5JQF7 62 aa4.75□□□□□ -1.65
CLCN3-211ENST00000613795 CACNA1GO43497 2377 aa4.75□□□□□ -1.65
CLCN3-211ENST00000613795 M0R2N4 97 aa4.74□□□□□ -1.65
CLCN3-211ENST00000613795 DSCAMO60469 2012 aa4.74□□□□□ -1.65
CLCN3-211ENST00000613795 NAV3Q8IVL0 2385 aa4.74□□□□□ -1.65
CLCN3-211ENST00000613795 Q1T7F1 81 aa4.74□□□□□ -1.65
CLCN3-211ENST00000613795 EP300Q09472 2414 aaPredicted RBP4.74□□□□□ -1.65
CLCN3-211ENST00000613795 KRTAP10-9P60411 292 aa4.73□□□□□ -1.65
CLCN3-211ENST00000613795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLCN3-211ENST00000613795 COL4A2P08572 1712 aa4.73□□□□□ -1.65
CLCN3-211ENST00000613795 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
CLCN3-211ENST00000613795 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
CLCN3-211ENST00000613795 Q5XG85 94 aa4.72□□□□□ -1.65
CLCN3-211ENST00000613795 Q6ZRU5 148 aa4.72□□□□□ -1.65
CLCN3-211ENST00000613795 UQCR11O14957 56 aa4.71□□□□□ -1.65
CLCN3-211ENST00000613795 GVINP1Q7Z2Y8 2422 aa4.71□□□□□ -1.66
CLCN3-211ENST00000613795 A0A1W2PPR1 153 aa4.71□□□□□ -1.66
CLCN3-211ENST00000613795 SPINT4Q6UDR6 99 aa4.71□□□□□ -1.66
CLCN3-211ENST00000613795 RAI1Q7Z5J4 1906 aaPredicted RBP4.71□□□□□ -1.66
CLCN3-211ENST00000613795 SPANXA2-OT1Q8N9U9 137 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms