RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PRB3Q04118 309 aaPredicted RBP5.88□□□□□ -1.47
COMMD3-215ENST00000602574 PRR4Q16378 134 aa5.88□□□□□ -1.47
COMMD3-215ENST00000602574 CHCHD10Q8WYQ3 142 aaPredicted RBP5.88□□□□□ -1.47
COMMD3-215ENST00000602574 SPINK7P58062 85 aa5.87□□□□□ -1.47
COMMD3-215ENST00000602574 COA5Q86WW8 74 aa5.87□□□□□ -1.47
COMMD3-215ENST00000602574 ZNF318Q5VUA4 2279 aa5.87□□□□□ -1.47
COMMD3-215ENST00000602574 PRB1P04280 392 aa5.87□□□□□ -1.47
COMMD3-215ENST00000602574 SPAG11BQ08648 103 aa5.87□□□□□ -1.47
COMMD3-215ENST00000602574 ODF3L2Q3SX64 289 aa5.86□□□□□ -1.47
COMMD3-215ENST00000602574 USMG5Q96IX5 58 aa5.86□□□□□ -1.47
COMMD3-215ENST00000602574 XAGE1AQ9HD64 81 aa5.86□□□□□ -1.47
COMMD3-215ENST00000602574 IGHV3OR16-8A0A075B7F1 116 aa5.86□□□□□ -1.47
COMMD3-215ENST00000602574 ROMO1P60602 79 aa5.86□□□□□ -1.47
COMMD3-215ENST00000602574 C1orf134Q5TEV5 83 aa5.86□□□□□ -1.47
COMMD3-215ENST00000602574 ST20-AS1Q8NBB2 130 aa5.86□□□□□ -1.47
COMMD3-215ENST00000602574 ZFP36P26651 326 aaKnown RBP5.85□□□□□ -1.47
COMMD3-215ENST00000602574 PLCE1Q9P212 2302 aa5.85□□□□□ -1.47
COMMD3-215ENST00000602574 HIGD2BQ4VC39 106 aa5.84□□□□□ -1.47
COMMD3-215ENST00000602574 C10orf25Q5T742 122 aa5.84□□□□□ -1.47
COMMD3-215ENST00000602574 Q6ZQY7 126 aa5.84□□□□□ -1.47
COMMD3-215ENST00000602574 LAMA2P24043 3122 aaKnown RBP5.84□□□□□ -1.48
COMMD3-215ENST00000602574 GYPEP15421 78 aa5.83□□□□□ -1.48
COMMD3-215ENST00000602574 C9orf163Q8N9P6 203 aa5.83□□□□□ -1.48
COMMD3-215ENST00000602574 DEFB109BQ30KR1 87 aa5.83□□□□□ -1.48
COMMD3-215ENST00000602574 H0Y9P7 68 aa5.82□□□□□ -1.48
COMMD3-215ENST00000602574 COX17Q14061 63 aa5.82□□□□□ -1.48
COMMD3-215ENST00000602574 C11orf71Q6IPW1 123 aa5.82□□□□□ -1.48
COMMD3-215ENST00000602574 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
COMMD3-215ENST00000602574 DSCR9P59020 149 aa5.82□□□□□ -1.48
COMMD3-215ENST00000602574 C5orf42Q9H799 3197 aa5.81□□□□□ -1.48
COMMD3-215ENST00000602574 ABCA1O95477 2261 aa5.81□□□□□ -1.48
COMMD3-215ENST00000602574 KPRPQ5T749 579 aaPredicted RBP5.81□□□□□ -1.48
COMMD3-215ENST00000602574 SDK1Q7Z5N4 2213 aa5.8□□□□□ -1.48
COMMD3-215ENST00000602574 MKI67P46013 3256 aaKnown RBP5.8□□□□□ -1.48
COMMD3-215ENST00000602574 CSAG1Q6PB30 78 aa5.8□□□□□ -1.48
COMMD3-215ENST00000602574 SPAG11AQ6PDA7 123 aa5.8□□□□□ -1.48
COMMD3-215ENST00000602574 C5orf56Q8N8D9 126 aa5.8□□□□□ -1.48
COMMD3-215ENST00000602574 FAM186AA6NE01 2351 aa5.8□□□□□ -1.48
COMMD3-215ENST00000602574 LAMA3Q16787 3333 aa5.8□□□□□ -1.48
COMMD3-215ENST00000602574 TRGV4A0A0C4DH28 118 aa5.79□□□□□ -1.48
COMMD3-215ENST00000602574 Q6ZR54 194 aa5.79□□□□□ -1.48
COMMD3-215ENST00000602574 UNC80Q8N2C7 3258 aa5.78□□□□□ -1.48
COMMD3-215ENST00000602574 IGHV3OR16-13A0A075B7E8 117 aa5.78□□□□□ -1.48
COMMD3-215ENST00000602574 IGHV3-74A0A0B4J1X5 117 aa5.78□□□□□ -1.48
COMMD3-215ENST00000602574 TOMM7Q9P0U1 55 aa5.78□□□□□ -1.48
COMMD3-215ENST00000602574 CUL9Q8IWT3 2517 aa5.78□□□□□ -1.48
COMMD3-215ENST00000602574 LINC00959A0A1B0GUT2 108 aa5.77□□□□□ -1.49
COMMD3-215ENST00000602574 PRB2P02812 416 aaPredicted RBP5.77□□□□□ -1.49
COMMD3-215ENST00000602574 Q8IZM0 81 aa5.77□□□□□ -1.49
COMMD3-215ENST00000602574 TECTAO75443 2155 aa5.77□□□□□ -1.49
COMMD3-215ENST00000602574 COL6A3P12111 3177 aa5.77□□□□□ -1.49
COMMD3-215ENST00000602574 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
COMMD3-215ENST00000602574 DEFB112Q30KQ8 113 aa5.77□□□□□ -1.49
COMMD3-215ENST00000602574 RHPN1-AS1Q9BWJ2 59 aa5.77□□□□□ -1.49
COMMD3-215ENST00000602574 AHCTF1Q8WYP5 2266 aa5.76□□□□□ -1.49
COMMD3-215ENST00000602574 URB1O60287 2271 aaKnown RBP5.76□□□□□ -1.49
COMMD3-215ENST00000602574 IGHV4-61A0A0C4DH41 118 aa5.76□□□□□ -1.49
COMMD3-215ENST00000602574 A8MTW9 85 aa5.76□□□□□ -1.49
COMMD3-215ENST00000602574 SPATA8Q6RVD6 105 aa5.76□□□□□ -1.49
COMMD3-215ENST00000602574 CR1P17927 2039 aa5.75□□□□□ -1.49
COMMD3-215ENST00000602574 G3V318 75 aa5.75□□□□□ -1.49
COMMD3-215ENST00000602574 PRO3102Q9H379 93 aa5.75□□□□□ -1.49
COMMD3-215ENST00000602574 KLK12Q9UKR0 248 aa5.75□□□□□ -1.49
COMMD3-215ENST00000602574 LYNX1G3V0Z9 82 aa5.74□□□□□ -1.49
COMMD3-215ENST00000602574 LYNX1P0DP58 116 aa5.74□□□□□ -1.49
COMMD3-215ENST00000602574 PROK1P58294 105 aa5.74□□□□□ -1.49
COMMD3-215ENST00000602574 REG3AQ06141 175 aa5.74□□□□□ -1.49
COMMD3-215ENST00000602574 DSCR10P59022 87 aa5.73□□□□□ -1.49
COMMD3-215ENST00000602574 DEFB1P60022 68 aa5.73□□□□□ -1.49
COMMD3-215ENST00000602574 Q6ZSN1 163 aa5.73□□□□□ -1.49
COMMD3-215ENST00000602574 IGKV2D-24A0A075B6R9 120 aa5.73□□□□□ -1.49
COMMD3-215ENST00000602574 DNAH14Q0VDD8 3507 aa5.72□□□□□ -1.49
COMMD3-215ENST00000602574 IGHV4-28A0A0C4DH34 117 aa5.72□□□□□ -1.49
COMMD3-215ENST00000602574 IGLV5-48A0A075B6I7 105 aa5.72□□□□□ -1.49
COMMD3-215ENST00000602574 IGLV1-40P01703 118 aa5.72□□□□□ -1.49
COMMD3-215ENST00000602574 IGHV3-11P01762 117 aa5.72□□□□□ -1.49
COMMD3-215ENST00000602574 SORL1Q92673 2214 aa5.71□□□□□ -1.49
COMMD3-215ENST00000602574 REG3GQ6UW15 175 aa5.71□□□□□ -1.5
COMMD3-215ENST00000602574 ICE1Q9Y2F5 2266 aa5.71□□□□□ -1.5
COMMD3-215ENST00000602574 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.5
COMMD3-215ENST00000602574 Q8NDZ9 215 aa5.71□□□□□ -1.5
COMMD3-215ENST00000602574 REV3LO60673 3130 aa5.7□□□□□ -1.5
COMMD3-215ENST00000602574 K7EQZ3 153 aa5.68□□□□□ -1.5
COMMD3-215ENST00000602574 SPRR4Q96PI1 79 aa5.68□□□□□ -1.5
COMMD3-215ENST00000602574 CDH23Q9H251 3354 aa5.68□□□□□ -1.5
COMMD3-215ENST00000602574 A6NDX4 124 aa5.68□□□□□ -1.5
COMMD3-215ENST00000602574 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
COMMD3-215ENST00000602574 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
COMMD3-215ENST00000602574 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
COMMD3-215ENST00000602574 DEFB124Q8NES8 71 aa5.67□□□□□ -1.5
COMMD3-215ENST00000602574 IGLV5-37A0A075B6J1 123 aa5.66□□□□□ -1.5
COMMD3-215ENST00000602574 CDK2AP2O75956 126 aa5.65□□□□□ -1.5
COMMD3-215ENST00000602574 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
COMMD3-215ENST00000602574 WDR87Q6ZQQ6 2873 aa5.65□□□□□ -1.5
COMMD3-215ENST00000602574 DEFB131BA0A096LNP1 70 aa5.65□□□□□ -1.51
COMMD3-215ENST00000602574 DNAJC9-AS1A6NH13 148 aa5.65□□□□□ -1.51
COMMD3-215ENST00000602574 SPINK13Q1W4C9 94 aa5.65□□□□□ -1.51
COMMD3-215ENST00000602574 Q8NBF4 154 aa5.65□□□□□ -1.51
COMMD3-215ENST00000602574 MED13LQ71F56 2210 aa5.65□□□□□ -1.51
COMMD3-215ENST00000602574 A0A087WSZ3 146 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms