RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ANKRD17O75179 2603 aaKnown RBP10.98□□□□□ -0.65
SYNE3-203ENST00000554873 LY6G6DO95868 133 aa10.98□□□□□ -0.65
SYNE3-203ENST00000554873 MYO9AB2RTY4 2548 aa10.97□□□□□ -0.65
SYNE3-203ENST00000554873 PAX4O43316 350 aa10.97□□□□□ -0.65
SYNE3-203ENST00000554873 CDC42SE2Q9NRR3 84 aa10.96□□□□□ -0.66
SYNE3-203ENST00000554873 TRBV6-4A0A1B0GX49 114 aa10.95□□□□□ -0.66
SYNE3-203ENST00000554873 LINC01547P58512 204 aaPredicted RBP10.95□□□□□ -0.66
SYNE3-203ENST00000554873 Q8N814 137 aa10.95□□□□□ -0.66
SYNE3-203ENST00000554873 Q6ZTI0 123 aa10.95□□□□□ -0.66
SYNE3-203ENST00000554873 CENPEQ02224 2701 aa10.95□□□□□ -0.66
SYNE3-203ENST00000554873 IBA57-AS1B1ANH7 110 aa10.94□□□□□ -0.66
SYNE3-203ENST00000554873 FSHBP01225 129 aa10.94□□□□□ -0.66
SYNE3-203ENST00000554873 MYO18BQ8IUG5 2567 aa10.94□□□□□ -0.66
SYNE3-203ENST00000554873 INSP01308 110 aa10.94□□□□□ -0.66
SYNE3-203ENST00000554873 MIFP14174 115 aa10.94□□□□□ -0.66
SYNE3-203ENST00000554873 TOMM7Q9P0U1 55 aa10.94□□□□□ -0.66
SYNE3-203ENST00000554873 ACACBO00763 2458 aa10.93□□□□□ -0.66
SYNE3-203ENST00000554873 DEFB114Q30KQ6 69 aa10.93□□□□□ -0.66
SYNE3-203ENST00000554873 MPLKIPQ8TAP9 179 aa10.93□□□□□ -0.66
SYNE3-203ENST00000554873 TRBV7-4A0A0J9YYF1 115 aa10.93□□□□□ -0.66
SYNE3-203ENST00000554873 DYNLRB2Q8TF09 96 aa10.93□□□□□ -0.66
SYNE3-203ENST00000554873 C2CD3Q4AC94 2353 aa10.92□□□□□ -0.66
SYNE3-203ENST00000554873 K7EQD1 137 aa10.92□□□□□ -0.66
SYNE3-203ENST00000554873 FBN2P35556 2912 aa10.91□□□□□ -0.66
SYNE3-203ENST00000554873 HAMPP81172 84 aa10.91□□□□□ -0.66
SYNE3-203ENST00000554873 FAM229BQ4G0N7 80 aa10.91□□□□□ -0.66
SYNE3-203ENST00000554873 KHDC1LQ5JSQ8 128 aa10.91□□□□□ -0.66
SYNE3-203ENST00000554873 Q6ZQT0 140 aa10.91□□□□□ -0.66
SYNE3-203ENST00000554873 NOTCH3Q9UM47 2321 aa10.91□□□□□ -0.66
SYNE3-203ENST00000554873 TEX15Q9BXT5 2789 aa10.91□□□□□ -0.66
SYNE3-203ENST00000554873 IGSF10Q6WRI0 2623 aa10.91□□□□□ -0.66
SYNE3-203ENST00000554873 CXCL6P80162 114 aa10.9□□□□□ -0.66
SYNE3-203ENST00000554873 C4orf3Q8WVX3 66 aa10.9□□□□□ -0.66
SYNE3-203ENST00000554873 TM2D3Q9BRN9 247 aa10.9□□□□□ -0.66
SYNE3-203ENST00000554873 FAM208BQ5VWN6 2430 aa10.9□□□□□ -0.67
SYNE3-203ENST00000554873 WNK1Q9H4A3 2382 aa10.9□□□□□ -0.67
SYNE3-203ENST00000554873 TRGV1A0A0A0MS02 117 aa10.9□□□□□ -0.67
SYNE3-203ENST00000554873 IGHV4-31P0DP07 118 aa10.9□□□□□ -0.67
SYNE3-203ENST00000554873 NTM-AS1Q6ZSK4 140 aa10.9□□□□□ -0.67
SYNE3-203ENST00000554873 Q6ZVQ6 151 aa10.9□□□□□ -0.67
SYNE3-203ENST00000554873 C1orf158Q8N1D5 194 aa10.9□□□□□ -0.67
SYNE3-203ENST00000554873 CACNA1AO00555 2505 aa10.89□□□□□ -0.67
SYNE3-203ENST00000554873 LOC110117498A0A087WWA1 95 aa10.89□□□□□ -0.67
SYNE3-203ENST00000554873 CHD6Q8TD26 2715 aa10.89□□□□□ -0.67
SYNE3-203ENST00000554873 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
SYNE3-203ENST00000554873 Q8N3U1 123 aa10.88□□□□□ -0.67
SYNE3-203ENST00000554873 PTPN13Q12923 2485 aa10.87□□□□□ -0.67
SYNE3-203ENST00000554873 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
SYNE3-203ENST00000554873 PMAIP1Q13794 54 aa10.87□□□□□ -0.67
SYNE3-203ENST00000554873 IL17DQ8TAD2 202 aa10.86□□□□□ -0.67
SYNE3-203ENST00000554873 CR1P17927 2039 aa10.86□□□□□ -0.67
SYNE3-203ENST00000554873 CUBNO60494 3623 aa10.86□□□□□ -0.67
SYNE3-203ENST00000554873 ESRGQ1W209 222 aa10.86□□□□□ -0.67
SYNE3-203ENST00000554873 TMEM254Q8TBM7 123 aa10.86□□□□□ -0.67
SYNE3-203ENST00000554873 PLAC8L1A1L4L8 177 aa10.85□□□□□ -0.67
SYNE3-203ENST00000554873 PRR15Q8IV56 129 aa10.85□□□□□ -0.67
SYNE3-203ENST00000554873 ERC2-IT1O76042 136 aa10.85□□□□□ -0.67
SYNE3-203ENST00000554873 STHQ8IWL8 128 aa10.85□□□□□ -0.67
SYNE3-203ENST00000554873 TLN2Q9Y4G6 2542 aa10.85□□□□□ -0.67
SYNE3-203ENST00000554873 NANOS2P60321 138 aaKnown RBP10.85□□□□□ -0.67
SYNE3-203ENST00000554873 NREPQ16612 68 aa10.85□□□□□ -0.67
SYNE3-203ENST00000554873 TRBV10-1A0A0K0K1A3 114 aa10.84□□□□□ -0.67
SYNE3-203ENST00000554873 UBE2L6O14933 153 aa10.84□□□□□ -0.67
SYNE3-203ENST00000554873 LAMTOR3Q9UHA4 124 aa10.83□□□□□ -0.68
SYNE3-203ENST00000554873 NAV2Q8IVL1 2488 aa10.83□□□□□ -0.68
SYNE3-203ENST00000554873 ZNF561-AS1K7EIQ3 104 aa10.83□□□□□ -0.68
SYNE3-203ENST00000554873 M0R2N4 97 aa10.83□□□□□ -0.68
SYNE3-203ENST00000554873 C6orf226Q5I0X4 101 aa10.83□□□□□ -0.68
SYNE3-203ENST00000554873 ABCA12Q86UK0 2595 aa10.83□□□□□ -0.68
SYNE3-203ENST00000554873 LRRK2Q5S007 2527 aa10.82□□□□□ -0.68
SYNE3-203ENST00000554873 EPG5Q9HCE0 2579 aa10.82□□□□□ -0.68
SYNE3-203ENST00000554873 AKAP9Q99996 3911 aa10.82□□□□□ -0.68
SYNE3-203ENST00000554873 C6orf223Q8N319 242 aa10.82□□□□□ -0.68
SYNE3-203ENST00000554873 Q6ZRU5 148 aa10.81□□□□□ -0.68
SYNE3-203ENST00000554873 C11orf68Q9H3H3 251 aaKnown RBP10.8□□□□□ -0.68
SYNE3-203ENST00000554873 IGHV3OR16-9A0A0B4J2B5 98 aa10.8□□□□□ -0.68
SYNE3-203ENST00000554873 KRTAP10-9P60411 292 aa10.8□□□□□ -0.68
SYNE3-203ENST00000554873 C11orf44Q8N8P7 122 aa10.8□□□□□ -0.68
SYNE3-203ENST00000554873 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
SYNE3-203ENST00000554873 A0A1W2PRX2 142 aa10.8□□□□□ -0.68
SYNE3-203ENST00000554873 PDE6GP18545 87 aa10.79□□□□□ -0.68
SYNE3-203ENST00000554873 SONP18583 2426 aaKnown RBP10.79□□□□□ -0.68
SYNE3-203ENST00000554873 A0A087WZ39 114 aa10.79□□□□□ -0.68
SYNE3-203ENST00000554873 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.68
SYNE3-203ENST00000554873 JMJD1CQ15652 2540 aa10.79□□□□□ -0.68
SYNE3-203ENST00000554873 PRYO14603 147 aa10.78□□□□□ -0.68
SYNE3-203ENST00000554873 NF1P21359 2839 aa10.78□□□□□ -0.68
SYNE3-203ENST00000554873 IGKV3OR2-268A0A0C4DH90 116 aa10.78□□□□□ -0.68
SYNE3-203ENST00000554873 BPY2O14599 106 aa10.78□□□□□ -0.68
SYNE3-203ENST00000554873 ZFYVE26Q68DK2 2539 aa10.78□□□□□ -0.68
SYNE3-203ENST00000554873 C9orf66Q5T8R8 295 aa10.77□□□□□ -0.68
SYNE3-203ENST00000554873 ZNF843Q8N446 348 aa10.77□□□□□ -0.68
SYNE3-203ENST00000554873 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.69
SYNE3-203ENST00000554873 LINC00575Q6W349 94 aa10.77□□□□□ -0.69
SYNE3-203ENST00000554873 Q6ZTC4 211 aa10.76□□□□□ -0.69
SYNE3-203ENST00000554873 GIG44P09565 113 aaPredicted RBP10.76□□□□□ -0.69
SYNE3-203ENST00000554873 PRR3P79522 188 aaKnown RBP10.76□□□□□ -0.69
SYNE3-203ENST00000554873 ZNF469Q96JG9 3925 aaPredicted RBP10.76□□□□□ -0.69
SYNE3-203ENST00000554873 ZNF462Q96JM2 2506 aa10.75□□□□□ -0.69
SYNE3-203ENST00000554873 SETD2Q9BYW2 2564 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms