RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 MAGI2Q86UL8 1455 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 TMEM131LA2VDJ0 1609 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 DEPDC5O75140 1603 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 NCOR2Q9Y618 2525 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 DNAH14Q0VDD8 3507 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 ZNF236Q9UL36 1845 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 ITSN2Q9NZM3 1697 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 ABCC3O15438 1527 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 ATP10BO94823 1461 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 C10orf142B7Z368 130 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 ATOX1O00244 68 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 BAGE2Q86Y30 109 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 Q9H521 79 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 LINC01558Q9Y6Z2 57 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 IGSF10Q6WRI0 2623 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 CEP250Q9BV73 2442 aa1.27□□□□□ -2.21
USP15-213ENST00000549268 SMG1Q96Q15 3661 aaKnown RBP1.27□□□□□ -2.21
USP15-213ENST00000549268 TNRC6CQ9HCJ0 1690 aaKnown RBP1.26□□□□□ -2.21
USP15-213ENST00000549268 NBEAL2Q6ZNJ1 2754 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 USP32Q8NFA0 1604 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 ADAMTS12P58397 1594 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 STAB1Q9NY15 2570 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.26□□□□□ -2.21
USP15-213ENST00000549268 TLN1Q9Y490 2541 aaKnown RBP1.26□□□□□ -2.21
USP15-213ENST00000549268 SPG11Q96JI7 2443 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 LOC400499M0QZD8 3231 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 G3V318 75 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 UQCR11O14957 56 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 SFT2D2O95562 160 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 APOC3P02656 99 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 IGLC1P0CG04 106 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 TRAPPC2P0DI81 140 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 TRAPPC2BP0DI82 140 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 GCHFRP30047 84 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 FAIMQ9NVQ4 179 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 ARL2-SNX15V9GYD0 113 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 V9GYS6 101 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 MYO15AQ9UKN7 3530 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 ATRQ13535 2644 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 MARF1Q9Y4F3 1742 aaKnown RBP1.26□□□□□ -2.21
USP15-213ENST00000549268 COL12A1Q99715 3063 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 COL4A6Q14031 1691 aa1.26□□□□□ -2.21
USP15-213ENST00000549268 TIAM1Q13009 1591 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 CFAP74Q9C0B2 1584 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 PLEKHH2Q8IVE3 1493 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 CNOT1A5YKK6 2376 aaKnown RBP1.25□□□□□ -2.21
USP15-213ENST00000549268 PDZD2O15018 2839 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 A0A0D9SG42 100 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 A0A0G2JND7 137 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 NDUFC1O43677 76 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 FAM223AQ8IWN6 122 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 PRR15LQ9BU68 103 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 NXT2Q9NPJ8 142 aaKnown RBP1.25□□□□□ -2.21
USP15-213ENST00000549268 SPTA1P02549 2419 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 AGLP35573 1532 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 MAP3K1Q13233 1512 aa1.25□□□□□ -2.21
USP15-213ENST00000549268 TRIOO75962 3097 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 MYO7AQ13402 2215 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 RGPD3A6NKT7 1758 aaPredicted RBP1.24□□□□□ -2.21
USP15-213ENST00000549268 RGPD4Q7Z3J3 1758 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 JMJD1CQ15652 2540 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 CCDC168Q8NDH2 2452 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 FREM2Q5SZK8 3169 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 ZC3H13Q5T200 1668 aaKnown RBP1.24□□□□□ -2.21
USP15-213ENST00000549268 SERP2Q8N6R1 65 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 SMIM4Q8WVI0 70 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 CACFD1Q9UGQ2 172 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 PREX2Q70Z35 1606 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 ABCA9Q8IUA7 1624 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 ABCA5Q8WWZ7 1642 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 DMDP11532 3685 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 DIP2CQ9Y2E4 1556 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 ATP7AQ04656 1500 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 NEXMIFQ5QGS0 1516 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 LRBAP50851 2863 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 NIPBLQ6KC79 2804 aaeCLIP1.24□□□□□ -2.21
USP15-213ENST00000549268 CCDC88BA6NC98 1476 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 MLH3Q9UHC1 1453 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 CENPEQ02224 2701 aa1.24□□□□□ -2.21
USP15-213ENST00000549268 NAV3Q8IVL0 2385 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 UACAQ9BZF9 1416 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 TRBV7-7A0A0K0K1E9 115 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 H7BZZ5 65 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 FAUP35544 74 aaKnown RBP1.23□□□□□ -2.21
USP15-213ENST00000549268 DEFB123Q8N688 67 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 LINC00472Q9H8W2 130 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 NPVFQ9HCQ7 196 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 ABCC1P33527 1531 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 CHD7Q9P2D1 2997 aa1.23□□□□□ -2.21
USP15-213ENST00000549268 MROH1Q8NDA8 1641 aa1.22□□□□□ -2.21
USP15-213ENST00000549268 SAMD9LQ8IVG5 1584 aa1.22□□□□□ -2.21
USP15-213ENST00000549268 UTP20O75691 2785 aaKnown RBP1.22□□□□□ -2.21
USP15-213ENST00000549268 MTORP42345 2549 aa1.22□□□□□ -2.21
USP15-213ENST00000549268 RIF1Q5UIP0 2472 aaKnown RBP1.22□□□□□ -2.21
USP15-213ENST00000549268 ASIPP42127 132 aa1.22□□□□□ -2.21
USP15-213ENST00000549268 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
USP15-213ENST00000549268 COX17Q14061 63 aa1.22□□□□□ -2.21
USP15-213ENST00000549268 C9orf62Q8N4C0 152 aa1.22□□□□□ -2.21
USP15-213ENST00000549268 TRGV9Q99603 122 aa1.22□□□□□ -2.21
USP15-213ENST00000549268 PKD1L3Q7Z443 1732 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms