RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 Q6ZR54 194 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 RMI2Q96E14 147 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 C1orf43Q9BWL3 253 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 GEMIN7Q9H840 131 aaKnown RBP8.64□□□□□ -1.03
SPG7-209ENST00000564047 Q9HAA7 133 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 ABCA13Q86UQ4 5058 aa8.63□□□□□ -1.03
SPG7-209ENST00000564047 GAGE10A6NGK3 116 aa8.63□□□□□ -1.03
SPG7-209ENST00000564047 H3BUT2 72 aa8.63□□□□□ -1.03
SPG7-209ENST00000564047 XCL1P47992 114 aa8.63□□□□□ -1.03
SPG7-209ENST00000564047 KRTAP26-1Q6PEX3 210 aa8.63□□□□□ -1.03
SPG7-209ENST00000564047 SCGB1D4Q6XE38 83 aa8.63□□□□□ -1.03
SPG7-209ENST00000564047 NHP2Q9NX24 153 aaKnown RBP8.63□□□□□ -1.03
SPG7-209ENST00000564047 PKHD1P08F94 4074 aa8.63□□□□□ -1.03
SPG7-209ENST00000564047 IGKV2D-24A0A075B6R9 120 aa8.62□□□□□ -1.03
SPG7-209ENST00000564047 IGLV5-45A0A087WSX0 123 aa8.62□□□□□ -1.03
SPG7-209ENST00000564047 IGHV3OR16-9A0A0B4J2B5 98 aa8.62□□□□□ -1.03
SPG7-209ENST00000564047 FABP2P12104 132 aa8.62□□□□□ -1.03
SPG7-209ENST00000564047 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
SPG7-209ENST00000564047 COX6A2Q02221 97 aa8.62□□□□□ -1.03
SPG7-209ENST00000564047 GAGE12HA6NDE8 117 aa8.61□□□□□ -1.03
SPG7-209ENST00000564047 M0R2N4 97 aa8.61□□□□□ -1.03
SPG7-209ENST00000564047 FOXI1Q12951 378 aa8.61□□□□□ -1.03
SPG7-209ENST00000564047 RAB37Q96AX2 223 aa8.61□□□□□ -1.03
SPG7-209ENST00000564047 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
SPG7-209ENST00000564047 CDKN2A-AS1Q9UH64 79 aa8.6□□□□□ -1.03
SPG7-209ENST00000564047 A0A087WZ39 114 aa8.59□□□□□ -1.03
SPG7-209ENST00000564047 COX7A2LO14548 114 aa8.59□□□□□ -1.03
SPG7-209ENST00000564047 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
SPG7-209ENST00000564047 SPCS1Q9Y6A9 102 aa8.59□□□□□ -1.03
SPG7-209ENST00000564047 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
SPG7-209ENST00000564047 K7ERJ3 54 aa8.58□□□□□ -1.04
SPG7-209ENST00000564047 C5orf38Q86SI9 138 aa8.58□□□□□ -1.04
SPG7-209ENST00000564047 C6orf223Q8N319 242 aa8.58□□□□□ -1.04
SPG7-209ENST00000564047 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
SPG7-209ENST00000564047 DNAH6Q9C0G6 4158 aa8.56□□□□□ -1.04
SPG7-209ENST00000564047 MALP21145 153 aa8.56□□□□□ -1.04
SPG7-209ENST00000564047 C1orf134Q5TEV5 83 aa8.56□□□□□ -1.04
SPG7-209ENST00000564047 Q6ZRN7 208 aaPredicted RBP8.56□□□□□ -1.04
SPG7-209ENST00000564047 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
SPG7-209ENST00000564047 PSCAO43653 123 aa8.55□□□□□ -1.04
SPG7-209ENST00000564047 APOMO95445 188 aa8.55□□□□□ -1.04
SPG7-209ENST00000564047 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
SPG7-209ENST00000564047 NAA38Q9BRA0 125 aaKnown RBP8.55□□□□□ -1.04
SPG7-209ENST00000564047 FAT2Q9NYQ8 4349 aa8.55□□□□□ -1.04
SPG7-209ENST00000564047 DNAH2Q9P225 4427 aa8.54□□□□□ -1.04
SPG7-209ENST00000564047 IGHV3-64A0A075B6Q5 118 aa8.54□□□□□ -1.04
SPG7-209ENST00000564047 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
SPG7-209ENST00000564047 TIMM17BO60830 172 aa8.54□□□□□ -1.04
SPG7-209ENST00000564047 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
SPG7-209ENST00000564047 A0A0J9YXY3 114 aa8.53□□□□□ -1.04
SPG7-209ENST00000564047 LYRM7Q5U5X0 104 aa8.53□□□□□ -1.04
SPG7-209ENST00000564047 SPANXDQ9BXN6 97 aa8.53□□□□□ -1.04
SPG7-209ENST00000564047 SPANXCQ9NY87 97 aa8.53□□□□□ -1.04
SPG7-209ENST00000564047 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
SPG7-209ENST00000564047 RPL24P83731 157 aaKnown RBP8.52□□□□□ -1.05
SPG7-209ENST00000564047 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
SPG7-209ENST00000564047 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.51□□□□□ -1.05
SPG7-209ENST00000564047 A0A0B4J2C4 111 aa8.51□□□□□ -1.05
SPG7-209ENST00000564047 USP17L23D6RBM5 183 aa8.51□□□□□ -1.05
SPG7-209ENST00000564047 C15orf56Q8N910 161 aa8.51□□□□□ -1.05
SPG7-209ENST00000564047 DNAH11Q96DT5 4516 aa8.51□□□□□ -1.05
SPG7-209ENST00000564047 GVQW2A0A096LPI5 108 aaPredicted RBP8.5□□□□□ -1.05
SPG7-209ENST00000564047 NDUFA1O15239 70 aa8.5□□□□□ -1.05
SPG7-209ENST00000564047 CFC1BP0CG36 223 aa8.5□□□□□ -1.05
SPG7-209ENST00000564047 CFC1P0CG37 223 aa8.5□□□□□ -1.05
SPG7-209ENST00000564047 Q8IZM0 81 aa8.5□□□□□ -1.05
SPG7-209ENST00000564047 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
SPG7-209ENST00000564047 LITAFQ99732 161 aa8.5□□□□□ -1.05
SPG7-209ENST00000564047 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
SPG7-209ENST00000564047 DNAH17Q9UFH2 4485 aa8.5□□□□□ -1.05
SPG7-209ENST00000564047 LRCOL1A6NCL2 159 aa8.49□□□□□ -1.05
SPG7-209ENST00000564047 TSPAN13O95857 204 aa8.49□□□□□ -1.05
SPG7-209ENST00000564047 PRSS2P07478 247 aa8.49□□□□□ -1.05
SPG7-209ENST00000564047 IFITM1P13164 125 aa8.49□□□□□ -1.05
SPG7-209ENST00000564047 SPAG11BQ08648 103 aa8.49□□□□□ -1.05
SPG7-209ENST00000564047 KIAA0087Q14695 138 aa8.49□□□□□ -1.05
SPG7-209ENST00000564047 OCIAD2Q56VL3 154 aa8.49□□□□□ -1.05
SPG7-209ENST00000564047 TOMM7Q9P0U1 55 aa8.49□□□□□ -1.05
SPG7-209ENST00000564047 F8W1H4 67 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 K7ERU9 68 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 RTL8CO15255 209 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 WFDC2Q14508 124 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 C14orf177Q52M58 125 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 MUSTN1Q8IVN3 82 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 PRO1854Q9UHT4 67 aa8.48□□□□□ -1.05
SPG7-209ENST00000564047 A4D1N5 150 aa8.47□□□□□ -1.05
SPG7-209ENST00000564047 F8WDY8 70 aa8.47□□□□□ -1.05
SPG7-209ENST00000564047 LECT2O14960 151 aa8.47□□□□□ -1.05
SPG7-209ENST00000564047 CXCL5P42830 114 aa8.47□□□□□ -1.05
SPG7-209ENST00000564047 NTN5Q8WTR8 489 aaPredicted RBP8.47□□□□□ -1.05
SPG7-209ENST00000564047 C2orf48Q96LS8 159 aa8.47□□□□□ -1.05
SPG7-209ENST00000564047 PPDPFQ9H3Y8 114 aa8.47□□□□□ -1.05
SPG7-209ENST00000564047 PKD1P98161 4303 aa8.46□□□□□ -1.05
SPG7-209ENST00000564047 A0A087WTM6 91 aa8.46□□□□□ -1.06
SPG7-209ENST00000564047 SFTA2Q6UW10 78 aa8.46□□□□□ -1.06
SPG7-209ENST00000564047 COPS9Q8WXC6 57 aa8.46□□□□□ -1.06
SPG7-209ENST00000564047 HERC1Q15751 4861 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms