RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 REG3AQ06141 175 aa8.22□□□□□ -1.09
USP6NL-206ENST00000609853 MTURNQ8N3F0 131 aa8.22□□□□□ -1.09
USP6NL-206ENST00000609853 COX7A2LO14548 114 aa8.21□□□□□ -1.09
USP6NL-206ENST00000609853 SLC25A20O43772 301 aa8.21□□□□□ -1.09
USP6NL-206ENST00000609853 HTN3P15516 51 aa8.21□□□□□ -1.09
USP6NL-206ENST00000609853 LINC00158P58513 81 aa8.21□□□□□ -1.09
USP6NL-206ENST00000609853 FOXI1Q12951 378 aa8.21□□□□□ -1.09
USP6NL-206ENST00000609853 LINC01620Q4KN68 170 aa8.21□□□□□ -1.09
USP6NL-206ENST00000609853 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.09
USP6NL-206ENST00000609853 C9JAW5 83 aa8.2□□□□□ -1.1
USP6NL-206ENST00000609853 PPDPFLQ8WWR9 84 aa8.2□□□□□ -1.1
USP6NL-206ENST00000609853 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
USP6NL-206ENST00000609853 TRBV10-2A0A0K0K1G8 114 aa8.2□□□□□ -1.1
USP6NL-206ENST00000609853 LST1O00453 97 aa8.19□□□□□ -1.1
USP6NL-206ENST00000609853 ANKRD29Q8N6D5 301 aa8.19□□□□□ -1.1
USP6NL-206ENST00000609853 CKS1BP61024 79 aa8.18□□□□□ -1.1
USP6NL-206ENST00000609853 COX17Q14061 63 aa8.18□□□□□ -1.1
USP6NL-206ENST00000609853 CLPSL2Q6UWE3 100 aa8.18□□□□□ -1.1
USP6NL-206ENST00000609853 SND1-IT1Q9HBX3 110 aa8.18□□□□□ -1.1
USP6NL-206ENST00000609853 PRR34Q9NV39 138 aa8.18□□□□□ -1.1
USP6NL-206ENST00000609853 H3BT86 120 aa8.17□□□□□ -1.1
USP6NL-206ENST00000609853 MALP21145 153 aa8.17□□□□□ -1.1
USP6NL-206ENST00000609853 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
USP6NL-206ENST00000609853 LYPD5Q6UWN5 251 aa8.17□□□□□ -1.1
USP6NL-206ENST00000609853 DNHD1Q96M86 4753 aa8.17□□□□□ -1.1
USP6NL-206ENST00000609853 CRPP02741 224 aa8.17□□□□□ -1.1
USP6NL-206ENST00000609853 MUC7Q8TAX7 377 aa8.17□□□□□ -1.1
USP6NL-206ENST00000609853 STAB1Q9NY15 2570 aa8.16□□□□□ -1.1
USP6NL-206ENST00000609853 TRAV8-4A0A0B4J246 113 aa8.16□□□□□ -1.1
USP6NL-206ENST00000609853 CCL18P55774 89 aa8.16□□□□□ -1.1
USP6NL-206ENST00000609853 KIAA0087Q14695 138 aa8.16□□□□□ -1.1
USP6NL-206ENST00000609853 KLK5Q9Y337 293 aaPredicted RBP8.16□□□□□ -1.1
USP6NL-206ENST00000609853 FBN1P35555 2871 aaKnown RBP8.16□□□□□ -1.1
USP6NL-206ENST00000609853 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.1
USP6NL-206ENST00000609853 KPRPQ5T749 579 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-206ENST00000609853 SPATA25Q9BR10 227 aa8.15□□□□□ -1.1
USP6NL-206ENST00000609853 PFN2P35080 140 aa8.15□□□□□ -1.11
USP6NL-206ENST00000609853 CARD19Q96LW7 228 aa8.15□□□□□ -1.11
USP6NL-206ENST00000609853 RETNQ9HD89 108 aa8.15□□□□□ -1.11
USP6NL-206ENST00000609853 GAGE12HA6NDE8 117 aa8.14□□□□□ -1.11
USP6NL-206ENST00000609853 CLEC2BQ92478 149 aa8.14□□□□□ -1.11
USP6NL-206ENST00000609853 PKD1L1Q8TDX9 2849 aa8.14□□□□□ -1.11
USP6NL-206ENST00000609853 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
USP6NL-206ENST00000609853 IGKV2-28A0A075B6P5 120 aa8.13□□□□□ -1.11
USP6NL-206ENST00000609853 IGKV2D-28P01615 120 aa8.13□□□□□ -1.11
USP6NL-206ENST00000609853 TRACP01848 142 aa8.13□□□□□ -1.11
USP6NL-206ENST00000609853 C2orf82Q6UX34 121 aa8.13□□□□□ -1.11
USP6NL-206ENST00000609853 Q6ZTC4 211 aa8.13□□□□□ -1.11
USP6NL-206ENST00000609853 Q8N3U1 123 aa8.13□□□□□ -1.11
USP6NL-206ENST00000609853 CMYA5Q8N3K9 4069 aa8.12□□□□□ -1.11
USP6NL-206ENST00000609853 LINC00337Q8N6G1 96 aa8.12□□□□□ -1.11
USP6NL-206ENST00000609853 KLK12Q9UKR0 248 aa8.12□□□□□ -1.11
USP6NL-206ENST00000609853 NDUFC2O95298 119 aa8.12□□□□□ -1.11
USP6NL-206ENST00000609853 PCP4P48539 62 aa8.12□□□□□ -1.11
USP6NL-206ENST00000609853 C11orf45Q8TAV5 145 aa8.12□□□□□ -1.11
USP6NL-206ENST00000609853 H0YGX0 51 aa8.11□□□□□ -1.11
USP6NL-206ENST00000609853 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
USP6NL-206ENST00000609853 ENHOQ6UWT2 76 aa8.11□□□□□ -1.11
USP6NL-206ENST00000609853 SIGMAR1Q99720 223 aa8.11□□□□□ -1.11
USP6NL-206ENST00000609853 DNAH3Q8TD57 4116 aa8.11□□□□□ -1.11
USP6NL-206ENST00000609853 A0A0J9YWU9 116 aa8.1□□□□□ -1.11
USP6NL-206ENST00000609853 NTN5Q8WTR8 489 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-206ENST00000609853 DEFB131BA0A096LNP1 70 aa8.09□□□□□ -1.11
USP6NL-206ENST00000609853 SPAG11BQ08648 103 aa8.09□□□□□ -1.11
USP6NL-206ENST00000609853 UBE2WQ96B02 151 aa8.09□□□□□ -1.11
USP6NL-206ENST00000609853 GVQW2A0A096LPI5 108 aaPredicted RBP8.09□□□□□ -1.11
USP6NL-206ENST00000609853 SMIM11BQ8TCY0 68 aa8.08□□□□□ -1.12
USP6NL-206ENST00000609853 NANOS2P60321 138 aaKnown RBP8.07□□□□□ -1.12
USP6NL-206ENST00000609853 SCGB1A1P11684 91 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 ESRGQ1W209 222 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 DEFB121Q5J5C9 76 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 LINC01556Q5JQF7 62 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 WFDC10BQ8IUB3 73 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 COL6A5A8TX70 2615 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 C15orf53Q8NAA6 179 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 OR13C6PQ8NH95 151 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 TM2D3Q9BRN9 247 aa8.06□□□□□ -1.12
USP6NL-206ENST00000609853 TRAV10A0A0B4J240 114 aa8.05□□□□□ -1.12
USP6NL-206ENST00000609853 TEX49A0A1B0GTD5 131 aa8.05□□□□□ -1.12
USP6NL-206ENST00000609853 MDFIQ99750 246 aa8.05□□□□□ -1.12
USP6NL-206ENST00000609853 TMEM126AQ9H061 195 aa8.05□□□□□ -1.12
USP6NL-206ENST00000609853 CDIP1Q9H305 208 aa8.05□□□□□ -1.12
USP6NL-206ENST00000609853 ANK2Q01484 3957 aa8.05□□□□□ -1.12
USP6NL-206ENST00000609853 F8WDY8 70 aa8.04□□□□□ -1.12
USP6NL-206ENST00000609853 DNAL4O96015 105 aa8.03□□□□□ -1.12
USP6NL-206ENST00000609853 UNQ6190/PRO20217Q6UXQ8 127 aa8.03□□□□□ -1.12
USP6NL-206ENST00000609853 FAM240AA0A1B0GVK7 77 aa8.03□□□□□ -1.12
USP6NL-206ENST00000609853 A0A1B0GX51 115 aa8.03□□□□□ -1.12
USP6NL-206ENST00000609853 BAALC-AS2P0C853 105 aa8.03□□□□□ -1.12
USP6NL-206ENST00000609853 FAM218AQ96MZ4 157 aa8.03□□□□□ -1.12
USP6NL-206ENST00000609853 TENM3Q9P273 2699 aa8.02□□□□□ -1.13
USP6NL-206ENST00000609853 ZNF561-AS1K7EIQ3 104 aa8.02□□□□□ -1.13
USP6NL-206ENST00000609853 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
USP6NL-206ENST00000609853 KRTAP26-1Q6PEX3 210 aa8.02□□□□□ -1.13
USP6NL-206ENST00000609853 C6orf223Q8N319 242 aa8.02□□□□□ -1.13
USP6NL-206ENST00000609853 K7EIL1 84 aa8.01□□□□□ -1.13
USP6NL-206ENST00000609853 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
USP6NL-206ENST00000609853 C10orf25Q5T742 122 aa8.01□□□□□ -1.13
USP6NL-206ENST00000609853 C2orf48Q96LS8 159 aa8.01□□□□□ -1.13
USP6NL-206ENST00000609853 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms