RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 EPM2AB3EWF7 344 aa11.62□□□□□ -0.55
CIRBP-235ENST00000591935 IGHV3-30P01768 117 aa11.62□□□□□ -0.55
CIRBP-235ENST00000591935 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
CIRBP-235ENST00000591935 IGHV3-30-5P0DP03 117 aa11.62□□□□□ -0.55
CIRBP-235ENST00000591935 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
CIRBP-235ENST00000591935 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.553e-7■■□□□ 13.7
CIRBP-235ENST00000591935 LINC00242Q5T6M2 205 aa11.62□□□□□ -0.55
CIRBP-235ENST00000591935 XGP55808 180 aa11.61□□□□□ -0.55
CIRBP-235ENST00000591935 VAMP3Q15836 100 aa11.61□□□□□ -0.55
CIRBP-235ENST00000591935 Q6ZVH6 145 aa11.61□□□□□ -0.55
CIRBP-235ENST00000591935 Q9HAA7 133 aa11.61□□□□□ -0.55
CIRBP-235ENST00000591935 IGLV5-52A0A0A0MRZ9 124 aa11.6□□□□□ -0.55
CIRBP-235ENST00000591935 LRCOL1A6NCL2 159 aa11.6□□□□□ -0.55
CIRBP-235ENST00000591935 Q8N3U1 123 aa11.6□□□□□ -0.55
CIRBP-235ENST00000591935 A0A1B0GUV1 79 aa11.59□□□□□ -0.55
CIRBP-235ENST00000591935 CHCHD5Q9BSY4 110 aa11.59□□□□□ -0.55
CIRBP-235ENST00000591935 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
CIRBP-235ENST00000591935 TRAV8-3A0A0A6YYJ7 113 aa11.58□□□□□ -0.56
CIRBP-235ENST00000591935 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.56
CIRBP-235ENST00000591935 TMEM238C9JI98 176 aa11.58□□□□□ -0.56
CIRBP-235ENST00000591935 GAGE6Q13070 117 aa11.58□□□□□ -0.56
CIRBP-235ENST00000591935 NHP2Q9NX24 153 aaKnown RBP11.58□□□□□ -0.56
CIRBP-235ENST00000591935 A0A0J9YXY3 114 aa11.57□□□□□ -0.56
CIRBP-235ENST00000591935 TIMM17BO60830 172 aa11.57□□□□□ -0.56
CIRBP-235ENST00000591935 SPINK8P0C7L1 97 aa11.57□□□□□ -0.56
CIRBP-235ENST00000591935 COX6A2Q02221 97 aa11.57□□□□□ -0.56
CIRBP-235ENST00000591935 Q8N814 137 aa11.57□□□□□ -0.56
CIRBP-235ENST00000591935 NDUFA12Q9UI09 145 aa11.57□□□□□ -0.56
CIRBP-235ENST00000591935 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
CIRBP-235ENST00000591935 CCL25O15444 150 aa11.56□□□□□ -0.56
CIRBP-235ENST00000591935 FAT1Q14517 4588 aa11.55□□□□□ -0.56
CIRBP-235ENST00000591935 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
CIRBP-235ENST00000591935 H3BUT2 72 aa11.55□□□□□ -0.56
CIRBP-235ENST00000591935 NDUFA1O15239 70 aa11.55□□□□□ -0.56
CIRBP-235ENST00000591935 GTF2H5Q6ZYL4 71 aa11.55□□□□□ -0.56
CIRBP-235ENST00000591935 RAB37Q96AX2 223 aa11.54□□□□□ -0.56
CIRBP-235ENST00000591935 RMI2Q96E14 147 aa11.54□□□□□ -0.56
CIRBP-235ENST00000591935 SPANXDQ9BXN6 97 aa11.54□□□□□ -0.56
CIRBP-235ENST00000591935 SPANXCQ9NY87 97 aa11.54□□□□□ -0.56
CIRBP-235ENST00000591935 A0A1W2PPM0 123 aa11.53□□□□□ -0.56
CIRBP-235ENST00000591935 FABP2P12104 132 aa11.53□□□□□ -0.56
CIRBP-235ENST00000591935 RPL24P83731 157 aaKnown RBP11.53□□□□□ -0.56
CIRBP-235ENST00000591935 IGLV4-60A0A075B6I1 120 aa11.52□□□□□ -0.57
CIRBP-235ENST00000591935 GAGE10A6NGK3 116 aa11.52□□□□□ -0.57
CIRBP-235ENST00000591935 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.57
CIRBP-235ENST00000591935 WFDC2Q14508 124 aa11.52□□□□□ -0.57
CIRBP-235ENST00000591935 Q5VSD8 79 aa11.52□□□□□ -0.57
CIRBP-235ENST00000591935 K7EP34 96 aa11.51□□□□□ -0.57
CIRBP-235ENST00000591935 INAFM2P0DMQ5 153 aa11.51□□□□□ -0.57
CIRBP-235ENST00000591935 HAMPP81172 84 aa11.51□□□□□ -0.57
CIRBP-235ENST00000591935 LINC01561Q8N1V8 128 aa11.51□□□□□ -0.57
CIRBP-235ENST00000591935 FAM229AH3BQW9 127 aa11.5□□□□□ -0.57
CIRBP-235ENST00000591935 K7ERJ3 54 aa11.5□□□□□ -0.57
CIRBP-235ENST00000591935 IFITM1P13164 125 aa11.5□□□□□ -0.57
CIRBP-235ENST00000591935 RBX1P62877 108 aa11.5□□□□□ -0.57
CIRBP-235ENST00000591935 HERV-K104P63124 156 aa11.5□□□□□ -0.57
CIRBP-235ENST00000591935 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
CIRBP-235ENST00000591935 LITAFQ99732 161 aa11.5□□□□□ -0.57
CIRBP-235ENST00000591935 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-235ENST00000591935 TMEM262E9PQX1 116 aa11.49□□□□□ -0.57
CIRBP-235ENST00000591935 SMR3BP02814 79 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-235ENST00000591935 IGHV3OR16-9A0A0B4J2B5 98 aa11.48□□□□□ -0.57
CIRBP-235ENST00000591935 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
CIRBP-235ENST00000591935 SS18Q15532 418 aa11.48□□□□□ -0.57
CIRBP-235ENST00000591935 PPDPFQ9H3Y8 114 aa11.48□□□□□ -0.57
CIRBP-235ENST00000591935 VPS13BQ7Z7G8 4022 aa11.48□□□□□ -0.57
CIRBP-235ENST00000591935 SRRM2Q9UQ35 2752 aaKnown RBP11.47□□□□□ -0.57
CIRBP-235ENST00000591935 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
CIRBP-235ENST00000591935 LECT2O14960 151 aa11.47□□□□□ -0.57
CIRBP-235ENST00000591935 MIAQ16674 131 aa11.47□□□□□ -0.57
CIRBP-235ENST00000591935 MUSTN1Q8IVN3 82 aa11.47□□□□□ -0.57
CIRBP-235ENST00000591935 COPS9Q8WXC6 57 aa11.47□□□□□ -0.57
CIRBP-235ENST00000591935 FAM30AQ9NZY2 134 aa11.47□□□□□ -0.57
CIRBP-235ENST00000591935 KLK12Q9UKR0 248 aa11.47□□□□□ -0.57
CIRBP-235ENST00000591935 SPCS1Q9Y6A9 102 aa11.47□□□□□ -0.57
CIRBP-235ENST00000591935 A0A087WZ39 114 aa11.46□□□□□ -0.57
CIRBP-235ENST00000591935 CFC1BP0CG36 223 aa11.46□□□□□ -0.57
CIRBP-235ENST00000591935 CFC1P0CG37 223 aa11.46□□□□□ -0.57
CIRBP-235ENST00000591935 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
CIRBP-235ENST00000591935 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
CIRBP-235ENST00000591935 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
CIRBP-235ENST00000591935 ZNF625Q96I27 306 aaPredicted RBP11.45□□□□□ -0.58
CIRBP-235ENST00000591935 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
CIRBP-235ENST00000591935 A4D1N5 150 aa11.44□□□□□ -0.58
CIRBP-235ENST00000591935 LYRM7Q5U5X0 104 aa11.44□□□□□ -0.58
CIRBP-235ENST00000591935 NAA38Q9BRA0 125 aaKnown RBP11.44□□□□□ -0.58
CIRBP-235ENST00000591935 PRO1854Q9UHT4 67 aa11.44□□□□□ -0.58
CIRBP-235ENST00000591935 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
CIRBP-235ENST00000591935 APOMO95445 188 aa11.43□□□□□ -0.58
CIRBP-235ENST00000591935 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
CIRBP-235ENST00000591935 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.42□□□□□ -0.58
CIRBP-235ENST00000591935 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
CIRBP-235ENST00000591935 CRPP02741 224 aa11.41□□□□□ -0.58
CIRBP-235ENST00000591935 PRSS2P07478 247 aa11.41□□□□□ -0.58
CIRBP-235ENST00000591935 HERC1Q15751 4861 aa11.41□□□□□ -0.58
CIRBP-235ENST00000591935 IGKV3OR2-268A0A0C4DH90 116 aa11.4□□□□□ -0.58
CIRBP-235ENST00000591935 TSPAN13O95857 204 aa11.4□□□□□ -0.58
CIRBP-235ENST00000591935 C14orf177Q52M58 125 aa11.4□□□□□ -0.58
CIRBP-235ENST00000591935 Q6ZSA8 131 aa11.4□□□□□ -0.58
CIRBP-235ENST00000591935 C1orf43Q9BWL3 253 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms