RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 IGKV3OR2-268A0A0C4DH90 116 aa3.68□□□□□ -1.82
HMGN2P47-201ENST00000559378 A0A1W2PNU3 283 aaPredicted RBP3.68□□□□□ -1.82
HMGN2P47-201ENST00000559378 ZNF861PO60384 105 aa3.68□□□□□ -1.82
HMGN2P47-201ENST00000559378 GIG44P09565 113 aaPredicted RBP3.68□□□□□ -1.82
HMGN2P47-201ENST00000559378 SDK1Q7Z5N4 2213 aa3.68□□□□□ -1.82
HMGN2P47-201ENST00000559378 ALPK2Q86TB3 2170 aa3.68□□□□□ -1.82
HMGN2P47-201ENST00000559378 ABCA4P78363 2273 aa3.67□□□□□ -1.82
HMGN2P47-201ENST00000559378 IGKV4-1P06312 121 aa3.67□□□□□ -1.82
HMGN2P47-201ENST00000559378 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
HMGN2P47-201ENST00000559378 KCNQ1DNQ9H478 68 aa3.67□□□□□ -1.82
HMGN2P47-201ENST00000559378 TRGV2A0A075B6R0 118 aa3.66□□□□□ -1.82
HMGN2P47-201ENST00000559378 IGKV2-29A2NJV5 120 aaPredicted RBP3.66□□□□□ -1.82
HMGN2P47-201ENST00000559378 LINC00308Q8TCZ7 52 aa3.66□□□□□ -1.82
HMGN2P47-201ENST00000559378 SHANK1Q9Y566 2161 aa3.65□□□□□ -1.82
HMGN2P47-201ENST00000559378 IGLV4-60A0A075B6I1 120 aa3.65□□□□□ -1.83
HMGN2P47-201ENST00000559378 LINC00959A0A1B0GUT2 108 aa3.65□□□□□ -1.83
HMGN2P47-201ENST00000559378 ZFHX3Q15911 3703 aa3.64□□□□□ -1.83
HMGN2P47-201ENST00000559378 CUL9Q8IWT3 2517 aa3.64□□□□□ -1.83
HMGN2P47-201ENST00000559378 A0A087WYN8 130 aa3.64□□□□□ -1.83
HMGN2P47-201ENST00000559378 MRGPRG-AS1Q2M3A8 158 aa3.64□□□□□ -1.83
HMGN2P47-201ENST00000559378 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
HMGN2P47-201ENST00000559378 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
HMGN2P47-201ENST00000559378 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
HMGN2P47-201ENST00000559378 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
HMGN2P47-201ENST00000559378 NDUFA1O15239 70 aa3.63□□□□□ -1.83
HMGN2P47-201ENST00000559378 SPINK14Q6IE38 97 aa3.63□□□□□ -1.83
HMGN2P47-201ENST00000559378 PATE1Q8WXA2 126 aa3.63□□□□□ -1.83
HMGN2P47-201ENST00000559378 COL4A4P53420 1690 aaPredicted RBP3.62□□□□□ -1.83
HMGN2P47-201ENST00000559378 MRPS21P82921 87 aaKnown RBP3.62□□□□□ -1.83
HMGN2P47-201ENST00000559378 COX17Q14061 63 aa3.62□□□□□ -1.83
HMGN2P47-201ENST00000559378 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
HMGN2P47-201ENST00000559378 C4orf3Q8WVX3 66 aa3.62□□□□□ -1.83
HMGN2P47-201ENST00000559378 RP1P56715 2156 aa3.61□□□□□ -1.83
HMGN2P47-201ENST00000559378 A0A087WTM6 91 aa3.61□□□□□ -1.83
HMGN2P47-201ENST00000559378 A0A1W2PPR1 153 aa3.61□□□□□ -1.83
HMGN2P47-201ENST00000559378 CCL22O00626 93 aa3.61□□□□□ -1.83
HMGN2P47-201ENST00000559378 IGLV3-1P01715 115 aa3.61□□□□□ -1.83
HMGN2P47-201ENST00000559378 DEFB116Q30KQ4 102 aa3.61□□□□□ -1.83
HMGN2P47-201ENST00000559378 Q6ZTI0 123 aa3.61□□□□□ -1.83
HMGN2P47-201ENST00000559378 ST20-AS1Q8NBB2 130 aa3.61□□□□□ -1.83
HMGN2P47-201ENST00000559378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.6□□□□□ -1.83
HMGN2P47-201ENST00000559378 COX7BP24311 80 aa3.6□□□□□ -1.83
HMGN2P47-201ENST00000559378 UNC13CQ8NB66 2214 aa3.59□□□□□ -1.83
HMGN2P47-201ENST00000559378 TRBV6-4A0A1B0GX49 114 aa3.59□□□□□ -1.83
HMGN2P47-201ENST00000559378 COL4A5P29400 1685 aa3.59□□□□□ -1.84
HMGN2P47-201ENST00000559378 GAS8-AS1O95177 125 aa3.58□□□□□ -1.84
HMGN2P47-201ENST00000559378 PRB2P02812 416 aaPredicted RBP3.58□□□□□ -1.84
HMGN2P47-201ENST00000559378 RPS27P42677 84 aaKnown RBP3.58□□□□□ -1.84
HMGN2P47-201ENST00000559378 CRIP1P50238 77 aa3.58□□□□□ -1.84
HMGN2P47-201ENST00000559378 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
HMGN2P47-201ENST00000559378 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
HMGN2P47-201ENST00000559378 SEC16AO15027 2179 aa3.57□□□□□ -1.84
HMGN2P47-201ENST00000559378 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
HMGN2P47-201ENST00000559378 SMIM11BQ8TCY0 68 aa3.57□□□□□ -1.84
HMGN2P47-201ENST00000559378 TRGV1A0A0A0MS02 117 aa3.56□□□□□ -1.84
HMGN2P47-201ENST00000559378 A0A1B0GU69 56 aa3.56□□□□□ -1.84
HMGN2P47-201ENST00000559378 DEFB132Q7Z7B7 95 aa3.56□□□□□ -1.84
HMGN2P47-201ENST00000559378 LINC00612Q8N6U2 182 aa3.56□□□□□ -1.84
HMGN2P47-201ENST00000559378 COL27A1Q8IZC6 1860 aaPredicted RBP3.56□□□□□ -1.84
HMGN2P47-201ENST00000559378 CACNA1CQ13936 2221 aa3.55□□□□□ -1.84
HMGN2P47-201ENST00000559378 NBDYA0A0U1RRE5 68 aa3.55□□□□□ -1.84
HMGN2P47-201ENST00000559378 SLPIP03973 132 aa3.55□□□□□ -1.84
HMGN2P47-201ENST00000559378 PRB1P04280 392 aa3.55□□□□□ -1.84
HMGN2P47-201ENST00000559378 DEFB106AQ8N104 65 aa3.55□□□□□ -1.84
HMGN2P47-201ENST00000559378 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
HMGN2P47-201ENST00000559378 PLA2G2AP14555 144 aa3.54□□□□□ -1.84
HMGN2P47-201ENST00000559378 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
HMGN2P47-201ENST00000559378 MRPL33O75394 65 aaKnown RBP3.53□□□□□ -1.84
HMGN2P47-201ENST00000559378 LINC00158P58513 81 aa3.53□□□□□ -1.84
HMGN2P47-201ENST00000559378 RPL37AP61513 92 aaKnown RBP3.53□□□□□ -1.84
HMGN2P47-201ENST00000559378 SPINK9Q5DT21 86 aa3.53□□□□□ -1.84
HMGN2P47-201ENST00000559378 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
HMGN2P47-201ENST00000559378 KNTC1P50748 2209 aa3.53□□□□□ -1.84
HMGN2P47-201ENST00000559378 PDE4DIPQ5VU43 2346 aa3.53□□□□□ -1.84
HMGN2P47-201ENST00000559378 COL4A2P08572 1712 aa3.53□□□□□ -1.85
HMGN2P47-201ENST00000559378 PIGYQ3MUY2 71 aa3.52□□□□□ -1.85
HMGN2P47-201ENST00000559378 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
HMGN2P47-201ENST00000559378 MED13LQ71F56 2210 aa3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 DEFB131BA0A096LNP1 70 aa3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 A0A0J9YWU9 116 aa3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 FAM168BA1KXE4 195 aa3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 C5orf56Q8N8D9 126 aa3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 Q96NJ1 140 aa3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 PSORS1C2Q9UIG4 136 aa3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 KMT2BQ9UMN6 2715 aaPredicted RBP3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 CADP27708 2225 aa3.51□□□□□ -1.85
HMGN2P47-201ENST00000559378 F5P12259 2224 aa3.5□□□□□ -1.85
HMGN2P47-201ENST00000559378 A0A1W2PNN7 141 aa3.5□□□□□ -1.85
HMGN2P47-201ENST00000559378 POLR2KP53803 58 aaKnown RBP3.5□□□□□ -1.85
HMGN2P47-201ENST00000559378 TYMSOSQ8TAI1 123 aa3.5□□□□□ -1.85
HMGN2P47-201ENST00000559378 IGFL4Q6B9Z1 124 aa3.49□□□□□ -1.85
HMGN2P47-201ENST00000559378 Q6ZQY7 126 aa3.49□□□□□ -1.85
HMGN2P47-201ENST00000559378 IGKV2-28A0A075B6P5 120 aa3.48□□□□□ -1.85
HMGN2P47-201ENST00000559378 M0R2N4 97 aa3.48□□□□□ -1.85
HMGN2P47-201ENST00000559378 IGKV2D-28P01615 120 aa3.48□□□□□ -1.85
HMGN2P47-201ENST00000559378 PRCDQ00LT1 54 aa3.48□□□□□ -1.85
HMGN2P47-201ENST00000559378 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
HMGN2P47-201ENST00000559378 RPL39P62891 51 aaKnown RBP3.46□□□□□ -1.86
HMGN2P47-201ENST00000559378 PRB3Q04118 309 aaPredicted RBP3.46□□□□□ -1.86
HMGN2P47-201ENST00000559378 Q8N9L7 120 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms