RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 TRAV13-1A0A0B4J241 112 aa15.55■□□□□ 0.08
POLR2J3-220ENST00000613744 A0A0U1RRA0 63 aa15.54■□□□□ 0.08
POLR2J3-220ENST00000613744 NDUFC2-KCTD14E9PQ53 114 aa15.54■□□□□ 0.08
POLR2J3-220ENST00000613744 Q9HAA7 133 aa15.54■□□□□ 0.08
POLR2J3-220ENST00000613744 CMYA5Q8N3K9 4069 aa15.54■□□□□ 0.08
POLR2J3-220ENST00000613744 Q9UF83 564 aa15.53■□□□□ 0.08
POLR2J3-220ENST00000613744 NACAE9PAV3 2078 aa15.53■□□□□ 0.08
POLR2J3-220ENST00000613744 KNCNA6PVL3 124 aa15.53■□□□□ 0.08
POLR2J3-220ENST00000613744 F5H768 121 aa15.53■□□□□ 0.08
POLR2J3-220ENST00000613744 RS1O15537 224 aa15.53■□□□□ 0.08
POLR2J3-220ENST00000613744 USP17L23D6RBM5 183 aa15.52■□□□□ 0.08
POLR2J3-220ENST00000613744 DEFB114Q30KQ6 69 aa15.52■□□□□ 0.08
POLR2J3-220ENST00000613744 WFDC9Q8NEX5 89 aa15.52■□□□□ 0.08
POLR2J3-220ENST00000613744 CYSTM1Q9H1C7 97 aa15.52■□□□□ 0.08
POLR2J3-220ENST00000613744 LINC00846Q9NV44 126 aa15.51■□□□□ 0.07
POLR2J3-220ENST00000613744 IGHV3-38A0A0C4DH36 116 aa15.5■□□□□ 0.07
POLR2J3-220ENST00000613744 OXLD1Q5BKU9 147 aa15.5■□□□□ 0.07
POLR2J3-220ENST00000613744 S100A7L2Q5SY68 101 aa15.5■□□□□ 0.07
POLR2J3-220ENST00000613744 C14orf132Q9NPU4 83 aa15.5■□□□□ 0.07
POLR2J3-220ENST00000613744 IGKV3D-7A0A0C4DH55 119 aa15.49■□□□□ 0.07
POLR2J3-220ENST00000613744 ATP5EP2Q5VTU8 51 aa15.49■□□□□ 0.07
POLR2J3-220ENST00000613744 LINC01561Q8N1V8 128 aa15.49■□□□□ 0.07
POLR2J3-220ENST00000613744 LINC00337Q8N6G1 96 aa15.48■□□□□ 0.07
POLR2J3-220ENST00000613744 KIR2DL5BQ8NHK3 375 aa15.48■□□□□ 0.07
POLR2J3-220ENST00000613744 NDUFC2O95298 119 aa15.47■□□□□ 0.07
POLR2J3-220ENST00000613744 HTN1P15515 57 aa15.47■□□□□ 0.07
POLR2J3-220ENST00000613744 C9orf66Q5T8R8 295 aa15.47■□□□□ 0.07
POLR2J3-220ENST00000613744 C11orf72Q8NBR9 251 aa15.47■□□□□ 0.07
POLR2J3-220ENST00000613744 A0A087WYN8 130 aa15.46■□□□□ 0.07
POLR2J3-220ENST00000613744 IGLV1-51P01701 117 aa15.46■□□□□ 0.07
POLR2J3-220ENST00000613744 SMIM11BQ8TCY0 68 aa15.46■□□□□ 0.07
POLR2J3-220ENST00000613744 SND1-IT1Q9HBX3 110 aa15.46■□□□□ 0.07
POLR2J3-220ENST00000613744 IGKV2-28A0A075B6P5 120 aa15.45■□□□□ 0.06
POLR2J3-220ENST00000613744 IGKV2D-28P01615 120 aa15.45■□□□□ 0.06
POLR2J3-220ENST00000613744 CDC42SE2Q9NRR3 84 aa15.44■□□□□ 0.06
POLR2J3-220ENST00000613744 TRBV10-1A0A0K0K1A3 114 aa15.43■□□□□ 0.06
POLR2J3-220ENST00000613744 OXTP01178 125 aa15.42■□□□□ 0.06
POLR2J3-220ENST00000613744 CCKP06307 115 aa15.42■□□□□ 0.06
POLR2J3-220ENST00000613744 C9orf129Q5T035 196 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-220ENST00000613744 MIR7-3HGQ8N6C7 128 aa15.42■□□□□ 0.06
POLR2J3-220ENST00000613744 DSCR8Q96T75 97 aa15.42■□□□□ 0.06
POLR2J3-220ENST00000613744 SORL1Q92673 2214 aa15.42■□□□□ 0.06
POLR2J3-220ENST00000613744 Q5XG85 94 aa15.41■□□□□ 0.06
POLR2J3-220ENST00000613744 A0A087WVE0 104 aa15.4■□□□□ 0.06
POLR2J3-220ENST00000613744 RBMY1BA6NDE4 496 aaKnown RBP15.4■□□□□ 0.06
POLR2J3-220ENST00000613744 RBMY1EA6NEQ0 496 aaKnown RBP15.4■□□□□ 0.06
POLR2J3-220ENST00000613744 RBMY1DP0C7P1 496 aaKnown RBP15.4■□□□□ 0.06
POLR2J3-220ENST00000613744 RPL36AP83881 106 aaKnown RBP15.4■□□□□ 0.06
POLR2J3-220ENST00000613744 COX7B2Q8TF08 81 aa15.4■□□□□ 0.06
POLR2J3-220ENST00000613744 RPL36ALQ969Q0 106 aaKnown RBP15.4■□□□□ 0.06
POLR2J3-220ENST00000613744 TRBV10-3A0A0K0K1G6 114 aa15.39■□□□□ 0.05
POLR2J3-220ENST00000613744 DEFB131AP59861 70 aa15.39■□□□□ 0.05
POLR2J3-220ENST00000613744 MRAPQ8TCY5 172 aa15.38■□□□□ 0.05
POLR2J3-220ENST00000613744 ORMDL1Q9P0S3 153 aa15.38■□□□□ 0.05
POLR2J3-220ENST00000613744 LECT2O14960 151 aa15.37■□□□□ 0.05
POLR2J3-220ENST00000613744 BCE1O60756 84 aa15.37■□□□□ 0.05
POLR2J3-220ENST00000613744 JMJD7-PLA2G4BH0Y9G9 81 aa15.37■□□□□ 0.05
POLR2J3-220ENST00000613744 LYPD5Q6UWN5 251 aa15.37■□□□□ 0.05
POLR2J3-220ENST00000613744 MAP6D1Q9H9H5 199 aa15.37■□□□□ 0.05
POLR2J3-220ENST00000613744 MGAM2Q2M2H8 2515 aa15.36■□□□□ 0.05
POLR2J3-220ENST00000613744 IBA57-AS1B1ANH7 110 aa15.36■□□□□ 0.05
POLR2J3-220ENST00000613744 KRTAP10-11P60412 298 aa15.36■□□□□ 0.05
POLR2J3-220ENST00000613744 LINC00167Q96N53 147 aa15.36■□□□□ 0.05
POLR2J3-220ENST00000613744 INSP01308 110 aa15.36■□□□□ 0.05
POLR2J3-220ENST00000613744 NCR3O14931 201 aa15.34■□□□□ 0.05
POLR2J3-220ENST00000613744 CCL18P55774 89 aa15.34■□□□□ 0.05
POLR2J3-220ENST00000613744 NTM-AS1Q6ZSK4 140 aa15.34■□□□□ 0.05
POLR2J3-220ENST00000613744 K7EQD1 137 aa15.34■□□□□ 0.05
POLR2J3-220ENST00000613744 C4orf26Q17RF5 130 aa15.34■□□□□ 0.05
POLR2J3-220ENST00000613744 ODF3L2Q3SX64 289 aa15.34■□□□□ 0.05
POLR2J3-220ENST00000613744 GHRHP01286 108 aa15.33■□□□□ 0.04
POLR2J3-220ENST00000613744 FHL2Q14192 279 aa15.33■□□□□ 0.04
POLR2J3-220ENST00000613744 WFDC10AQ9H1F0 79 aa15.33■□□□□ 0.04
POLR2J3-220ENST00000613744 PRM2P04554 102 aa15.32■□□□□ 0.04
POLR2J3-220ENST00000613744 LINC00158P58513 81 aa15.32■□□□□ 0.04
POLR2J3-220ENST00000613744 PRB2P02812 416 aaPredicted RBP15.32■□□□□ 0.04
POLR2J3-220ENST00000613744 NOTCH1P46531 2555 aa15.32■□□□□ 0.04
POLR2J3-220ENST00000613744 IL17DQ8TAD2 202 aa15.31■□□□□ 0.04
POLR2J3-220ENST00000613744 EPM2AB3EWF7 344 aa15.31■□□□□ 0.04
POLR2J3-220ENST00000613744 SS18Q15532 418 aa15.3■□□□□ 0.04
POLR2J3-220ENST00000613744 TMEM243Q9BU79 118 aa15.3■□□□□ 0.04
POLR2J3-220ENST00000613744 UBE2L6O14933 153 aa15.29■□□□□ 0.04
POLR2J3-220ENST00000613744 HRCT1Q6UXD1 115 aa15.29■□□□□ 0.04
POLR2J3-220ENST00000613744 TRBV6-4A0A1B0GX49 114 aa15.29■□□□□ 0.04
POLR2J3-220ENST00000613744 EGFEM1PQ0D2K5 195 aa15.29■□□□□ 0.04
POLR2J3-220ENST00000613744 NBEAL1Q6ZS30 2694 aa15.28■□□□□ 0.04
POLR2J3-220ENST00000613744 FAM236DA0A1B0GTK5 79 aa15.26■□□□□ 0.03
POLR2J3-220ENST00000613744 FAM236CP0DP71 79 aa15.26■□□□□ 0.03
POLR2J3-220ENST00000613744 C19orf73Q9NVV2 129 aa15.26■□□□□ 0.03
POLR2J3-220ENST00000613744 SERP1Q9Y6X1 66 aa15.26■□□□□ 0.03
POLR2J3-220ENST00000613744 TMEM256-PLSCR3K7ERE1 68 aa15.25■□□□□ 0.03
POLR2J3-220ENST00000613744 STHQ8IWL8 128 aa15.25■□□□□ 0.03
POLR2J3-220ENST00000613744 PAX4O43316 350 aa15.24■□□□□ 0.03
POLR2J3-220ENST00000613744 UBL5Q9BZL1 73 aa15.23■□□□□ 0.03
POLR2J3-220ENST00000613744 TOMM7Q9P0U1 55 aa15.23■□□□□ 0.03
POLR2J3-220ENST00000613744 XCL1P47992 114 aa15.23■□□□□ 0.03
POLR2J3-220ENST00000613744 CMC4P56277 68 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-220ENST00000613744 XCL2Q9UBD3 114 aa15.23■□□□□ 0.03
POLR2J3-220ENST00000613744 DNAH3Q8TD57 4116 aa15.22■□□□□ 0.03
POLR2J3-220ENST00000613744 TRGV1A0A0A0MS02 117 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms