RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TM2D3Q9BRN9 247 aa14.03□□□□□ -0.16
SMG8-203ENST00000578922 H3BT86 120 aa14.02□□□□□ -0.17
SMG8-203ENST00000578922 NTN5Q8WTR8 489 aaPredicted RBP14.02□□□□□ -0.17
SMG8-203ENST00000578922 COX6A2Q02221 97 aa14.01□□□□□ -0.17
SMG8-203ENST00000578922 C11orf45Q8TAV5 145 aa14.01□□□□□ -0.17
SMG8-203ENST00000578922 CDC42SE2Q9NRR3 84 aa14□□□□□ -0.17
SMG8-203ENST00000578922 HUWE1Q7Z6Z7 4374 aaKnown RBP14□□□□□ -0.17
SMG8-203ENST00000578922 LST1O00453 97 aa13.99□□□□□ -0.17
SMG8-203ENST00000578922 MRPL23Q16540 153 aaKnown RBP13.99□□□□□ -0.17
SMG8-203ENST00000578922 Q9H8V8 135 aa13.99□□□□□ -0.17
SMG8-203ENST00000578922 DNHD1Q96M86 4753 aa13.98□□□□□ -0.17
SMG8-203ENST00000578922 IGLV4-60A0A075B6I1 120 aa13.98□□□□□ -0.17
SMG8-203ENST00000578922 TRAV13-1A0A0B4J241 112 aa13.98□□□□□ -0.17
SMG8-203ENST00000578922 NPC2P61916 151 aa13.98□□□□□ -0.17
SMG8-203ENST00000578922 C2orf82Q6UX34 121 aa13.98□□□□□ -0.17
SMG8-203ENST00000578922 PPDPFQ9H3Y8 114 aa13.98□□□□□ -0.17
SMG8-203ENST00000578922 SMIM1B2RUZ4 78 aa13.98□□□□□ -0.17
SMG8-203ENST00000578922 LINC00308Q8TCZ7 52 aa13.98□□□□□ -0.17
SMG8-203ENST00000578922 IGKV3OR2-268A0A0C4DH90 116 aa13.97□□□□□ -0.17
SMG8-203ENST00000578922 H7C423 109 aa13.97□□□□□ -0.17
SMG8-203ENST00000578922 UBE2WQ96B02 151 aa13.97□□□□□ -0.17
SMG8-203ENST00000578922 HERV-K104P63124 156 aa13.96□□□□□ -0.17
SMG8-203ENST00000578922 DEFB131BA0A096LNP1 70 aa13.94□□□□□ -0.18
SMG8-203ENST00000578922 DAND5Q8N907 189 aa13.94□□□□□ -0.18
SMG8-203ENST00000578922 TEX49A0A1B0GTD5 131 aa13.93□□□□□ -0.18
SMG8-203ENST00000578922 ZNF625Q96I27 306 aaPredicted RBP13.93□□□□□ -0.18
SMG8-203ENST00000578922 TRAV8-4A0A0B4J246 113 aa13.92□□□□□ -0.18
SMG8-203ENST00000578922 Q8N3U1 123 aa13.92□□□□□ -0.18
SMG8-203ENST00000578922 CLEC2BQ92478 149 aa13.92□□□□□ -0.18
SMG8-203ENST00000578922 COL7A1Q02388 2944 aa13.91□□□□□ -0.18
SMG8-203ENST00000578922 SNCGO76070 127 aa13.89□□□□□ -0.19
SMG8-203ENST00000578922 CLPSL2Q6UWE3 100 aa13.89□□□□□ -0.19
SMG8-203ENST00000578922 MEIG1Q5JSS6 88 aa13.89□□□□□ -0.19
SMG8-203ENST00000578922 FAM240AA0A1B0GVK7 77 aa13.88□□□□□ -0.19
SMG8-203ENST00000578922 COX7A2LO14548 114 aa13.88□□□□□ -0.19
SMG8-203ENST00000578922 LYPD5Q6UWN5 251 aa13.88□□□□□ -0.19
SMG8-203ENST00000578922 DNAH9Q9NYC9 4486 aa13.88□□□□□ -0.19
SMG8-203ENST00000578922 LELP1Q5T871 98 aa13.87□□□□□ -0.19
SMG8-203ENST00000578922 Q6Q795 121 aa13.86□□□□□ -0.19
SMG8-203ENST00000578922 SOSTDC1Q6X4U4 206 aa13.86□□□□□ -0.19
SMG8-203ENST00000578922 H3BNG1 76 aa13.86□□□□□ -0.19
SMG8-203ENST00000578922 STAB2Q8WWQ8 2551 aa13.85□□□□□ -0.19
SMG8-203ENST00000578922 A0A1B0GUV1 79 aa13.85□□□□□ -0.19
SMG8-203ENST00000578922 GAGE2BQ13066 116 aa13.85□□□□□ -0.19
SMG8-203ENST00000578922 GAGE2EQ4V326 116 aa13.85□□□□□ -0.19
SMG8-203ENST00000578922 GAGE2DQ9UEU5 116 aa13.85□□□□□ -0.19
SMG8-203ENST00000578922 B9D2Q9BPU9 175 aa13.85□□□□□ -0.19
SMG8-203ENST00000578922 TRAV10A0A0B4J240 114 aa13.83□□□□□ -0.19
SMG8-203ENST00000578922 ANGP03950 147 aaKnown RBP13.83□□□□□ -0.19
SMG8-203ENST00000578922 SVIPQ8NHG7 77 aa13.83□□□□□ -0.19
SMG8-203ENST00000578922 A0A0U1RRA0 63 aa13.83□□□□□ -0.2
SMG8-203ENST00000578922 LINC00269Q8N2A0 174 aa13.83□□□□□ -0.2
SMG8-203ENST00000578922 LINC00959A0A1B0GUT2 108 aa13.82□□□□□ -0.2
SMG8-203ENST00000578922 TRACP01848 142 aa13.82□□□□□ -0.2
SMG8-203ENST00000578922 ANAPC13Q9BS18 74 aa13.81□□□□□ -0.2
SMG8-203ENST00000578922 TRAV13-2A0A0B4J235 113 aa13.81□□□□□ -0.2
SMG8-203ENST00000578922 ESRGQ1W209 222 aa13.81□□□□□ -0.2
SMG8-203ENST00000578922 COX7B2Q8TF08 81 aa13.81□□□□□ -0.2
SMG8-203ENST00000578922 C15orf53Q8NAA6 179 aa13.8□□□□□ -0.2
SMG8-203ENST00000578922 WFDC10BQ8IUB3 73 aa13.79□□□□□ -0.2
SMG8-203ENST00000578922 XCL1P47992 114 aa13.79□□□□□ -0.2
SMG8-203ENST00000578922 ACYP1P07311 99 aa13.78□□□□□ -0.2
SMG8-203ENST00000578922 MEGF8Q7Z7M0 2845 aa13.78□□□□□ -0.2
SMG8-203ENST00000578922 IGLV10-54A0A075B6I4 117 aa13.78□□□□□ -0.2
SMG8-203ENST00000578922 REG3AQ06141 175 aa13.77□□□□□ -0.21
SMG8-203ENST00000578922 C5orf38Q86SI9 138 aa13.77□□□□□ -0.21
SMG8-203ENST00000578922 SS18Q15532 418 aa13.76□□□□□ -0.21
SMG8-203ENST00000578922 KLK12Q9UKR0 248 aa13.76□□□□□ -0.21
SMG8-203ENST00000578922 IGHV3OR16-9A0A0B4J2B5 98 aa13.75□□□□□ -0.21
SMG8-203ENST00000578922 RPL28P46779 137 aaKnown RBP13.75□□□□□ -0.21
SMG8-203ENST00000578922 NDUFV3P56181 108 aaKnown RBP13.75□□□□□ -0.21
SMG8-203ENST00000578922 TTC32Q5I0X7 151 aa13.75□□□□□ -0.21
SMG8-203ENST00000578922 PRKDCP78527 4128 aaKnown RBP13.74□□□□□ -0.21
SMG8-203ENST00000578922 CRPP02741 224 aa13.74□□□□□ -0.21
SMG8-203ENST00000578922 A0A087WZ39 114 aa13.73□□□□□ -0.21
SMG8-203ENST00000578922 MIR7-3HGQ8N6C7 128 aa13.73□□□□□ -0.21
SMG8-203ENST00000578922 IBA57-AS1B1ANH7 110 aa13.73□□□□□ -0.21
SMG8-203ENST00000578922 CHCHD10Q8WYQ3 142 aaPredicted RBP13.72□□□□□ -0.21
SMG8-203ENST00000578922 SND1-IT1Q9HBX3 110 aa13.72□□□□□ -0.21
SMG8-203ENST00000578922 KRTAP21-3Q3LHN1 58 aa13.71□□□□□ -0.21
SMG8-203ENST00000578922 TOMM7Q9P0U1 55 aa13.71□□□□□ -0.21
SMG8-203ENST00000578922 BAALC-AS2P0C853 105 aa13.71□□□□□ -0.22
SMG8-203ENST00000578922 NHLRC4P0CG21 123 aaPredicted RBP13.7□□□□□ -0.22
SMG8-203ENST00000578922 LINC00158P58513 81 aa13.69□□□□□ -0.22
SMG8-203ENST00000578922 ENHOQ6UWT2 76 aa13.69□□□□□ -0.22
SMG8-203ENST00000578922 TRBV7-7A0A0K0K1E9 115 aa13.68□□□□□ -0.22
SMG8-203ENST00000578922 IGKV2-28A0A075B6P5 120 aa13.68□□□□□ -0.22
SMG8-203ENST00000578922 IGKV2D-28P01615 120 aa13.68□□□□□ -0.22
SMG8-203ENST00000578922 LINC00337Q8N6G1 96 aa13.68□□□□□ -0.22
SMG8-203ENST00000578922 FAM218AQ96MZ4 157 aa13.67□□□□□ -0.22
SMG8-203ENST00000578922 INAFM2P0DMQ5 153 aa13.66□□□□□ -0.22
SMG8-203ENST00000578922 PRR34Q9NV39 138 aa13.66□□□□□ -0.22
SMG8-203ENST00000578922 LINC00588Q9Y4M8 146 aa13.66□□□□□ -0.22
SMG8-203ENST00000578922 H0YGX0 51 aa13.66□□□□□ -0.22
SMG8-203ENST00000578922 CCL18P55774 89 aa13.66□□□□□ -0.22
SMG8-203ENST00000578922 CD164L2Q6UWJ8 174 aa13.66□□□□□ -0.22
SMG8-203ENST00000578922 IMUPQ9GZP8 106 aa13.66□□□□□ -0.22
SMG8-203ENST00000578922 LINC01561Q8N1V8 128 aa13.65□□□□□ -0.22
SMG8-203ENST00000578922 C22orf24Q9Y442 160 aa13.64□□□□□ -0.23
SMG8-203ENST00000578922 MALP21145 153 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms