RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 RYR2Q92736 4967 aa0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 AHCTF1Q8WYP5 2266 aa0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 FLNBO75369 2602 aaKnown RBP0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 SPTBN4Q9H254 2564 aa0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 EPG5Q9HCE0 2579 aa0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 CCDC168Q8NDH2 2452 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 RAPGEF2Q9Y4G8 1499 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 C2CD3Q4AC94 2353 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 UQCRHP07919 91 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 Q5BKY6 102 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 PSMG4Q5JS54 123 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 Q8IZM0 81 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 DOPEY1Q5JWR5 2465 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 NBEAL2Q6ZNJ1 2754 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 TTC37Q6PGP7 1564 aa0.48□□□□□ -2.33
LSM6P2-201ENST00000552208 ITPR3Q14573 2671 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 KMT2DO14686 5537 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 PAPPAQ13219 1627 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 LINC00959A0A1B0GUT2 108 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 FDCSPQ8NFU4 85 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 LRRK2Q5S007 2527 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 SMARCA2P51531 1590 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 PIEZO2Q9H5I5 2752 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 MYO7BQ6PIF6 2116 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 AKAP12Q02952 1782 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 SRCAPQ6ZRS2 3230 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 NUP188Q5SRE5 1749 aa0.47□□□□□ -2.33
LSM6P2-201ENST00000552208 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 PDZD2O15018 2839 aa0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 FAUP35544 74 aaKnown RBP0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 DEFB123Q8N688 67 aa0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 EPRSP07814 1512 aaKnown RBP0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 TNRC18O15417 2968 aaPredicted RBP0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 NLRP1Q9C000 1473 aa0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 WDFY4Q6ZS81 3184 aa0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 ANKRD11Q6UB99 2663 aaPredicted RBP0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 KMT2CQ8NEZ4 4911 aaKnown RBP0.46□□□□□ -2.34
LSM6P2-201ENST00000552208 RYR1P21817 5038 aa0.45□□□□□ -2.34
LSM6P2-201ENST00000552208 FANCAO15360 1455 aa0.45□□□□□ -2.34
LSM6P2-201ENST00000552208 POLA1P09884 1462 aaPredicted RBP0.45□□□□□ -2.34
LSM6P2-201ENST00000552208 SSPOA2VEC9 5147 aa0.45□□□□□ -2.34
LSM6P2-201ENST00000552208 UQCRHLA0A096LP55 91 aa0.44□□□□□ -2.34
LSM6P2-201ENST00000552208 TRBV7-4A0A0J9YYF1 115 aa0.44□□□□□ -2.34
LSM6P2-201ENST00000552208 IGSF10Q6WRI0 2623 aa0.44□□□□□ -2.34
LSM6P2-201ENST00000552208 ABCC2Q92887 1545 aa0.43□□□□□ -2.34
LSM6P2-201ENST00000552208 NSD1Q96L73 2696 aaPredicted RBP0.43□□□□□ -2.34
LSM6P2-201ENST00000552208 FLNAP21333 2647 aaKnown RBP0.43□□□□□ -2.34
LSM6P2-201ENST00000552208 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
LSM6P2-201ENST00000552208 PIGYQ3MUY2 71 aa0.43□□□□□ -2.34
LSM6P2-201ENST00000552208 C20orf78Q9BR46 151 aa0.43□□□□□ -2.34
LSM6P2-201ENST00000552208 XRN1Q8IZH2 1706 aaKnown RBP0.43□□□□□ -2.34
LSM6P2-201ENST00000552208 ZANQ9Y493 2812 aa0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 GOLGA4Q13439 2230 aaKnown RBP0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 CEP162Q5TB80 1403 aa0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 GYPAP02724 150 aa0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 ARMS2P0C7Q2 107 aa0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 HIGD1BQ9P298 99 aa0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 HUWE1Q7Z6Z7 4374 aaKnown RBP0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 USP9YO00507 2555 aaPredicted RBP0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 NHSL1Q5SYE7 1610 aa0.42□□□□□ -2.34
LSM6P2-201ENST00000552208 IQSEC2Q5JU85 1478 aa0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 ABCA13Q86UQ4 5058 aa0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 H0Y9P7 68 aa0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 H3BQF6 201 aa0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 WFDC2Q14508 124 aa0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 V9GYS6 101 aa0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 FASNP49327 2511 aaKnown RBP0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 PDCD11Q14690 1871 aaKnown RBP0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 CELSR3Q9NYQ7 3312 aa0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 ATP10BO94823 1461 aa0.41□□□□□ -2.34
LSM6P2-201ENST00000552208 AKAP13Q12802 2813 aa0.4□□□□□ -2.35
LSM6P2-201ENST00000552208 SPINK1P00995 79 aa0.4□□□□□ -2.35
LSM6P2-201ENST00000552208 DEFB107AQ8IZN7 70 aa0.4□□□□□ -2.35
LSM6P2-201ENST00000552208 PSENENQ9NZ42 101 aa0.4□□□□□ -2.35
LSM6P2-201ENST00000552208 A0A0C4DFX4 3053 aa0.4□□□□□ -2.35
LSM6P2-201ENST00000552208 EPPK1P58107 5090 aaKnown RBP0.4□□□□□ -2.35
LSM6P2-201ENST00000552208 KMT2AQ03164 3969 aa0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 STAB2Q8WWQ8 2551 aa0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 GCN1Q92616 2671 aaKnown RBP0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 F8WEM9 126 aa0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 HMGN3Q15651 99 aa0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 ETDBQ3ZM63 59 aa0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 Q5VSD8 79 aa0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 C6orf201Q7Z4U5 140 aa0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 BAZ1AQ9NRL2 1556 aaPredicted RBP0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 KALRNO60229 2985 aa0.39□□□□□ -2.35
LSM6P2-201ENST00000552208 A0A0G2JMZ2 1700 aa0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 PLCE1Q9P212 2302 aa0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 FAT2Q9NYQ8 4349 aa0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 Q9H521 79 aa0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 FLNCQ14315 2725 aa0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 MYO9AB2RTY4 2548 aa0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 MON2Q7Z3U7 1717 aa0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 TARBP1Q13395 1621 aaKnown RBP0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 EDC4Q6P2E9 1401 aaKnown RBP0.38□□□□□ -2.35
LSM6P2-201ENST00000552208 CELSR1Q9NYQ6 3014 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms