RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 HSBP1O75506 76 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 P01737 135 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 HBBP68871 147 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 COX6A2Q02221 97 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 MAJINQ3KP22 176 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 LINC00269Q8N2A0 174 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 GATD1Q8NB37 220 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 NUP35Q8NFH5 326 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 C18orf32Q8TCD1 76 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 CHCHD5Q9BSY4 110 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 ST20Q9HBF5 79 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 PSORS1C2Q9UIG4 136 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 PSG8Q9UQ74 426 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 LAMTOR2Q9Y2Q5 125 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 IGLV10-54A0A075B6I4 117 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 TRAV26-2A0A0B4J265 109 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 IGKV3D-20A0A0C4DH25 116 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 C19orf71A6NCJ1 209 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 LTAP01374 205 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 C3orf79P0CE67 100 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 ZNF25P17030 456 aaPredicted RBP2.96□□□□□ -1.94
ATXN3-239ENST00000556315 KRTDAPP60985 99 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 RBX1P62877 108 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 RIGQ13278 110 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 SPATA45Q537H7 98 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 TMEM97Q5BJF2 176 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 SAPCD1Q5SSQ6 148 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 FAM74A4Q5TZK3 123 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 Q8NBF4 154 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 TMEM191AQ9H0A3 160 aa2.96□□□□□ -1.94
ATXN3-239ENST00000556315 RNASE7Q9H1E1 156 aaKnown RBP2.96□□□□□ -1.94
ATXN3-239ENST00000556315 RPP21Q9H633 154 aaKnown RBP2.96□□□□□ -1.94
ATXN3-239ENST00000556315 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 MUC21A0A0G2JKD1 596 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 FABP5P3A8MUU1 101 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 HIGD1CA8MV81 97 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 TCRAP04437 139 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 ARMS2P0C7Q2 107 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 GNG5P63218 68 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 REG3AQ06141 175 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 MRPL54Q6P161 138 aaKnown RBP2.95□□□□□ -1.94
ATXN3-239ENST00000556315 CLPSL2Q6UWE3 100 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 Q6ZN92 141 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 Q6ZVQ6 151 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 PRNTQ86SH4 94 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 LINC00474Q9P2X8 69 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 PHLDA3Q9Y5J5 127 aa2.95□□□□□ -1.94
ATXN3-239ENST00000556315 A0A1B0GUT8 65 aa2.94□□□□□ -1.94
ATXN3-239ENST00000556315 H3BVH4 76 aa2.94□□□□□ -1.94
ATXN3-239ENST00000556315 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
ATXN3-239ENST00000556315 PRR4Q16378 134 aa2.94□□□□□ -1.94
ATXN3-239ENST00000556315 NTM-AS1Q6ZSK4 140 aa2.94□□□□□ -1.94
ATXN3-239ENST00000556315 OR10AG1Q8NH19 301 aa2.94□□□□□ -1.94
ATXN3-239ENST00000556315 PKIGQ9Y2B9 76 aa2.94□□□□□ -1.94
ATXN3-239ENST00000556315 TRBV25-1A0A075B6N4 114 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 KRTAP16-1A8MUX0 517 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 F2Z2F3 143 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 SYS1-DBNDD2H3BUS1 97 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 M0R381 172 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 PPBPP02775 128 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 NTF3P20783 257 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 CACNG7P62955 275 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 SEC11AP67812 179 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 RNASEKQ6P5S7 137 aaKnown RBP2.93□□□□□ -1.94
ATXN3-239ENST00000556315 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 Q86TA4 180 aa2.93□□□□□ -1.94
ATXN3-239ENST00000556315 A0A096LNI7 61 aa2.92□□□□□ -1.94
ATXN3-239ENST00000556315 IGHV1-24A0A0C4DH33 117 aa2.92□□□□□ -1.94
ATXN3-239ENST00000556315 G0S2P27469 103 aa2.92□□□□□ -1.94
ATXN3-239ENST00000556315 CRIP1P50238 77 aa2.92□□□□□ -1.94
ATXN3-239ENST00000556315 FAM19A2Q8N3H0 131 aa2.92□□□□□ -1.94
ATXN3-239ENST00000556315 C20orf203Q8NBC4 194 aa2.92□□□□□ -1.94
ATXN3-239ENST00000556315 CRCT1Q9UGL9 99 aa2.92□□□□□ -1.94
ATXN3-239ENST00000556315 IGLV4-60A0A075B6I1 120 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 IGLV1-50A0A075B6I6 118 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 IGLV4-3A0A075B6K6 122 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 A6NDN8 102 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 LINC01546A6NGU7 62 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 COX8AP10176 69 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 ZNF56Q15929 161 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 BATFQ16520 125 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 HIGD2BQ4VC39 106 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 FAM104BQ5XKR9 115 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 CD164L2Q6UWJ8 174 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 FA2HQ7L5A8 372 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 ORMDL3Q8N138 153 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 C15orf56Q8N910 161 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 FER1L6-AS1Q8NA97 138 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 DIRC1Q969H9 104 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 PGLYRP4Q96LB8 373 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 CNFNQ9BYD5 112 aa2.91□□□□□ -1.94
ATXN3-239ENST00000556315 TMSB15BA0A087X1C1 80 aa2.9□□□□□ -1.95
ATXN3-239ENST00000556315 GVQW2A0A096LPI5 108 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-239ENST00000556315 LINC01549A6NIU2 74 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms