RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 USP17L23D6RBM5 183 aa13.35□□□□□ -0.27
CPNE9-205ENST00000613455 CXCL5P42830 114 aa13.35□□□□□ -0.27
CPNE9-205ENST00000613455 HERV-K104P63124 156 aa13.34□□□□□ -0.27
CPNE9-205ENST00000613455 CTAG1AP78358 180 aa13.34□□□□□ -0.27
CPNE9-205ENST00000613455 CKS1BP61024 79 aa13.33□□□□□ -0.27
CPNE9-205ENST00000613455 SFTA2Q6UW10 78 aa13.33□□□□□ -0.27
CPNE9-205ENST00000613455 NTN5Q8WTR8 489 aaPredicted RBP13.33□□□□□ -0.27
CPNE9-205ENST00000613455 LITAFQ99732 161 aa13.33□□□□□ -0.27
CPNE9-205ENST00000613455 DNAH2Q9P225 4427 aa13.33□□□□□ -0.28
CPNE9-205ENST00000613455 LINC00587B1AMM8 73 aa13.33□□□□□ -0.28
CPNE9-205ENST00000613455 PSCAO43653 123 aa13.33□□□□□ -0.28
CPNE9-205ENST00000613455 WFDC2Q14508 124 aa13.33□□□□□ -0.28
CPNE9-205ENST00000613455 ZNF561-AS1K7EIQ3 104 aa13.32□□□□□ -0.28
CPNE9-205ENST00000613455 LECT2O14960 151 aa13.32□□□□□ -0.28
CPNE9-205ENST00000613455 C10orf25Q5T742 122 aa13.32□□□□□ -0.28
CPNE9-205ENST00000613455 UNQ6190/PRO20217Q6UXQ8 127 aa13.3□□□□□ -0.28
CPNE9-205ENST00000613455 C2orf48Q96LS8 159 aa13.3□□□□□ -0.28
CPNE9-205ENST00000613455 HYDINQ4G0P3 5121 aa13.29□□□□□ -0.28
CPNE9-205ENST00000613455 TIMM17BO60830 172 aa13.29□□□□□ -0.28
CPNE9-205ENST00000613455 ADAMTSL4-AS1Q5T5F5 129 aa13.29□□□□□ -0.28
CPNE9-205ENST00000613455 SPANXB1Q9NS25 103 aaPredicted RBP13.29□□□□□ -0.28
CPNE9-205ENST00000613455 TMEM238C9JI98 176 aa13.28□□□□□ -0.28
CPNE9-205ENST00000613455 MEIG1Q5JSS6 88 aa13.28□□□□□ -0.28
CPNE9-205ENST00000613455 CAMK2N2Q96S95 79 aa13.27□□□□□ -0.28
CPNE9-205ENST00000613455 SACSQ9NZJ4 4579 aa13.27□□□□□ -0.28
CPNE9-205ENST00000613455 LRCOL1A6NCL2 159 aa13.27□□□□□ -0.29
CPNE9-205ENST00000613455 SMIM13P0DJ93 91 aa13.27□□□□□ -0.29
CPNE9-205ENST00000613455 HSD52Q0P140 79 aa13.27□□□□□ -0.29
CPNE9-205ENST00000613455 A0A0U1RRA0 63 aa13.26□□□□□ -0.29
CPNE9-205ENST00000613455 C9orf116Q5BN46 136 aaPredicted RBP13.26□□□□□ -0.29
CPNE9-205ENST00000613455 HIST1H4GQ99525 98 aa13.26□□□□□ -0.29
CPNE9-205ENST00000613455 C6orf48Q9UBA6 75 aa13.26□□□□□ -0.29
CPNE9-205ENST00000613455 ERG28Q9UKR5 140 aa13.26□□□□□ -0.29
CPNE9-205ENST00000613455 SLPIP03973 132 aa13.25□□□□□ -0.29
CPNE9-205ENST00000613455 Q6ZRU5 148 aa13.25□□□□□ -0.29
CPNE9-205ENST00000613455 DAND5Q8N907 189 aa13.25□□□□□ -0.29
CPNE9-205ENST00000613455 SPANXDQ9BXN6 97 aa13.25□□□□□ -0.29
CPNE9-205ENST00000613455 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
CPNE9-205ENST00000613455 F8WDY8 70 aa13.25□□□□□ -0.29
CPNE9-205ENST00000613455 CIRBPQ14011 172 aaKnown RBP13.25□□□□□ -0.29
CPNE9-205ENST00000613455 TAL2Q16559 108 aa13.25□□□□□ -0.29
CPNE9-205ENST00000613455 C1orf134Q5TEV5 83 aa13.25□□□□□ -0.29
CPNE9-205ENST00000613455 SRSF9Q13242 221 aaKnown RBP eCLIP13.24□□□□□ -0.29
CPNE9-205ENST00000613455 PFN2P35080 140 aa13.23□□□□□ -0.29
CPNE9-205ENST00000613455 HINT1P49773 126 aaPredicted RBP13.23□□□□□ -0.29
CPNE9-205ENST00000613455 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
CPNE9-205ENST00000613455 SYCNQ0VAF6 134 aa13.22□□□□□ -0.29
CPNE9-205ENST00000613455 CEND1Q8N111 149 aa13.22□□□□□ -0.29
CPNE9-205ENST00000613455 LCE6AA0A183 80 aa13.22□□□□□ -0.29
CPNE9-205ENST00000613455 LINC00158P58513 81 aa13.22□□□□□ -0.29
CPNE9-205ENST00000613455 BVES-AS1Q5T3Y7 98 aa13.22□□□□□ -0.29
CPNE9-205ENST00000613455 FRAS1Q86XX4 4008 aa13.21□□□□□ -0.29
CPNE9-205ENST00000613455 GCSHP23434 173 aa13.21□□□□□ -0.3
CPNE9-205ENST00000613455 COX17Q14061 63 aa13.21□□□□□ -0.3
CPNE9-205ENST00000613455 EIF4EBP3O60516 100 aaPredicted RBP13.2□□□□□ -0.3
CPNE9-205ENST00000613455 C14orf177Q52M58 125 aa13.2□□□□□ -0.3
CPNE9-205ENST00000613455 Q6ZVH6 145 aa13.2□□□□□ -0.3
CPNE9-205ENST00000613455 MIR7-3HGQ8N6C7 128 aa13.2□□□□□ -0.3
CPNE9-205ENST00000613455 CARD19Q96LW7 228 aa13.2□□□□□ -0.3
CPNE9-205ENST00000613455 SNHG12Q9BXW3 62 aa13.2□□□□□ -0.3
CPNE9-205ENST00000613455 DNAH17Q9UFH2 4485 aa13.2□□□□□ -0.3
CPNE9-205ENST00000613455 FXYD2P54710 66 aa13.19□□□□□ -0.3
CPNE9-205ENST00000613455 EREGO14944 169 aa13.19□□□□□ -0.3
CPNE9-205ENST00000613455 NPC2P61916 151 aa13.19□□□□□ -0.3
CPNE9-205ENST00000613455 MUSTN1Q8IVN3 82 aa13.19□□□□□ -0.3
CPNE9-205ENST00000613455 M0R143 59 aa13.18□□□□□ -0.3
CPNE9-205ENST00000613455 SOSTDC1Q6X4U4 206 aa13.18□□□□□ -0.3
CPNE9-205ENST00000613455 LINC00308Q8TCZ7 52 aa13.17□□□□□ -0.3
CPNE9-205ENST00000613455 A0A087WTM6 91 aa13.16□□□□□ -0.3
CPNE9-205ENST00000613455 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
CPNE9-205ENST00000613455 CNBPP62633 177 aaKnown RBP13.16□□□□□ -0.3
CPNE9-205ENST00000613455 BATFQ16520 125 aa13.16□□□□□ -0.3
CPNE9-205ENST00000613455 IFITM1P13164 125 aa13.16□□□□□ -0.3
CPNE9-205ENST00000613455 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.15□□□□□ -0.3
CPNE9-205ENST00000613455 RNF151Q2KHN1 245 aa13.15□□□□□ -0.3
CPNE9-205ENST00000613455 Q8N814 137 aa13.15□□□□□ -0.3
CPNE9-205ENST00000613455 RTL8CO15255 209 aa13.14□□□□□ -0.31
CPNE9-205ENST00000613455 NDUFC2-KCTD14E9PQ53 114 aa13.12□□□□□ -0.31
CPNE9-205ENST00000613455 RPL24P83731 157 aaKnown RBP13.12□□□□□ -0.31
CPNE9-205ENST00000613455 PPDPFQ9H3Y8 114 aa13.12□□□□□ -0.31
CPNE9-205ENST00000613455 SND1-IT1Q9HBX3 110 aa13.12□□□□□ -0.31
CPNE9-205ENST00000613455 A4D1N5 150 aa13.11□□□□□ -0.31
CPNE9-205ENST00000613455 KMT2CQ8NEZ4 4911 aaKnown RBP13.11□□□□□ -0.31
CPNE9-205ENST00000613455 HECTD4Q9Y4D8 3996 aa13.11□□□□□ -0.31
CPNE9-205ENST00000613455 TNP2Q05952 138 aa13.1□□□□□ -0.31
CPNE9-205ENST00000613455 TLX1NBP0CAT3 122 aa13.1□□□□□ -0.31
CPNE9-205ENST00000613455 Q6ZRP5 223 aa13.1□□□□□ -0.31
CPNE9-205ENST00000613455 COPS9Q8WXC6 57 aa13.1□□□□□ -0.31
CPNE9-205ENST00000613455 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.09□□□□□ -0.31
CPNE9-205ENST00000613455 LOC107984156A0A0G2JMH3 177 aa13.09□□□□□ -0.31
CPNE9-205ENST00000613455 ARL17AQ8IVW1 177 aa13.09□□□□□ -0.31
CPNE9-205ENST00000613455 NHP2Q9NX24 153 aaKnown RBP13.09□□□□□ -0.31
CPNE9-205ENST00000613455 TMEM238LA0A1B0GVL6 79 aa13.08□□□□□ -0.32
CPNE9-205ENST00000613455 A6NJY4 79 aa13.08□□□□□ -0.32
CPNE9-205ENST00000613455 RYR2Q92736 4967 aa13.08□□□□□ -0.32
CPNE9-205ENST00000613455 FAT2Q9NYQ8 4349 aa13.07□□□□□ -0.32
CPNE9-205ENST00000613455 XAGE1AQ9HD64 81 aa13.07□□□□□ -0.32
CPNE9-205ENST00000613455 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
CPNE9-205ENST00000613455 A6NDN8 102 aa13.05□□□□□ -0.32
CPNE9-205ENST00000613455 K7ERJ3 54 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms