RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 PRR4Q16378 134 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 LINC00208Q96KT6 92 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 S4R3C0 116 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 GPR179Q6PRD1 2367 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 IGHV3-49A0A0A0MS15 119 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 A0A1B0GUV1 79 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 TFF1P04155 84 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 BSPH1Q075Z2 132 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 FAM104AQ969W3 186 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 CFAP54Q96N23 3096 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 TNCP24821 2201 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 A0A1B0GW54 56 aa3.75□□□□□ -1.81
LINC01538-201ENST00000588074 CDKN2A-AS1Q9UH64 79 aa3.75□□□□□ -1.81
LINC01538-201ENST00000588074 M0QY20 66 aa3.75□□□□□ -1.81
LINC01538-201ENST00000588074 IGLV1-51P01701 117 aa3.75□□□□□ -1.81
LINC01538-201ENST00000588074 RNASE3P12724 160 aaKnown RBP3.75□□□□□ -1.81
LINC01538-201ENST00000588074 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.75□□□□□ -1.81
LINC01538-201ENST00000588074 PATE1Q8WXA2 126 aa3.75□□□□□ -1.81
LINC01538-201ENST00000588074 ZNF702PQ9H963 129 aa3.75□□□□□ -1.81
LINC01538-201ENST00000588074 DPM3Q9P2X0 92 aa3.75□□□□□ -1.81
LINC01538-201ENST00000588074 IGHV3-73A0A0B4J1V6 119 aa3.74□□□□□ -1.81
LINC01538-201ENST00000588074 B4DSR2 109 aa3.74□□□□□ -1.81
LINC01538-201ENST00000588074 DEFB133Q30KQ1 61 aa3.74□□□□□ -1.81
LINC01538-201ENST00000588074 PLAC8Q9NZF1 115 aa3.74□□□□□ -1.81
LINC01538-201ENST00000588074 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
LINC01538-201ENST00000588074 MALRD1Q5VYJ5 2156 aa3.74□□□□□ -1.81
LINC01538-201ENST00000588074 COX7A1P24310 79 aa3.73□□□□□ -1.81
LINC01538-201ENST00000588074 DCHS1Q96JQ0 3298 aa3.73□□□□□ -1.81
LINC01538-201ENST00000588074 COL27A1Q8IZC6 1860 aaPredicted RBP3.73□□□□□ -1.81
LINC01538-201ENST00000588074 IGHV1-3A0A0C4DH29 117 aa3.73□□□□□ -1.81
LINC01538-201ENST00000588074 TRBV6-4A0A1B0GX49 114 aa3.73□□□□□ -1.81
LINC01538-201ENST00000588074 PRR9Q5T870 116 aa3.73□□□□□ -1.81
LINC01538-201ENST00000588074 ZFAND2AQ8N6M9 145 aa3.73□□□□□ -1.81
LINC01538-201ENST00000588074 DOCK10Q96BY6 2186 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 DMXL1Q9Y485 3027 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 CACNA1HO95180 2353 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 ZFHX2Q9C0A1 2572 aaPredicted RBP3.72□□□□□ -1.81
LINC01538-201ENST00000588074 IGHV3-64DA0A0J9YX35 117 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 SPTY2D1-AS1A0A0U1RR47 76 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 ETDCA0A1B0GVM5 59 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 NDUFA4O00483 81 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 IGHV3-53P01767 116 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 MUC7Q8TAX7 377 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 KNL1Q8NG31 2342 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 MUC6Q6W4X9 2439 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 IGLV8-61A0A075B6I0 122 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 IGLV4-60A0A075B6I1 120 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 KRTAP4-5Q9BYR2 181 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 SDK2Q58EX2 2172 aa3.72□□□□□ -1.81
LINC01538-201ENST00000588074 NAV3Q8IVL0 2385 aa3.71□□□□□ -1.81
LINC01538-201ENST00000588074 TRGV2A0A075B6R0 118 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 KRTAP4-16G5E9R7 235 aaPredicted RBP3.71□□□□□ -1.82
LINC01538-201ENST00000588074 M0R2N4 97 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 IGKV3-15P01624 115 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 CCL18P55774 89 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 RNF5Q99942 180 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 CADP27708 2225 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 RP1P56715 2156 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 EP300Q09472 2414 aaPredicted RBP3.71□□□□□ -1.82
LINC01538-201ENST00000588074 SVILO95425 2214 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.71□□□□□ -1.82
LINC01538-201ENST00000588074 CLPSL1A2RUU4 121 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 RTL8CO15255 209 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 IGHV1-8P0DP01 117 aa3.71□□□□□ -1.82
LINC01538-201ENST00000588074 CNBPP62633 177 aaKnown RBP3.71□□□□□ -1.82
LINC01538-201ENST00000588074 LINC01006Q8NI28 216 aa3.7□□□□□ -1.82
LINC01538-201ENST00000588074 DEFB104AQ8WTQ1 72 aa3.7□□□□□ -1.82
LINC01538-201ENST00000588074 WFDC10AQ9H1F0 79 aa3.7□□□□□ -1.82
LINC01538-201ENST00000588074 DNAJC13O75165 2243 aa3.7□□□□□ -1.82
LINC01538-201ENST00000588074 H3BPC8 53 aa3.7□□□□□ -1.82
LINC01538-201ENST00000588074 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
LINC01538-201ENST00000588074 Q8NAQ8 132 aa3.7□□□□□ -1.82
LINC01538-201ENST00000588074 ZNF318Q5VUA4 2279 aa3.7□□□□□ -1.82
LINC01538-201ENST00000588074 FREM2Q5SZK8 3169 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 IGLV11-55A0A075B6I3 123 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 IGLV7-46A0A075B6I9 117 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 CCL3P10147 92 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 DEFB124Q8NES8 71 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 COX7B2Q8TF08 81 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 CHCHD7Q9BUK0 85 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 ZNRD1Q9P1U0 126 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 IGHV3-23P01764 117 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 APELAP0DMC3 54 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 COX7BP24311 80 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 C1orf134Q5TEV5 83 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 LINC00575Q6W349 94 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 ADM2Q7Z4H4 148 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 Q8N377 158 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 KCNQ1DNQ9H478 68 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 XAGE1AQ9HD64 81 aa3.69□□□□□ -1.82
LINC01538-201ENST00000588074 LAMA5O15230 3695 aa3.68□□□□□ -1.82
LINC01538-201ENST00000588074 A0A096LNT2 108 aa3.68□□□□□ -1.82
LINC01538-201ENST00000588074 C7orf33Q8WU49 177 aa3.68□□□□□ -1.82
LINC01538-201ENST00000588074 GAFA1Q96PS6 74 aa3.68□□□□□ -1.82
LINC01538-201ENST00000588074 PTPRZ1P23471 2315 aaPredicted RBP3.68□□□□□ -1.82
LINC01538-201ENST00000588074 RIF1Q5UIP0 2472 aaKnown RBP3.68□□□□□ -1.82
LINC01538-201ENST00000588074 LINC00158P58513 81 aa3.68□□□□□ -1.82
LINC01538-201ENST00000588074 ROMO1P60602 79 aa3.68□□□□□ -1.82
LINC01538-201ENST00000588074 COX6A2Q02221 97 aa3.68□□□□□ -1.82
LINC01538-201ENST00000588074 LINC00612Q8N6U2 182 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms