RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TRAPPC2P0DI81 140 aa-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 TRAPPC2BP0DI82 140 aa-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 UBA52P62987 128 aaKnown RBP-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 KRTAP19-7Q3SYF9 63 aa-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 LINC01600Q96MT4 127 aa-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 LINC00846Q9NV44 126 aa-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 PRKDCP78527 4128 aaKnown RBP-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 ZFYVE16Q7Z3T8 1539 aa-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 COL6A3P12111 3177 aa-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 EP300Q09472 2414 aaPredicted RBP-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 EDC4Q6P2E9 1401 aaKnown RBP-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 KIAA1551Q9HCM1 1747 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 PEG3Q9GZU2 1588 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 SPINK4O60575 86 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 KRTDAPP60985 99 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 USMG5Q96IX5 58 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 C12orf57Q99622 126 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 NBEAL1Q6ZS30 2694 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 SETXQ7Z333 2677 aaKnown RBP-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 CHD8Q9HCK8 2581 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 PDZD2O15018 2839 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 IQSEC2Q5JU85 1478 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 NCOA3Q9Y6Q9 1424 aa-0.3□□□□□ -2.46
LEMD3-206ENST00000545026 A0A1B0GWA3 101 aa-0.31□□□□□ -2.46
LEMD3-206ENST00000545026 CRYM-AS1A6NIL9 109 aa-0.31□□□□□ -2.46
LEMD3-206ENST00000545026 COX8AP10176 69 aa-0.31□□□□□ -2.46
LEMD3-206ENST00000545026 PLEKHH2Q8IVE3 1493 aa-0.31□□□□□ -2.46
LEMD3-206ENST00000545026 NLRP1Q9C000 1473 aa-0.31□□□□□ -2.46
LEMD3-206ENST00000545026 CNOT1A5YKK6 2376 aaKnown RBP-0.31□□□□□ -2.46
LEMD3-206ENST00000545026 COL4A6Q14031 1691 aa-0.31□□□□□ -2.46
LEMD3-206ENST00000545026 URB1O60287 2271 aaKnown RBP-0.31□□□□□ -2.46
LEMD3-206ENST00000545026 LRRC37AA6NMS7 1700 aa-0.32□□□□□ -2.46
LEMD3-206ENST00000545026 SHPRHQ149N8 1683 aa-0.32□□□□□ -2.46
LEMD3-206ENST00000545026 S100A1P23297 94 aa-0.32□□□□□ -2.46
LEMD3-206ENST00000545026 GNG8Q9UK08 70 aa-0.32□□□□□ -2.46
LEMD3-206ENST00000545026 TARBP1Q13395 1621 aaKnown RBP-0.32□□□□□ -2.46
LEMD3-206ENST00000545026 PAPPA2Q9BXP8 1791 aa-0.32□□□□□ -2.46
LEMD3-206ENST00000545026 CREBBPQ92793 2442 aa-0.33□□□□□ -2.46
LEMD3-206ENST00000545026 LOC730098B7Z3J9 87 aa-0.33□□□□□ -2.46
LEMD3-206ENST00000545026 TMEM262E9PQX1 116 aa-0.33□□□□□ -2.46
LEMD3-206ENST00000545026 SYS1-DBNDD2H3BUS1 97 aa-0.33□□□□□ -2.46
LEMD3-206ENST00000545026 FDCSPQ8NFU4 85 aa-0.33□□□□□ -2.46
LEMD3-206ENST00000545026 CGREF1Q99674 301 aa-0.33□□□□□ -2.46
LEMD3-206ENST00000545026 DNAJC13O75165 2243 aa-0.33□□□□□ -2.46
LEMD3-206ENST00000545026 ABCC5O15440 1437 aa-0.34□□□□□ -2.46
LEMD3-206ENST00000545026 GTF2H5Q6ZYL4 71 aa-0.34□□□□□ -2.46
LEMD3-206ENST00000545026 PRDM15P57071 1507 aaPredicted RBP-0.34□□□□□ -2.46
LEMD3-206ENST00000545026 FMN2Q9NZ56 1722 aa-0.35□□□□□ -2.47
LEMD3-206ENST00000545026 NDUFC1O43677 76 aa-0.35□□□□□ -2.47
LEMD3-206ENST00000545026 DEFB105AQ8NG35 78 aa-0.35□□□□□ -2.47
LEMD3-206ENST00000545026 LCN9Q8WX39 176 aa-0.35□□□□□ -2.47
LEMD3-206ENST00000545026 FXYD6Q9H0Q3 95 aa-0.35□□□□□ -2.47
LEMD3-206ENST00000545026 ABCC2Q92887 1545 aa-0.35□□□□□ -2.47
LEMD3-206ENST00000545026 PDCD11Q14690 1871 aaKnown RBP-0.35□□□□□ -2.47
LEMD3-206ENST00000545026 NKTRP30414 1462 aaKnown RBP-0.35□□□□□ -2.47
LEMD3-206ENST00000545026 NF1P21359 2839 aa-0.36□□□□□ -2.47
LEMD3-206ENST00000545026 M0R2T5 61 aa-0.36□□□□□ -2.47
LEMD3-206ENST00000545026 SEC11AP67812 179 aa-0.36□□□□□ -2.47
LEMD3-206ENST00000545026 HSD52Q0P140 79 aa-0.36□□□□□ -2.47
LEMD3-206ENST00000545026 SFTA2Q6UW10 78 aa-0.36□□□□□ -2.47
LEMD3-206ENST00000545026 SETD2Q9BYW2 2564 aaPredicted RBP-0.36□□□□□ -2.47
LEMD3-206ENST00000545026 MARF1Q9Y4F3 1742 aaKnown RBP-0.36□□□□□ -2.47
LEMD3-206ENST00000545026 MLH3Q9UHC1 1453 aa-0.36□□□□□ -2.47
LEMD3-206ENST00000545026 A0A087WVE0 104 aa-0.37□□□□□ -2.47
LEMD3-206ENST00000545026 H3BQF6 201 aa-0.37□□□□□ -2.47
LEMD3-206ENST00000545026 SNCAP37840 140 aa-0.37□□□□□ -2.47
LEMD3-206ENST00000545026 VAMP8Q9BV40 100 aa-0.37□□□□□ -2.47
LEMD3-206ENST00000545026 FYCO1Q9BQS8 1478 aa-0.37□□□□□ -2.47
LEMD3-206ENST00000545026 TGP01266 2768 aa-0.37□□□□□ -2.47
LEMD3-206ENST00000545026 C5P01031 1676 aa-0.37□□□□□ -2.47
LEMD3-206ENST00000545026 CUX1P39880 1505 aa-0.38□□□□□ -2.47
LEMD3-206ENST00000545026 A0A1B0GU69 56 aa-0.38□□□□□ -2.47
LEMD3-206ENST00000545026 hADV29S1A0JD25 119 aa-0.38□□□□□ -2.47
LEMD3-206ENST00000545026 C20orf202A1L168 122 aa-0.38□□□□□ -2.47
LEMD3-206ENST00000545026 RAPGEF2Q9Y4G8 1499 aa-0.38□□□□□ -2.47
LEMD3-206ENST00000545026 PKHD1P08F94 4074 aa-0.38□□□□□ -2.47
LEMD3-206ENST00000545026 FLGP20930 4061 aaPredicted RBP-0.38□□□□□ -2.47
LEMD3-206ENST00000545026 SVEP1Q4LDE5 3571 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 HERC1Q15751 4861 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 PCNX1Q96RV3 2341 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 TRBV25-1A0A075B6N4 114 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 H0Y9P7 68 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 MPC2O95563 127 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 KRTAP19-8Q3LI54 63 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 C6orf201Q7Z4U5 140 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 KNDC1Q76NI1 1749 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 MON2Q7Z3U7 1717 aa-0.39□□□□□ -2.47
LEMD3-206ENST00000545026 MXRA5Q9NR99 2828 aa-0.4□□□□□ -2.47
LEMD3-206ENST00000545026 PSMG4Q5JS54 123 aa-0.4□□□□□ -2.47
LEMD3-206ENST00000545026 SLIT1O75093 1534 aa-0.4□□□□□ -2.47
LEMD3-206ENST00000545026 EPRSP07814 1512 aaKnown RBP-0.4□□□□□ -2.47
LEMD3-206ENST00000545026 LAMA5O15230 3695 aa-0.4□□□□□ -2.47
LEMD3-206ENST00000545026 KMT2CQ8NEZ4 4911 aaKnown RBP-0.4□□□□□ -2.47
LEMD3-206ENST00000545026 SAMD9Q5K651 1589 aa-0.4□□□□□ -2.47
LEMD3-206ENST00000545026 A0A0G2JND7 137 aa-0.41□□□□□ -2.48
LEMD3-206ENST00000545026 C7orf77A4D0Y5 90 aa-0.41□□□□□ -2.48
LEMD3-206ENST00000545026 H7BZZ5 65 aa-0.41□□□□□ -2.48
LEMD3-206ENST00000545026 PMCHL1Q16048 86 aa-0.41□□□□□ -2.48
LEMD3-206ENST00000545026 KLK9Q2XQG4 91 aa-0.41□□□□□ -2.48
LEMD3-206ENST00000545026 CACFD1Q9UGQ2 172 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms