RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 PKD1L1Q8TDX9 2849 aa0□□□□□ -2.41
PPP4R1-227ENST00000583988 TRAV30A0A087WSZ9 112 aa0□□□□□ -2.41
PPP4R1-227ENST00000583988 ABCC5O15440 1437 aa0□□□□□ -2.41
PPP4R1-227ENST00000583988 PSMG4Q5JS54 123 aa0□□□□□ -2.41
PPP4R1-227ENST00000583988 TENM4Q6N022 2769 aa0□□□□□ -2.41
PPP4R1-227ENST00000583988 NSD1Q96L73 2696 aaPredicted RBP0□□□□□ -2.41
PPP4R1-227ENST00000583988 CACFD1Q9UGQ2 172 aa0□□□□□ -2.41
PPP4R1-227ENST00000583988 ZFHX3Q15911 3703 aa-0□□□□□ -2.41
PPP4R1-227ENST00000583988 MLH3Q9UHC1 1453 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 ANKRD17O75179 2603 aaKnown RBP-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 A0A0G2JND7 137 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 C7orf77A4D0Y5 90 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 LOC730098B7Z3J9 87 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 MPC2O95563 127 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 UQCRHP07919 91 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 LINC00032P0C843 101 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 S100A10P60903 97 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 C14orf144Q96I85 54 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 PMCHL2Q9BQD1 86 aa-0.01□□□□□ -2.41
PPP4R1-227ENST00000583988 KIAA0556O60303 1618 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 PLEKHH2Q8IVE3 1493 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 FYCO1Q9BQS8 1478 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 TRBV25-1A0A075B6N4 114 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 A0A087WVE0 104 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 A0A1B0GU69 56 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 ATOX1O00244 68 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 RBP2P50120 134 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 LCN9Q8WX39 176 aa-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 FLNAP21333 2647 aaKnown RBP-0.02□□□□□ -2.41
PPP4R1-227ENST00000583988 ABCC2Q92887 1545 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 NLRP1Q9C000 1473 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 CNTLNQ9NXG0 1405 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 DNAJC13O75165 2243 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 ATP6V1G2-DDX39BF2Z307 99 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 SPRR2DP22532 72 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 GNGT1P63211 74 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 C6orf201Q7Z4U5 140 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 ACBD7Q8N6N7 88 aa-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 MAP1BP46821 2468 aaKnown RBP-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 PRDM15P57071 1507 aaPredicted RBP-0.03□□□□□ -2.41
PPP4R1-227ENST00000583988 EDC4Q6P2E9 1401 aaKnown RBP-0.04□□□□□ -2.42
PPP4R1-227ENST00000583988 H0Y9P7 68 aa-0.04□□□□□ -2.42
PPP4R1-227ENST00000583988 DEFB105AQ8NG35 78 aa-0.04□□□□□ -2.42
PPP4R1-227ENST00000583988 TRGV9Q99603 122 aa-0.04□□□□□ -2.42
PPP4R1-227ENST00000583988 WNK1Q9H4A3 2382 aa-0.04□□□□□ -2.42
PPP4R1-227ENST00000583988 RAPGEF2Q9Y4G8 1499 aa-0.04□□□□□ -2.42
PPP4R1-227ENST00000583988 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.04□□□□□ -2.42
PPP4R1-227ENST00000583988 COL4A6Q14031 1691 aa-0.05□□□□□ -2.42
PPP4R1-227ENST00000583988 ATRQ13535 2644 aa-0.05□□□□□ -2.42
PPP4R1-227ENST00000583988 SERP2Q8N6R1 65 aa-0.05□□□□□ -2.42
PPP4R1-227ENST00000583988 DPY30Q9C005 99 aa-0.05□□□□□ -2.42
PPP4R1-227ENST00000583988 CRIPTQ9P021 101 aa-0.05□□□□□ -2.42
PPP4R1-227ENST00000583988 NEBP20929 6669 aa-0.05□□□□□ -2.42
PPP4R1-227ENST00000583988 TEX14Q8IWB6 1497 aa-0.05□□□□□ -2.42
PPP4R1-227ENST00000583988 CHD8Q9HCK8 2581 aa-0.05□□□□□ -2.42
PPP4R1-227ENST00000583988 ANKRD36BQ8N2N9 1353 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 HMCN2Q8NDA2 5059 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 EP300Q09472 2414 aaPredicted RBP-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 KNDC1Q76NI1 1749 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 UQCRHLA0A096LP55 91 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 H7BZZ5 65 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 MT-ATP8P03928 68 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 PRM1P04553 51 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 ASIPP42127 132 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 COL5A1-AS1Q5SY13 56 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 ZNF720Q7Z2F6 126 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 DEFB107AQ8IZN7 70 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 APC2O95996 2303 aa-0.06□□□□□ -2.42
PPP4R1-227ENST00000583988 ANKRD36A6QL64 1941 aa-0.07□□□□□ -2.42
PPP4R1-227ENST00000583988 SHPRHQ149N8 1683 aa-0.07□□□□□ -2.42
PPP4R1-227ENST00000583988 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
PPP4R1-227ENST00000583988 I3L3M4 83 aa-0.07□□□□□ -2.42
PPP4R1-227ENST00000583988 HMGN3Q15651 99 aa-0.07□□□□□ -2.42
PPP4R1-227ENST00000583988 PAPPA2Q9BXP8 1791 aa-0.07□□□□□ -2.42
PPP4R1-227ENST00000583988 LRRC37AA6NMS7 1700 aa-0.07□□□□□ -2.42
PPP4R1-227ENST00000583988 FMN2Q9NZ56 1722 aa-0.07□□□□□ -2.42
PPP4R1-227ENST00000583988 TARBP1Q13395 1621 aaKnown RBP-0.08□□□□□ -2.42
PPP4R1-227ENST00000583988 CPSF4LA6NMK7 179 aaKnown RBP-0.08□□□□□ -2.42
PPP4R1-227ENST00000583988 M0R143 59 aa-0.08□□□□□ -2.42
PPP4R1-227ENST00000583988 ARMS2P0C7Q2 107 aa-0.08□□□□□ -2.42
PPP4R1-227ENST00000583988 ALKAL2Q6UX46 152 aa-0.08□□□□□ -2.42
PPP4R1-227ENST00000583988 MYCBP2O75592 4640 aa-0.08□□□□□ -2.42
PPP4R1-227ENST00000583988 MON2Q7Z3U7 1717 aa-0.09□□□□□ -2.42
PPP4R1-227ENST00000583988 FAUP35544 74 aaKnown RBP-0.09□□□□□ -2.42
PPP4R1-227ENST00000583988 KLK9Q2XQG4 91 aa-0.09□□□□□ -2.42
PPP4R1-227ENST00000583988 ETDBQ3ZM63 59 aa-0.09□□□□□ -2.42
PPP4R1-227ENST00000583988 APLNQ9ULZ1 77 aa-0.09□□□□□ -2.42
PPP4R1-227ENST00000583988 CLTCQ00610 1675 aaKnown RBP-0.09□□□□□ -2.42
PPP4R1-227ENST00000583988 KIAA1551Q9HCM1 1747 aa-0.1□□□□□ -2.42
PPP4R1-227ENST00000583988 BSNQ9UPA5 3926 aa-0.1□□□□□ -2.43
PPP4R1-227ENST00000583988 C5P01031 1676 aa-0.1□□□□□ -2.43
PPP4R1-227ENST00000583988 S100A8P05109 93 aa-0.1□□□□□ -2.43
PPP4R1-227ENST00000583988 LPAP08519 4548 aa-0.1□□□□□ -2.43
PPP4R1-227ENST00000583988 TNXBP22105 4242 aa-0.1□□□□□ -2.43
PPP4R1-227ENST00000583988 MARF1Q9Y4F3 1742 aaKnown RBP-0.1□□□□□ -2.43
PPP4R1-227ENST00000583988 KIF20BQ96Q89 1820 aa-0.1□□□□□ -2.43
PPP4R1-227ENST00000583988 VPS8Q8N3P4 1428 aa-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 COL14A1Q05707 1796 aaKnown RBP-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 ZANQ9Y493 2812 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 851.1 ms