RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 NCR3O14931 201 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 ZNF625Q96I27 306 aaPredicted RBP4.34□□□□□ -1.71
LINC02388-201ENST00000550678 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 SPEGQ15772 3267 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 FSHBP01225 129 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 RNASE13Q5GAN3 156 aaKnown RBP4.33□□□□□ -1.72
LINC02388-201ENST00000550678 FAM74A4Q5TZK3 123 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 DPM3Q9P2X0 92 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 AHCTF1Q8WYP5 2266 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 MUC3AQ02505 3323 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 H0YGX0 51 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 CASC10Q5T4H9 136 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 TMEM254Q8TBM7 123 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
LINC02388-201ENST00000550678 CADP27708 2225 aa4.32□□□□□ -1.72
LINC02388-201ENST00000550678 LRCOL1A6NCL2 159 aa4.32□□□□□ -1.72
LINC02388-201ENST00000550678 KLK9Q2XQG4 91 aa4.32□□□□□ -1.72
LINC02388-201ENST00000550678 LINC01560Q8TB33 94 aa4.32□□□□□ -1.72
LINC02388-201ENST00000550678 CAMK2N2Q96S95 79 aa4.32□□□□□ -1.72
LINC02388-201ENST00000550678 CDKN2A-AS1Q9UH64 79 aa4.32□□□□□ -1.72
LINC02388-201ENST00000550678 KLK9Q9UKQ9 250 aa4.32□□□□□ -1.72
LINC02388-201ENST00000550678 DEFB1P60022 68 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 FDCSPQ8NFU4 85 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.31□□□□□ -1.72
LINC02388-201ENST00000550678 ZFHX3Q15911 3703 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 VPS13AQ96RL7 3174 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 LAMA1P25391 3075 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 LOC101927531A0A1B0GV80 90 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 LECT2O14960 151 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 MIR7-3HGQ8N6C7 128 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 ORMDL1Q9P0S3 153 aa4.31□□□□□ -1.72
LINC02388-201ENST00000550678 IGKV2-29A2NJV5 120 aaPredicted RBP4.3□□□□□ -1.72
LINC02388-201ENST00000550678 CYSRT1A8MQ03 144 aa4.3□□□□□ -1.72
LINC02388-201ENST00000550678 PROK1P58294 105 aa4.3□□□□□ -1.72
LINC02388-201ENST00000550678 Q6ZQT0 140 aa4.3□□□□□ -1.72
LINC02388-201ENST00000550678 SMIM11BQ8TCY0 68 aa4.3□□□□□ -1.72
LINC02388-201ENST00000550678 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
LINC02388-201ENST00000550678 CACNA1EQ15878 2313 aa4.3□□□□□ -1.72
LINC02388-201ENST00000550678 COL27A1Q8IZC6 1860 aaPredicted RBP4.3□□□□□ -1.72
LINC02388-201ENST00000550678 CFAP54Q96N23 3096 aa4.3□□□□□ -1.72
LINC02388-201ENST00000550678 JMJD7-PLA2G4BH0Y9G9 81 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 LINC00467Q9BRT7 94 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 CHCHD7Q9BUK0 85 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 WDFY3Q8IZQ1 3526 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 TECTAO75443 2155 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 TRAV10A0A0B4J240 114 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 K7ERS5 55 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 SLPIP03973 132 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 LINC01547P58512 204 aaPredicted RBP4.29□□□□□ -1.72
LINC02388-201ENST00000550678 COX6A2Q02221 97 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 C7orf33Q8WU49 177 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 PRR15LQ9BU68 103 aa4.29□□□□□ -1.72
LINC02388-201ENST00000550678 ICE1Q9Y2F5 2266 aa4.28□□□□□ -1.72
LINC02388-201ENST00000550678 IGKV2-28A0A075B6P5 120 aa4.28□□□□□ -1.72
LINC02388-201ENST00000550678 IGKV2D-28P01615 120 aa4.28□□□□□ -1.72
LINC02388-201ENST00000550678 TMEM105Q8N8V8 129 aa4.28□□□□□ -1.72
LINC02388-201ENST00000550678 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
LINC02388-201ENST00000550678 MYO15AQ9UKN7 3530 aa4.28□□□□□ -1.72
LINC02388-201ENST00000550678 CACNA1GO43497 2377 aa4.28□□□□□ -1.72
LINC02388-201ENST00000550678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.27□□□□□ -1.73
LINC02388-201ENST00000550678 IGHV4-30-2A0A087WSY4 118 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 SMIM1B2RUZ4 78 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
LINC02388-201ENST00000550678 ODF3BA8MYP8 253 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 P0C880 135 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 MIR22HGQ0VDD5 57 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 MINOS1Q5TGZ0 78 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 LINC00167Q96N53 147 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 MUC6Q6W4X9 2439 aa4.27□□□□□ -1.73
LINC02388-201ENST00000550678 URB1O60287 2271 aaKnown RBP4.26□□□□□ -1.73
LINC02388-201ENST00000550678 Q8N9W7 124 aa4.26□□□□□ -1.73
LINC02388-201ENST00000550678 TRIOO75962 3097 aa4.26□□□□□ -1.73
LINC02388-201ENST00000550678 RTL8CO15255 209 aa4.25□□□□□ -1.73
LINC02388-201ENST00000550678 MSMBP08118 114 aa4.25□□□□□ -1.73
LINC02388-201ENST00000550678 PIEZO1Q92508 2521 aa4.25□□□□□ -1.73
LINC02388-201ENST00000550678 FREM2Q5SZK8 3169 aa4.25□□□□□ -1.73
LINC02388-201ENST00000550678 IGHV3-73A0A0B4J1V6 119 aa4.25□□□□□ -1.73
LINC02388-201ENST00000550678 CSAG1Q6PB30 78 aa4.25□□□□□ -1.73
LINC02388-201ENST00000550678 Q8NAQ8 132 aa4.25□□□□□ -1.73
LINC02388-201ENST00000550678 FRYLO94915 3013 aa4.25□□□□□ -1.73
LINC02388-201ENST00000550678 WNK2Q9Y3S1 2297 aa4.24□□□□□ -1.73
LINC02388-201ENST00000550678 IGLV8-61A0A075B6I0 122 aa4.24□□□□□ -1.73
LINC02388-201ENST00000550678 HIGD2BQ4VC39 106 aa4.24□□□□□ -1.73
LINC02388-201ENST00000550678 A0A1W2PNU3 283 aaPredicted RBP4.23□□□□□ -1.73
LINC02388-201ENST00000550678 G3V318 75 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 NDUFA4O00483 81 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 NREPQ16612 68 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 Q6ZR54 194 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 Q6ZTI0 123 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 CIRBP-AS1Q8TBR5 109 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 IGKV3-7A0A075B6H7 116 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 LYNX1G3V0Z9 82 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 LYNX1P0DP58 116 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 CCL18P55774 89 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 FAM215AQ9Y5M1 114 aa4.23□□□□□ -1.73
LINC02388-201ENST00000550678 HAMPP81172 84 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms