RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ZNF22P17026 224 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-212ENST00000591126 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
SMAD4-212ENST00000591126 CRIP1P50238 77 aa4.39□□□□□ -1.71
SMAD4-212ENST00000591126 HAMPP81172 84 aa4.39□□□□□ -1.71
SMAD4-212ENST00000591126 Q6ZSN1 163 aa4.39□□□□□ -1.71
SMAD4-212ENST00000591126 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
SMAD4-212ENST00000591126 H0Y9J4 135 aa4.39□□□□□ -1.71
SMAD4-212ENST00000591126 HIST1H4AP62805 103 aaKnown RBP4.39□□□□□ -1.71
SMAD4-212ENST00000591126 ZNF73O43830 326 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-212ENST00000591126 LAMA1P25391 3075 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 TEX49A0A1B0GTD5 131 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 EPM2AB3EWF7 344 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 LST1O00453 97 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 CASC10Q5T4H9 136 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 SPTSSBQ8NFR3 76 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 APLNQ9ULZ1 77 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 SORL1Q92673 2214 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 H3BT86 120 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 COX6A2Q02221 97 aa4.38□□□□□ -1.71
SMAD4-212ENST00000591126 TP73-AS1Q9UF72 201 aa4.37□□□□□ -1.71
SMAD4-212ENST00000591126 XAGE1AQ9HD64 81 aa4.37□□□□□ -1.71
SMAD4-212ENST00000591126 JMJD1CQ15652 2540 aa4.37□□□□□ -1.71
SMAD4-212ENST00000591126 F8W1H4 67 aa4.37□□□□□ -1.71
SMAD4-212ENST00000591126 LCE6AA0A183 80 aa4.37□□□□□ -1.71
SMAD4-212ENST00000591126 GVQW2A0A096LPI5 108 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-212ENST00000591126 PCP2Q8IVA1 136 aa4.36□□□□□ -1.71
SMAD4-212ENST00000591126 LINC00308Q8TCZ7 52 aa4.36□□□□□ -1.71
SMAD4-212ENST00000591126 C11orf21Q9P2W6 132 aa4.36□□□□□ -1.71
SMAD4-212ENST00000591126 ABCA12Q86UK0 2595 aa4.36□□□□□ -1.71
SMAD4-212ENST00000591126 A0A0U1RQV1 116 aa4.36□□□□□ -1.71
SMAD4-212ENST00000591126 H3BMG7 143 aa4.36□□□□□ -1.71
SMAD4-212ENST00000591126 MTORP42345 2549 aa4.36□□□□□ -1.71
SMAD4-212ENST00000591126 ANKRD17O75179 2603 aaKnown RBP4.36□□□□□ -1.71
SMAD4-212ENST00000591126 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-212ENST00000591126 NAA38Q9BRA0 125 aaKnown RBP4.36□□□□□ -1.71
SMAD4-212ENST00000591126 PRRC2CQ9Y520 2896 aaKnown RBP4.36□□□□□ -1.71
SMAD4-212ENST00000591126 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 LINC00612Q8N6U2 182 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 KRTAP10-3P60369 221 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 PYY3Q5JQD4 70 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 A0A1B0GW54 56 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 ADCYAP1P18509 176 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 LINC00242Q5T6M2 205 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 TRBV7-6A0A0J9YX20 115 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 ATP5EP2Q5VTU8 51 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 AMELXQ99217 191 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 TNCP24821 2201 aa4.35□□□□□ -1.71
SMAD4-212ENST00000591126 C9orf118A6NHY6 69 aa4.34□□□□□ -1.71
SMAD4-212ENST00000591126 WNK1Q9H4A3 2382 aa4.34□□□□□ -1.71
SMAD4-212ENST00000591126 A0A087WTM6 91 aa4.34□□□□□ -1.71
SMAD4-212ENST00000591126 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
SMAD4-212ENST00000591126 PRR14LQ5THK1 2151 aa4.34□□□□□ -1.71
SMAD4-212ENST00000591126 ZNF575Q86XF7 245 aa4.34□□□□□ -1.72
SMAD4-212ENST00000591126 IGKV2-28A0A075B6P5 120 aa4.33□□□□□ -1.72
SMAD4-212ENST00000591126 BPY2O14599 106 aa4.33□□□□□ -1.72
SMAD4-212ENST00000591126 IGKV2D-28P01615 120 aa4.33□□□□□ -1.72
SMAD4-212ENST00000591126 XGP55808 180 aa4.33□□□□□ -1.72
SMAD4-212ENST00000591126 UNQ6190/PRO20217Q6UXQ8 127 aa4.33□□□□□ -1.72
SMAD4-212ENST00000591126 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
SMAD4-212ENST00000591126 TYMSOSQ8TAI1 123 aa4.33□□□□□ -1.72
SMAD4-212ENST00000591126 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
SMAD4-212ENST00000591126 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 IGIPA6NJ69 53 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 C6orf99Q4VX62 202 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 Q8N814 137 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 COL27A1Q8IZC6 1860 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-212ENST00000591126 FAM236DA0A1B0GTK5 79 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 FAM236CP0DP71 79 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 IGLV4-60A0A075B6I1 120 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 C22orf24Q9Y442 160 aa4.32□□□□□ -1.72
SMAD4-212ENST00000591126 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
SMAD4-212ENST00000591126 DAND5Q8N907 189 aa4.31□□□□□ -1.72
SMAD4-212ENST00000591126 Q6ZRU5 148 aa4.31□□□□□ -1.72
SMAD4-212ENST00000591126 Q8NBF4 154 aa4.31□□□□□ -1.72
SMAD4-212ENST00000591126 FLNBO75369 2602 aaKnown RBP4.31□□□□□ -1.72
SMAD4-212ENST00000591126 BCE1O60756 84 aa4.31□□□□□ -1.72
SMAD4-212ENST00000591126 DSPP15924 2871 aaKnown RBP4.31□□□□□ -1.72
SMAD4-212ENST00000591126 USP9XQ93008 2570 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-212ENST00000591126 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
SMAD4-212ENST00000591126 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
SMAD4-212ENST00000591126 LINC00173Q6ZV60 143 aa4.3□□□□□ -1.72
SMAD4-212ENST00000591126 SPEGQ15772 3267 aa4.3□□□□□ -1.72
SMAD4-212ENST00000591126 MYO9AB2RTY4 2548 aa4.3□□□□□ -1.72
SMAD4-212ENST00000591126 H3BS24 57 aa4.29□□□□□ -1.72
SMAD4-212ENST00000591126 Q9BRP9 147 aa4.29□□□□□ -1.72
SMAD4-212ENST00000591126 C9orf163Q8N9P6 203 aa4.29□□□□□ -1.72
SMAD4-212ENST00000591126 PPDPFQ9H3Y8 114 aa4.29□□□□□ -1.72
SMAD4-212ENST00000591126 PSORS1C2Q9UIG4 136 aa4.29□□□□□ -1.72
SMAD4-212ENST00000591126 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
SMAD4-212ENST00000591126 IGKV4-1P06312 121 aa4.29□□□□□ -1.72
SMAD4-212ENST00000591126 CNBPP62633 177 aaKnown RBP4.29□□□□□ -1.72
SMAD4-212ENST00000591126 ARHGAP32A7KAX9 2087 aa4.28□□□□□ -1.72
SMAD4-212ENST00000591126 A0A1W2PPM0 123 aa4.28□□□□□ -1.72
SMAD4-212ENST00000591126 FREM2Q5SZK8 3169 aa4.28□□□□□ -1.72
SMAD4-212ENST00000591126 A0A096LNI7 61 aa4.28□□□□□ -1.72
SMAD4-212ENST00000591126 C1orf195Q5TG92 126 aa4.28□□□□□ -1.72
SMAD4-212ENST00000591126 CELSR3Q9NYQ7 3312 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 MGAQ8IWI9 3026 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms