RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 KDM3BQ7LBC6 1761 aa0.84□□□□□ -2.27
CNOT2-215ENST00000548863 H3BVH4 76 aa0.84□□□□□ -2.27
CNOT2-215ENST00000548863 SMIM5Q71RC9 77 aa0.84□□□□□ -2.27
CNOT2-215ENST00000548863 SPRR4Q96PI1 79 aa0.84□□□□□ -2.27
CNOT2-215ENST00000548863 TARBP1Q13395 1621 aaKnown RBP0.84□□□□□ -2.28
CNOT2-215ENST00000548863 LAMA4Q16363 1823 aa0.84□□□□□ -2.28
CNOT2-215ENST00000548863 ZMYM4Q5VZL5 1548 aa0.84□□□□□ -2.28
CNOT2-215ENST00000548863 LOC285556D6RIA3 1793 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 TRBV7-4A0A0J9YYF1 115 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 TRBV30A0A0K0K1B3 111 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 A0A1B0GUT8 65 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 H0Y9P7 68 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 C3orf79P0CE67 100 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 UNQ6190/PRO20217Q6UXQ8 127 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 TMEM263Q8WUH6 116 aaKnown RBP0.83□□□□□ -2.28
CNOT2-215ENST00000548863 LINC00472Q9H8W2 130 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 PLAC8Q9NZF1 115 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 GNG13Q9P2W3 67 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 NKTRP30414 1462 aaKnown RBP0.83□□□□□ -2.28
CNOT2-215ENST00000548863 ATP7BP35670 1465 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 SIPA1L3O60292 1781 aaPredicted RBP0.83□□□□□ -2.28
CNOT2-215ENST00000548863 ARFGEF2Q9Y6D5 1785 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 TIAM1Q13009 1591 aa0.83□□□□□ -2.28
CNOT2-215ENST00000548863 TNRC6BQ9UPQ9 1833 aaKnown RBP0.82□□□□□ -2.28
CNOT2-215ENST00000548863 PREX2Q70Z35 1606 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 CCDC180Q9P1Z9 1646 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 MYO7BQ6PIF6 2116 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 C1orf167Q5SNV9 1468 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 RGPD1P0DJD0 1748 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 IFT172Q9UG01 1749 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 NCR3O14931 201 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 S100A3P33764 101 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 SPINK7P58062 85 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 C10orf113Q5VZT2 155 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 SPATA8Q6RVD6 105 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 C10orf99Q6UWK7 81 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.82□□□□□ -2.28
CNOT2-215ENST00000548863 URB2Q14146 1524 aaKnown RBP0.82□□□□□ -2.28
CNOT2-215ENST00000548863 CEP170BQ9Y4F5 1589 aaPredicted RBP0.82□□□□□ -2.28
CNOT2-215ENST00000548863 ITSN1Q15811 1721 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 CD163L1Q9NR16 1453 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 LMTK2Q8IWU2 1503 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 ZNF236Q9UL36 1845 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 FXYD6-FXYD2A0A087WZ82 144 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 NDUFB1O75438 58 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 PRB3Q04118 309 aaPredicted RBP0.81□□□□□ -2.28
CNOT2-215ENST00000548863 ATXN8Q156A1 80 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 Q6ZRX8 168 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 SMIM11BQ8TCY0 68 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 PLAC4Q8WY50 150 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 PLXNC1O60486 1568 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 CDC42BPGQ6DT37 1551 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 INTS1Q8N201 2190 aaKnown RBP0.81□□□□□ -2.28
CNOT2-215ENST00000548863 PIK3C2BO00750 1634 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 ABCA9Q8IUA7 1624 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 RAPGEF6Q8TEU7 1601 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 SHPRHQ149N8 1683 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 NUP188Q5SRE5 1749 aa0.81□□□□□ -2.28
CNOT2-215ENST00000548863 DNAJC13O75165 2243 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 ALKQ9UM73 1620 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 A0A096LNT2 108 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 GVQW2A0A096LPI5 108 aaPredicted RBP0.8□□□□□ -2.28
CNOT2-215ENST00000548863 TRAV21A0A0B4J279 112 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 TRBV6-1A0A0K0K1D8 114 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 IFI6P09912 130 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 HAMPP81172 84 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 SPINK13Q1W4C9 94 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 LINC00575Q6W349 94 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 FAM103A1Q9BTL3 118 aaKnown RBP0.8□□□□□ -2.28
CNOT2-215ENST00000548863 E9PCH4 1651 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 CRYBG1Q9Y4K1 1723 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 MED13LQ71F56 2210 aa0.8□□□□□ -2.28
CNOT2-215ENST00000548863 LRP6O75581 1613 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 NHSL1Q5SYE7 1610 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 C5P01031 1676 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 A0A1B0GU69 56 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 G3V318 75 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 LY6G6CO95867 125 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 HMGA1P17096 107 aaKnown RBP0.79□□□□□ -2.28
CNOT2-215ENST00000548863 NREPQ16612 68 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 DEFB112Q30KQ8 113 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 WFDC9Q8NEX5 89 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 GAFA1Q96PS6 74 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 RALGAPBQ86X10 1494 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 DIP2AQ14689 1571 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 SAMD9Q5K651 1589 aa0.79□□□□□ -2.28
CNOT2-215ENST00000548863 ABCA1O95477 2261 aa0.78□□□□□ -2.28
CNOT2-215ENST00000548863 LRRC37A2A6NM11 1700 aa0.78□□□□□ -2.28
CNOT2-215ENST00000548863 NOTCH1P46531 2555 aa0.78□□□□□ -2.28
CNOT2-215ENST00000548863 NCOA6Q14686 2063 aaPredicted RBP0.78□□□□□ -2.28
CNOT2-215ENST00000548863 PIN1P1O15428 100 aa0.78□□□□□ -2.28
CNOT2-215ENST00000548863 RPL37P61927 97 aaKnown RBP0.78□□□□□ -2.28
CNOT2-215ENST00000548863 SSBP3-AS1Q7Z2R9 100 aa0.78□□□□□ -2.28
CNOT2-215ENST00000548863 ANKRD50Q9ULJ7 1429 aa0.78□□□□□ -2.28
CNOT2-215ENST00000548863 PRXQ9BXM0 1461 aa0.78□□□□□ -2.28
CNOT2-215ENST00000548863 LRRC7Q96NW7 1537 aa0.78□□□□□ -2.28
CNOT2-215ENST00000548863 PAPPAQ13219 1627 aa0.78□□□□□ -2.29
CNOT2-215ENST00000548863 USP32Q8NFA0 1604 aa0.78□□□□□ -2.29
CNOT2-215ENST00000548863 PLCH1Q4KWH8 1693 aa0.78□□□□□ -2.29
CNOT2-215ENST00000548863 PREX1Q8TCU6 1659 aa0.78□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms