RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SPANXCQ9NY87 97 aa9.59□□□□□ -0.87
ACTN1-205ENST00000538545 TEX48A0A1B0GUV7 120 aa9.59□□□□□ -0.87
ACTN1-205ENST00000538545 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
ACTN1-205ENST00000538545 SPATA25Q9BR10 227 aa9.59□□□□□ -0.87
ACTN1-205ENST00000538545 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
ACTN1-205ENST00000538545 LINC00308Q8TCZ7 52 aa9.58□□□□□ -0.88
ACTN1-205ENST00000538545 GTF2H5Q6ZYL4 71 aa9.58□□□□□ -0.88
ACTN1-205ENST00000538545 C9orf116Q5BN46 136 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-205ENST00000538545 MIR7-3HGQ8N6C7 128 aa9.57□□□□□ -0.88
ACTN1-205ENST00000538545 CSMD3Q7Z407 3707 aa9.57□□□□□ -0.88
ACTN1-205ENST00000538545 Q1RN00 199 aa9.57□□□□□ -0.88
ACTN1-205ENST00000538545 C6orf223Q8N319 242 aa9.57□□□□□ -0.88
ACTN1-205ENST00000538545 GAGE12HA6NDE8 117 aa9.56□□□□□ -0.88
ACTN1-205ENST00000538545 LINC00158P58513 81 aa9.56□□□□□ -0.88
ACTN1-205ENST00000538545 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
ACTN1-205ENST00000538545 PRKDCP78527 4128 aaKnown RBP9.56□□□□□ -0.88
ACTN1-205ENST00000538545 PSMB2P49721 201 aa9.56□□□□□ -0.88
ACTN1-205ENST00000538545 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
ACTN1-205ENST00000538545 FOXI1Q12951 378 aa9.55□□□□□ -0.88
ACTN1-205ENST00000538545 COX7A2LO14548 114 aa9.55□□□□□ -0.88
ACTN1-205ENST00000538545 MALP21145 153 aa9.55□□□□□ -0.88
ACTN1-205ENST00000538545 SCGB1C2P0DMR2 95 aa9.54□□□□□ -0.88
ACTN1-205ENST00000538545 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
ACTN1-205ENST00000538545 TIMM17BO60830 172 aa9.53□□□□□ -0.88
ACTN1-205ENST00000538545 TCL1BO95988 128 aa9.53□□□□□ -0.88
ACTN1-205ENST00000538545 WFDC2Q14508 124 aa9.53□□□□□ -0.88
ACTN1-205ENST00000538545 SH2D6Q7Z4S9 175 aa9.53□□□□□ -0.88
ACTN1-205ENST00000538545 A0A0B4J2C4 111 aa9.53□□□□□ -0.88
ACTN1-205ENST00000538545 KIAA0087Q14695 138 aa9.53□□□□□ -0.88
ACTN1-205ENST00000538545 C10orf25Q5T742 122 aa9.52□□□□□ -0.88
ACTN1-205ENST00000538545 PRR34Q9NV39 138 aa9.52□□□□□ -0.88
ACTN1-205ENST00000538545 HERV-K104P63124 156 aa9.52□□□□□ -0.89
ACTN1-205ENST00000538545 DNAH7Q8WXX0 4024 aa9.52□□□□□ -0.89
ACTN1-205ENST00000538545 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-205ENST00000538545 RPL13AP40429 203 aaKnown RBP9.51□□□□□ -0.89
ACTN1-205ENST00000538545 MEGF8Q7Z7M0 2845 aa9.51□□□□□ -0.89
ACTN1-205ENST00000538545 TRIAP1O43715 76 aa9.51□□□□□ -0.89
ACTN1-205ENST00000538545 CRPP02741 224 aa9.51□□□□□ -0.89
ACTN1-205ENST00000538545 DNAH10Q8IVF4 4471 aa9.51□□□□□ -0.89
ACTN1-205ENST00000538545 H3BNG1 76 aa9.5□□□□□ -0.89
ACTN1-205ENST00000538545 CKS1BP61024 79 aa9.5□□□□□ -0.89
ACTN1-205ENST00000538545 Q9HAA7 133 aa9.5□□□□□ -0.89
ACTN1-205ENST00000538545 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
ACTN1-205ENST00000538545 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
ACTN1-205ENST00000538545 PRR3P79522 188 aaKnown RBP9.49□□□□□ -0.89
ACTN1-205ENST00000538545 Q8IZM0 81 aa9.49□□□□□ -0.89
ACTN1-205ENST00000538545 TRAV10A0A0B4J240 114 aa9.49□□□□□ -0.89
ACTN1-205ENST00000538545 IFITM1P13164 125 aa9.49□□□□□ -0.89
ACTN1-205ENST00000538545 CCL18P55774 89 aa9.49□□□□□ -0.89
ACTN1-205ENST00000538545 LINC00588Q9Y4M8 146 aa9.48□□□□□ -0.89
ACTN1-205ENST00000538545 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
ACTN1-205ENST00000538545 SPAG11BQ08648 103 aa9.47□□□□□ -0.89
ACTN1-205ENST00000538545 SND1-IT1Q9HBX3 110 aa9.47□□□□□ -0.89
ACTN1-205ENST00000538545 IGKV2-28A0A075B6P5 120 aa9.46□□□□□ -0.89
ACTN1-205ENST00000538545 IGKV2D-28P01615 120 aa9.46□□□□□ -0.89
ACTN1-205ENST00000538545 SMCPP49901 116 aaPredicted RBP9.46□□□□□ -0.89
ACTN1-205ENST00000538545 ETDBQ3ZM63 59 aa9.46□□□□□ -0.89
ACTN1-205ENST00000538545 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.89
ACTN1-205ENST00000538545 PLECQ15149 4684 aaKnown RBP9.46□□□□□ -0.89
ACTN1-205ENST00000538545 PRO0461Q9UI25 63 aa9.46□□□□□ -0.9
ACTN1-205ENST00000538545 IBA57-AS1B1ANH7 110 aa9.46□□□□□ -0.9
ACTN1-205ENST00000538545 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
ACTN1-205ENST00000538545 RNF151Q2KHN1 245 aa9.44□□□□□ -0.9
ACTN1-205ENST00000538545 KRTAP26-1Q6PEX3 210 aa9.44□□□□□ -0.9
ACTN1-205ENST00000538545 Q8NDZ9 215 aa9.44□□□□□ -0.9
ACTN1-205ENST00000538545 OCIAD2Q56VL3 154 aa9.44□□□□□ -0.9
ACTN1-205ENST00000538545 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
ACTN1-205ENST00000538545 TGP01266 2768 aa9.42□□□□□ -0.9
ACTN1-205ENST00000538545 DNAH1Q9P2D7 4330 aa9.42□□□□□ -0.9
ACTN1-205ENST00000538545 C9JAW5 83 aa9.41□□□□□ -0.9
ACTN1-205ENST00000538545 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
ACTN1-205ENST00000538545 STARD9Q9P2P6 4700 aa9.41□□□□□ -0.9
ACTN1-205ENST00000538545 TRBV30A0A0K0K1B3 111 aa9.41□□□□□ -0.9
ACTN1-205ENST00000538545 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
ACTN1-205ENST00000538545 KLK5Q9Y337 293 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-205ENST00000538545 OR13C6PQ8NH95 151 aa9.4□□□□□ -0.9
ACTN1-205ENST00000538545 F8W1H4 67 aa9.4□□□□□ -0.91
ACTN1-205ENST00000538545 LECT2O14960 151 aa9.4□□□□□ -0.91
ACTN1-205ENST00000538545 C15orf56Q8N910 161 aa9.4□□□□□ -0.91
ACTN1-205ENST00000538545 XAGE1AQ9HD64 81 aa9.4□□□□□ -0.91
ACTN1-205ENST00000538545 TRAV8-4A0A0B4J246 113 aa9.39□□□□□ -0.91
ACTN1-205ENST00000538545 LINC01561Q8N1V8 128 aa9.39□□□□□ -0.91
ACTN1-205ENST00000538545 C6orf48Q9UBA6 75 aa9.39□□□□□ -0.91
ACTN1-205ENST00000538545 C15orf53Q8NAA6 179 aa9.38□□□□□ -0.91
ACTN1-205ENST00000538545 B9D2Q9BPU9 175 aa9.38□□□□□ -0.91
ACTN1-205ENST00000538545 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
ACTN1-205ENST00000538545 FAM218AQ96MZ4 157 aa9.37□□□□□ -0.91
ACTN1-205ENST00000538545 TRBV20-1A0A075B6N2 111 aa9.37□□□□□ -0.91
ACTN1-205ENST00000538545 ZNF561-AS1K7EIQ3 104 aa9.37□□□□□ -0.91
ACTN1-205ENST00000538545 NCR3O14931 201 aa9.37□□□□□ -0.91
ACTN1-205ENST00000538545 LYRM7Q5U5X0 104 aa9.37□□□□□ -0.91
ACTN1-205ENST00000538545 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-205ENST00000538545 Q6ZRU5 148 aa9.37□□□□□ -0.91
ACTN1-205ENST00000538545 SMIM11BQ8TCY0 68 aa9.36□□□□□ -0.91
ACTN1-205ENST00000538545 CAMK2N2Q96S95 79 aa9.36□□□□□ -0.91
ACTN1-205ENST00000538545 CXCL5P42830 114 aa9.36□□□□□ -0.91
ACTN1-205ENST00000538545 LINC01620Q4KN68 170 aa9.36□□□□□ -0.91
ACTN1-205ENST00000538545 COPS9Q8WXC6 57 aa9.36□□□□□ -0.91
ACTN1-205ENST00000538545 KRTAP1-5Q9BYS1 174 aa9.36□□□□□ -0.91
ACTN1-205ENST00000538545 SLC25A20O43772 301 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms